PI0016532 (gene) Melon (PI 482460) v1

Overview


Name	PI0016532
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	TF-B3 domain-containing protein
Location	chr04: 2077011 .. 2078572 (+)
RNA-Seq Expression	PI0016532
Synteny	PI0016532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACCACCACAACCCCCACCACCACCACCAAGAACTCCCTCCATTCCCCTCCGCCGCCGTCACCGCCCCCACCATTCTCCACTCTCCTCCACAAAATTCATGTTATCTCCCACCTATTCTCTCCCAAACTTGTTTGGGATCATTTTCCTCTTCAACTCCACAATCATTTTTTTCTCCACATGAACCACAACTACTCGCTCCCCATTTTCCTCATTCTCCCACCTTCCTTAACTATGGGTTCAATGAGCCAAACATTCATTCTGTTTTTCCTAAAGATGATGGAAAAAAGGCTTTGGATGCTTGGAGTACTAAAGTGGCTCGAACTAATAGAAGACTTGCTCGTCAAAGAACCCTTACTTCTTTCACTACGCGAACCTCTTCTTCGTCTTCTTCTTCTTCTTGTGGTTATAATGATGATTATTCTAAGGGTTTAACTATAACCCATTTCCCTAATACTGATTCTTCACATAATAATCGCAATCTTTTCACCTTTTGTACTCCTGATAATAAGGTTTATGATGTTTAATCAAAGTTTTCATTTTTTTTATATATATTGATTATTTTTCCTTTGATTATTGTGTTTTTTTTTTTTTTTTTCTCTTAAGATTTTGAGAATGCTACTGAAGAAGGAGCTGAAGAACAGTGATGTTGGATCTTTGGGCAGGATTGTCCTCCCCAAGGTTTGTATTCTTTTTACCCTTATTTTAGATCTCTCACTCACACTTTTTTTTCCTATTTCAATAGAACAGTGAAAATAAGATAAAACTTTGTCTAAAAAAACATGCAAATGGGAAAAAGAAGAGGAATGAATAACTACAGACCAAAATTACAAAATCCCATTTACCCTCAATCCCTCACCCCCTTTTTCTAACACCTACACACAACAAAATAGGAAAATTTTAACACTAAAAAAGAAACCCTATTATTGTTTTTTTTTTTTTTTTTTTGGTGTAATGAAAAATAAATAAATACAAAACTTTAATCAAATTTCAAACTTTTTTTTCTTTTCTTGTTGTTGCCCTTAGAGATTAACTTCTACCTTATTTGTACACAACTTTAAAATCTGGAAGTAATTACTGCACTAATTATATATATCATCGATCACATTGATCGAATCCCAAACCCGAATAAATAGAAAAGAGAAATTTGAAAATAGGTTAGTAGAATGTTGATTTTCTAATAGACACACTATTTGTTTAATTTGGTGAGAATTTGCAAATGTTGTGCATATATATTATGTATCACAGAGGGAGGCAGAAGAGAACCTTCCATTTCTCACTGATAAGGAAGGTCTACAAATTGTGGTGAGAGATGTGAACTCAAACAGAAGATGGACAATGAAATACAAGTAAGCCCAAAAAAAAATAAACAAAATTATAATTGCTGTTTTAATTAATTAATGGATTCATTGGAAATTTAACACTTATATTTTGTCATAATTAATGAATTAATTAACCCCTTGAAATTCTTGTTGAGTTTAATTAATATAGGTACTGGGCGAACAACAGAAGTAGAATGTATGTTCTGGAGAACACAGGTATCAGTTCTACAAATTAA

mRNA sequence

ATGGATGACCACCACAACCCCCACCACCACCACCAAGAACTCCCTCCATTCCCCTCCGCCGCCGTCACCGCCCCCACCATTCTCCACTCTCCTCCACAAAATTCATGTTATCTCCCACCTATTCTCTCCCAAACTTGTTTGGGATCATTTTCCTCTTCAACTCCACAATCATTTTTTTCTCCACATGAACCACAACTACTCGCTCCCCATTTTCCTCATTCTCCCACCTTCCTTAACTATGGGTTCAATGAGCCAAACATTCATTCTGTTTTTCCTAAAGATGATGGAAAAAAGGCTTTGGATGCTTGGAGTACTAAAGTGGCTCGAACTAATAGAAGACTTGCTCGTCAAAGAACCCTTACTTCTTTCACTACGCGAACCTCTTCTTCGTCTTCTTCTTCTTCTTGTGGTTATAATGATGATTATTCTAAGGGTTTAACTATAACCCATTTCCCTAATACTGATTCTTCACATAATAATCGCAATCTTTTCACCTTTTGTACTCCTGATAATAAGATTTTGAGAATGCTACTGAAGAAGGAGCTGAAGAACAGTGATGTTGGATCTTTGGGCAGGATTGTCCTCCCCAAGAGGGAGGCAGAAGAGAACCTTCCATTTCTCACTGATAAGGAAGGTCTACAAATTGTGGTGAGAGATGTGAACTCAAACAGAAGATGGACAATGAAATACAAGTACTGGGCGAACAACAGAAGTAGAATGTATGTTCTGGAGAACACAGGTATCAGTTCTACAAATTAA

Coding sequence (CDS)

ATGGATGACCACCACAACCCCCACCACCACCACCAAGAACTCCCTCCATTCCCCTCCGCCGCCGTCACCGCCCCCACCATTCTCCACTCTCCTCCACAAAATTCATGTTATCTCCCACCTATTCTCTCCCAAACTTGTTTGGGATCATTTTCCTCTTCAACTCCACAATCATTTTTTTCTCCACATGAACCACAACTACTCGCTCCCCATTTTCCTCATTCTCCCACCTTCCTTAACTATGGGTTCAATGAGCCAAACATTCATTCTGTTTTTCCTAAAGATGATGGAAAAAAGGCTTTGGATGCTTGGAGTACTAAAGTGGCTCGAACTAATAGAAGACTTGCTCGTCAAAGAACCCTTACTTCTTTCACTACGCGAACCTCTTCTTCGTCTTCTTCTTCTTCTTGTGGTTATAATGATGATTATTCTAAGGGTTTAACTATAACCCATTTCCCTAATACTGATTCTTCACATAATAATCGCAATCTTTTCACCTTTTGTACTCCTGATAATAAGATTTTGAGAATGCTACTGAAGAAGGAGCTGAAGAACAGTGATGTTGGATCTTTGGGCAGGATTGTCCTCCCCAAGAGGGAGGCAGAAGAGAACCTTCCATTTCTCACTGATAAGGAAGGTCTACAAATTGTGGTGAGAGATGTGAACTCAAACAGAAGATGGACAATGAAATACAAGTACTGGGCGAACAACAGAAGTAGAATGTATGTTCTGGAGAACACAGGTATCAGTTCTACAAATTAA

Protein sequence

MDDHHNPHHHHQELPPFPSAAVTAPTILHSPPQNSCYLPPILSQTCLGSFSSSTPQSFFSPHEPQLLAPHFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDAWSTKVARTNRRLARQRTLTSFTTRTSSSSSSSSCGYNDDYSKGLTITHFPNTDSSHNNRNLFTFCTPDNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWANNRSRMYVLENTGISSTN

Homology

[Close]

BLAST of PI0016532 vs. ExPASy Swiss-Prot
Match: Q1PFR7 (B3 domain-containing transcription factor LEC2 OS=Arabidopsis thaliana OX=3702 GN=LEC2 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27
Identity = 88/225 (39.11%), Postives = 123/225 (54.67%), Query Frame = 0


Query: 23  TAPTILHSPPQNSCYLPPILSQTCLGSFSSSTPQSFFSPHEPQLLAPHFPHSPTFLNYGF 82
           T PT  H   Q   +LPP        S+      +  +P +P  L+  +P  P       
Sbjct: 31  TVPTYDHHQAQPHHFLPPF-------SYPVEQMAAVMNP-QPVYLSECYPQIPVTQTGSE 90

Query: 83  NEPNIHSVFPKDDGKKALDAWSTKVARTNRRLARQRTLTSFTTRTSSSSSSSSCGYNDDY 142
               + +     +    LD   TK+AR NR+ A  R+        ++SS +SS     D 
Sbjct: 91  FGSLVGNPCLWQERGGFLDPRMTKMARINRKNAMMRS-------RNNSSPNSSPSELVDS 150

Query: 143 SKGLTITHFPNTDSSHNNRNLFTFCTPDNKILRMLLKKELKNSDVGSLGRIVLPKREAEE 202
            + L + +  N     + ++ +   T DNK LR+L +KELKNSDVGSLGRIVLPKR+AE 
Sbjct: 151 KRQLMMLNLKNNVQISDKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEA 210

Query: 203 NLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWANNRSRMYVLENTG 248
           NLP L+DKEG+ + +RDV S + W+ KYK+W+NN+SRMYVLENTG
Sbjct: 211 NLPKLSDKEGIVVQMRDVFSMQSWSFKYKFWSNNKSRMYVLENTG 240

[Close]

BLAST of PI0016532 vs. ExPASy Swiss-Prot
Match: P26307 (Regulatory protein viviparous-1 OS=Zea mays OX=4577 GN=VP1 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-20
Identity = 46/77 (59.74%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 171 NKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKY 230
           +K LR LL+K LK SDVGSLGRIVLPK+EAE +LP L  ++G+ I + D+ ++R W M+Y
Sbjct: 510 DKNLRFLLQKVLKQSDVGSLGRIVLPKKEAEVHLPELKTRDGISIPMEDIGTSRVWNMRY 569

Query: 231 KYWANNRSRMYVLENTG 248
           ++W NN+SRMY+LENTG
Sbjct: 570 RFWPNNKSRMYLLENTG 586

[Close]

BLAST of PI0016532 vs. ExPASy Swiss-Prot
Match: Q01593 (B3 domain-containing transcription factor ABI3 OS=Arabidopsis thaliana OX=3702 GN=ABI3 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.8e-20
Identity = 44/76 (57.89%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 172 KILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYK 231
           K LR LL+K LK SDVG+LGRIVLPK+EAE +LP L  ++G+ + + D+ ++R W M+Y+
Sbjct: 566 KNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYR 625

Query: 232 YWANNRSRMYVLENTG 248
           +W NN+SRMY+LENTG
Sbjct: 626 FWPNNKSRMYLLENTG 641

[Close]

BLAST of PI0016532 vs. ExPASy Swiss-Prot
Match: Q9LW31 (B3 domain-containing transcription factor FUS3 OS=Arabidopsis thaliana OX=3702 GN=FUS3 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 9.1e-19
Identity = 46/78 (58.97%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 170 DNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMK 229
           D + LR L +KELKNSDV SL R++LPK+ AE +LP L  KEG+ I + D++    WT K
Sbjct: 84  DPRKLRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFK 143

Query: 230 YKYWANNRSRMYVLENTG 248
           Y+YW NN SRMYVLENTG
Sbjct: 144 YRYWPNNNSRMYVLENTG 161

[Close]

BLAST of PI0016532 vs. ExPASy Swiss-Prot
Match: P37398 (B3 domain-containing protein VP1 OS=Oryza sativa subsp. japonica OX=39947 GN=VP1 PE=1 SV=3)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-18
Identity = 45/77 (58.44%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 171 NKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKY 230
           +K LR LL+K LK SDVGSLGRIVLPK EAE +LP L  ++G+ I + D+ +++ W M+Y
Sbjct: 530 DKNLRFLLQKVLKQSDVGSLGRIVLPK-EAEVHLPELKTRDGVSIPMEDIGTSQVWNMRY 589

Query: 231 KYWANNRSRMYVLENTG 248
           ++W NN+SRMY+LENTG
Sbjct: 590 RFWPNNKSRMYLLENTG 605

[Close]

BLAST of PI0016532 vs. ExPASy TrEMBL
Match: A0A0A0KND0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517930 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.5e-122
Identity = 230/258 (89.15%), Postives = 235/258 (91.09%), Query Frame = 0


Query: 1   MDDHHNP----HHHHQELPPFPSAAVTAPTI-LHSPPQNSCYLPPILSQTCLGSFSSSTP 60
           MDDHHNP    HHHH ELPPFPS AVTAPT  LHSPPQN CYLPP LSQTCL SFSSS P
Sbjct: 1   MDDHHNPHQNHHHHHHELPPFPSTAVTAPTTNLHSPPQNPCYLPPTLSQTCLASFSSSAP 60

Query: 61  QSFF-SPHEPQLLAPHFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDAWSTKVARTNRRL 120
           QSFF S HEPQ LAP FPHSPT L+YG +EPNI SVFPKDDGKKALDAWSTKVARTNRRL
Sbjct: 61  QSFFSSSHEPQPLAPRFPHSPTLLSYGLDEPNIQSVFPKDDGKKALDAWSTKVARTNRRL 120

Query: 121 ARQRTLTSFTTRTSSSSSSSSCGYNDDYSKGLTITHFPNTDSSHNNRNLFTFCTPDNKIL 180
           ARQRTLTSFTTR   SSSSSSCGY+DDYSKGLTITHFPNTDSSHNNR+LFTFCTPDNKIL
Sbjct: 121 ARQRTLTSFTTR---SSSSSSCGYHDDYSKGLTITHFPNTDSSHNNRHLFTFCTPDNKIL 180

Query: 181 RMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWA 240
           RMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWA
Sbjct: 181 RMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWA 240

Query: 241 NNRSRMYVLENTGISSTN 253
           NNRSRMYVLENTG +STN
Sbjct: 241 NNRSRMYVLENTGFTSTN 255

[Close]

BLAST of PI0016532 vs. ExPASy TrEMBL
Match: A0A6J1EJR4 (B3 domain-containing transcription factor LEC2 OS=Cucurbita moschata OX=3662 GN=LOC111433235 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 170/266 (63.91%), Postives = 197/266 (74.06%), Query Frame = 0


Query: 1   MDDHHNPHHHHQELPPFPSAAVTAPTILHS---PPQNSCYLPPILSQTCLGSFSSSTPQS 60
           MDD     +HH +LPP  SA ++A TIL S   PP    +LPPILSQ CLG FSS  P+S
Sbjct: 1   MDD----DNHHYDLPPLSSATLSAATILLSHPPPPPQDSHLPPILSQHCLG-FSSPAPKS 60

Query: 61  FFSPHEPQLLAP----------HFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDAWSTKV 120
           +F  + P    P          HFP S  FL+YGFN+ +  S+F KD+G++ LDAWSTKV
Sbjct: 61  YFFTNPPPPPPPPPPPHDQPPSHFPPSSAFLSYGFNDLST-SLFQKDEGRRVLDAWSTKV 120

Query: 121 ARTNRRLARQRTLTSFTTRTSSSS----SSSSCGY-NDDYSKGLTITHFPNTDSSHN-NR 180
           AR+ RRLARQRTLT   T +SSSS    SSS  GY ND+YSKGL  THF NTD+ +N N 
Sbjct: 121 ARSKRRLARQRTLTLSRTSSSSSSTSAASSSGFGYNNDEYSKGLMATHFLNTDTHNNANP 180

Query: 181 NLFTFCTPDNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVN 240
           N FT CTPDNKILRMLLKK+LKNSDVGSLGRIVLPKREAEENLP LTDKEG+QIV+R+V+
Sbjct: 181 NNFTLCTPDNKILRMLLKKDLKNSDVGSLGRIVLPKREAEENLPLLTDKEGIQIVMREVH 240

Query: 241 SNRRWTMKYKYWANNRSRMYVLENTG 248
           SN++W MKYKYWANNRSRMYVLENTG
Sbjct: 241 SNKKWAMKYKYWANNRSRMYVLENTG 260

[Close]

BLAST of PI0016532 vs. ExPASy TrEMBL
Match: A0A6J1IQY4 (B3 domain-containing transcription factor LEC2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478581 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.6e-74
Identity = 166/259 (64.09%), Postives = 196/259 (75.68%), Query Frame = 0


Query: 1   MDDHHNPHHHHQELPPFPSAAVTAPTILHS---PPQNSCYLPPILSQTCLGSFSSSTPQS 60
           MDD     +HH +L P  SA ++A TIL S   PP    +LPPILSQ CLG FSS  P+S
Sbjct: 1   MDD----DNHHHDLAPLSSATLSAATILLSPPPPPPQDSHLPPILSQHCLG-FSSPAPKS 60

Query: 61  FFSPHEP----QLLAPHFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDAWSTKVARTNRR 120
           +F  + P      L  HFP S  FL++GFN+    S+  KD+G++ LDAWSTKVAR+ RR
Sbjct: 61  YFFTNPPPPLHDQLPSHFPPSSAFLSHGFNDLTT-SLLQKDEGRRVLDAWSTKVARSKRR 120

Query: 121 LARQRTLT-SFTTRTSSSSSSSSCGY---NDDYSKGLTITHFPNTDSSHN-NRNLFTFCT 180
           LARQRTLT S  + +SSSSS+SS G+   ND+YSKGL  THF NTD+ +N N N FT CT
Sbjct: 121 LARQRTLTLSRISSSSSSSSASSSGFGYNNDEYSKGLMATHFLNTDTHNNANPNNFTLCT 180

Query: 181 PDNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTM 240
           PDNKILRMLLKK+LKNSDVGSLGRIVLPKREAEENLP LTDKEG+QIV+R+V+SN++W M
Sbjct: 181 PDNKILRMLLKKDLKNSDVGSLGRIVLPKREAEENLPLLTDKEGIQIVMREVHSNKKWAM 240

Query: 241 KYKYWANNRSRMYVLENTG 248
           KYKYWANNRSRMYVLENTG
Sbjct: 241 KYKYWANNRSRMYVLENTG 253

[Close]

BLAST of PI0016532 vs. ExPASy TrEMBL
Match: A0A6J1KW90 (B3 domain-containing transcription factor LEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111496981 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61
Identity = 145/243 (59.67%), Postives = 175/243 (72.02%), Query Frame = 0


Query: 8   HHHHQELPPFPSAAVTAPTILHSPPQNSCYLPPILSQTCLGSFSSSTPQSFFSPHEPQLL 67
           H H+  LPPFP     +P     PPQNS    PIL    LG FS  TPQS+F P      
Sbjct: 18  HRHNLNLPPFPPTTALSPP---PPPQNSPV--PILPHPPLG-FSLRTPQSYFVP------ 77

Query: 68  APHFPHSPTFLNYGF---NEPNIHSVFPKDDGKKALDAWSTKVARTNRRLARQRTLTSFT 127
                  P+ ++YGF   N+P I+ + PKDDG++ LDAWSTKVAR+ RRLARQR+L+   
Sbjct: 78  -------PSLVSYGFPIENDP-INPLLPKDDGRRGLDAWSTKVARSKRRLARQRSLSVTK 137

Query: 128 TRTSSSSSSSSCGYNDDYSKGLTITHFPNTDSSHNNRNLFTFCTPDNKILRMLLKKELKN 187
             +SSSSSS   G +D +SKG+T+T  P+  +  +N NL T  TPD K+LR+LLKKELKN
Sbjct: 138 PPSSSSSSSGFAGSSDHHSKGITVT--PSQPNRTHNLNLSTLSTPD-KVLRILLKKELKN 197

Query: 188 SDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWANNRSRMYVLE 247
           SDVGSLGRIVLPKREAEENLPFLTDKEG+QIV+RDVNSN++W+MKYKYWANNRSRMYVLE
Sbjct: 198 SDVGSLGRIVLPKREAEENLPFLTDKEGMQIVIRDVNSNKKWSMKYKYWANNRSRMYVLE 237

[Close]

BLAST of PI0016532 vs. ExPASy TrEMBL
Match: A0A6J1EM52 (B3 domain-containing transcription factor LEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111433814 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.5e-59
Identity = 145/252 (57.54%), Postives = 178/252 (70.63%), Query Frame = 0


Query: 2   DDHHN---PHHHHQELPPFPSAAVTAPTILHSPPQNSCYLPPILSQTCLGSFSSSTPQSF 61
           DDH +    H H+  LPPFP     +P     PP+NS    PIL    LG FS  TPQS+
Sbjct: 6   DDHRHRRRNHRHNLNLPPFPPTTPLSPP--PPPPKNSPV--PILPHPPLG-FSLRTPQSY 65

Query: 62  FSPHEPQLLAPHFPHSPTFLNYGF---NEPNIHSVFPKDDGKKALDAWSTKVARTNRRLA 121
           F P             P+ L+YGF   NEP I+ + PKDDG++ LDAW+TKVAR+ RRLA
Sbjct: 66  FVP-------------PSLLSYGFPIGNEP-INPLLPKDDGRRGLDAWTTKVARSKRRLA 125

Query: 122 RQRTLTSFTTRTSSSSSSSSCGYNDDYSKGLTITHFPNTDSSHNNRNLFTFCTPDNKILR 181
           RQR+L+     +SSSSSS   G +D +SK +T+T  P+  +  +N NL T  TP NK+LR
Sbjct: 126 RQRSLSVTKPPSSSSSSSGLAGSSDHHSKRITVT--PSQPNRTHNLNLSTLSTP-NKVLR 185

Query: 182 MLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWAN 241
           +LLKKELKNSDVGSLGRIVLPKREAEENLPFL+DKEG+QI++RDVNSN++W+MKYKYWAN
Sbjct: 186 ILLKKELKNSDVGSLGRIVLPKREAEENLPFLSDKEGMQILIRDVNSNKKWSMKYKYWAN 235

Query: 242 NRSRMYVLENTG 248
           NRSRMYVLE+TG
Sbjct: 246 NRSRMYVLESTG 235

[Close]

BLAST of PI0016532 vs. NCBI nr
Match: XP_011658520.1 (B3 domain-containing transcription factor LEC2 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 3.9e-120
Identity = 227/253 (89.72%), Postives = 231/253 (91.30%), Query Frame = 0


Query: 1   MDDHHNP----HHHHQELPPFPSAAVTAPTI-LHSPPQNSCYLPPILSQTCLGSFSSSTP 60
           MDDHHNP    HHHH ELPPFPS AVTAPT  LHSPPQN CYLPP LSQTCL SFSSS P
Sbjct: 1   MDDHHNPHQNHHHHHHELPPFPSTAVTAPTTNLHSPPQNPCYLPPTLSQTCLASFSSSAP 60

Query: 61  QSFF-SPHEPQLLAPHFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDAWSTKVARTNRRL 120
           QSFF S HEPQ LAP FPHSPT L+YG +EPNI SVFPKDDGKKALDAWSTKVARTNRRL
Sbjct: 61  QSFFSSSHEPQPLAPRFPHSPTLLSYGLDEPNIQSVFPKDDGKKALDAWSTKVARTNRRL 120

Query: 121 ARQRTLTSFTTRTSSSSSSSSCGYNDDYSKGLTITHFPNTDSSHNNRNLFTFCTPDNKIL 180
           ARQRTLTSFTTR   SSSSSSCGY+DDYSKGLTITHFPNTDSSHNNR+LFTFCTPDNKIL
Sbjct: 121 ARQRTLTSFTTR---SSSSSSCGYHDDYSKGLTITHFPNTDSSHNNRHLFTFCTPDNKIL 180

Query: 181 RMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWA 240
           RMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWA
Sbjct: 181 RMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWA 240

Query: 241 NNRSRMYVLENTG 248
           NNRSRMYVLENTG
Sbjct: 241 NNRSRMYVLENTG 250

[Close]

BLAST of PI0016532 vs. NCBI nr
Match: XP_022925980.1 (B3 domain-containing transcription factor LEC2 [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 3.9e-75
Identity = 170/266 (63.91%), Postives = 197/266 (74.06%), Query Frame = 0


Query: 1   MDDHHNPHHHHQELPPFPSAAVTAPTILHS---PPQNSCYLPPILSQTCLGSFSSSTPQS 60
           MDD     +HH +LPP  SA ++A TIL S   PP    +LPPILSQ CLG FSS  P+S
Sbjct: 1   MDD----DNHHYDLPPLSSATLSAATILLSHPPPPPQDSHLPPILSQHCLG-FSSPAPKS 60

Query: 61  FFSPHEPQLLAP----------HFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDAWSTKV 120
           +F  + P    P          HFP S  FL+YGFN+ +  S+F KD+G++ LDAWSTKV
Sbjct: 61  YFFTNPPPPPPPPPPPHDQPPSHFPPSSAFLSYGFNDLST-SLFQKDEGRRVLDAWSTKV 120

Query: 121 ARTNRRLARQRTLTSFTTRTSSSS----SSSSCGY-NDDYSKGLTITHFPNTDSSHN-NR 180
           AR+ RRLARQRTLT   T +SSSS    SSS  GY ND+YSKGL  THF NTD+ +N N 
Sbjct: 121 ARSKRRLARQRTLTLSRTSSSSSSTSAASSSGFGYNNDEYSKGLMATHFLNTDTHNNANP 180

Query: 181 NLFTFCTPDNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVN 240
           N FT CTPDNKILRMLLKK+LKNSDVGSLGRIVLPKREAEENLP LTDKEG+QIV+R+V+
Sbjct: 181 NNFTLCTPDNKILRMLLKKDLKNSDVGSLGRIVLPKREAEENLPLLTDKEGIQIVMREVH 240

Query: 241 SNRRWTMKYKYWANNRSRMYVLENTG 248
           SN++W MKYKYWANNRSRMYVLENTG
Sbjct: 241 SNKKWAMKYKYWANNRSRMYVLENTG 260

[Close]

BLAST of PI0016532 vs. NCBI nr
Match: KAG7034599.1 (B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-74
Identity = 170/271 (62.73%), Postives = 196/271 (72.32%), Query Frame = 0


Query: 1   MDDHHNPHHHHQELPPFPSAAVTAPTILHS-----PPQNSCYLPPILSQTCLGSFSSSTP 60
           MDD     +HH +LPP  SA ++A TIL S     PP    +LPPILSQ CLG FSS  P
Sbjct: 1   MDD----DNHHYDLPPLSSATLSAATILLSHPPPPPPPQDSHLPPILSQHCLG-FSSPAP 60

Query: 61  QSFFSPHEP-------------QLLAPHFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDA 120
           +S+F  + P               L  HFP S  FL+YGFN+    S+F KD+G++ LDA
Sbjct: 61  KSYFFTNPPPPPPPPPPPPPPHDQLPSHFPPSSAFLSYGFNDLTT-SLFQKDEGRRVLDA 120

Query: 121 WSTKVARTNRRLARQRTLTSFTTRTSSSS----SSSSCGY-NDDYSKGLTITHFPNTDSS 180
           WSTKVAR+ RRLARQRTLT   T +SSSS    SSS  GY ND+YSKGL  THF NTD+ 
Sbjct: 121 WSTKVARSKRRLARQRTLTLSRTSSSSSSTSAASSSGFGYNNDEYSKGLMATHFLNTDTH 180

Query: 181 HN-NRNLFTFCTPDNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIV 240
           +N N N FT CTPDNKILRMLLKK+LKNSDVGSLGRIVLPKREAEENLP LTDKEG+QIV
Sbjct: 181 NNANPNNFTLCTPDNKILRMLLKKDLKNSDVGSLGRIVLPKREAEENLPLLTDKEGIQIV 240

Query: 241 VRDVNSNRRWTMKYKYWANNRSRMYVLENTG 248
           +R+V+SN++W MKYKYWANNRSRMYVLENTG
Sbjct: 241 MREVHSNKKWAMKYKYWANNRSRMYVLENTG 265

[Close]

BLAST of PI0016532 vs. NCBI nr
Match: XP_023544601.1 (B3 domain-containing transcription factor LEC2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.3 bits (739), Expect = 3.3e-74
Identity = 169/268 (63.06%), Postives = 195/268 (72.76%), Query Frame = 0


Query: 1   MDDHHNPHHHHQELPPFPSAAVTAPTILHS-----PPQNSCYLPPILSQTCLGSFSSSTP 60
           MDD     +HH +LPP  SA ++A TIL S     PP    +LPPILSQ CLG FSS  P
Sbjct: 1   MDD----DNHHYDLPPLSSATLSAATILLSHPPPPPPPQDSHLPPILSQHCLG-FSSPAP 60

Query: 61  QSFFSPHEP----------QLLAPHFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDAWST 120
           +S+F  + P            L  HFP S  FL+Y FN+    S+F KD+G++ LDAWST
Sbjct: 61  KSYFFTNPPPPPPPPPPPHDQLPSHFPPSSAFLSYSFNDLTT-SLFQKDEGRRVLDAWST 120

Query: 121 KVARTNRRLARQRTLTSFTTRTSSSS----SSSSCGY-NDDYSKGLTITHFPNTDSSHN- 180
           KVAR+ RRLARQRTLT   T +SSSS    SSS  GY ND+YSKGL  THF NTD+ +N 
Sbjct: 121 KVARSKRRLARQRTLTLSRTSSSSSSTSAASSSGFGYNNDEYSKGLMATHFLNTDTHNNA 180

Query: 181 NRNLFTFCTPDNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRD 240
           N N FT CTPDNKILRMLLKK+LKNSDVGSLGRIVLPKREAEENLP LTDKEG+QIV+R+
Sbjct: 181 NPNNFTLCTPDNKILRMLLKKDLKNSDVGSLGRIVLPKREAEENLPLLTDKEGIQIVMRE 240

Query: 241 VNSNRRWTMKYKYWANNRSRMYVLENTG 248
           V+SN++W MKYKYWANNRSRMYVLENTG
Sbjct: 241 VHSNKKWAMKYKYWANNRSRMYVLENTG 262

[Close]

BLAST of PI0016532 vs. NCBI nr
Match: XP_022978700.1 (B3 domain-containing transcription factor LEC2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 287.7 bits (735), Expect = 9.5e-74
Identity = 166/259 (64.09%), Postives = 196/259 (75.68%), Query Frame = 0


Query: 1   MDDHHNPHHHHQELPPFPSAAVTAPTILHS---PPQNSCYLPPILSQTCLGSFSSSTPQS 60
           MDD     +HH +L P  SA ++A TIL S   PP    +LPPILSQ CLG FSS  P+S
Sbjct: 1   MDD----DNHHHDLAPLSSATLSAATILLSPPPPPPQDSHLPPILSQHCLG-FSSPAPKS 60

Query: 61  FFSPHEP----QLLAPHFPHSPTFLNYGFNEPNIHSVFPKDDGKKALDAWSTKVARTNRR 120
           +F  + P      L  HFP S  FL++GFN+    S+  KD+G++ LDAWSTKVAR+ RR
Sbjct: 61  YFFTNPPPPLHDQLPSHFPPSSAFLSHGFNDLTT-SLLQKDEGRRVLDAWSTKVARSKRR 120

Query: 121 LARQRTLT-SFTTRTSSSSSSSSCGY---NDDYSKGLTITHFPNTDSSHN-NRNLFTFCT 180
           LARQRTLT S  + +SSSSS+SS G+   ND+YSKGL  THF NTD+ +N N N FT CT
Sbjct: 121 LARQRTLTLSRISSSSSSSSASSSGFGYNNDEYSKGLMATHFLNTDTHNNANPNNFTLCT 180

Query: 181 PDNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTM 240
           PDNKILRMLLKK+LKNSDVGSLGRIVLPKREAEENLP LTDKEG+QIV+R+V+SN++W M
Sbjct: 181 PDNKILRMLLKKDLKNSDVGSLGRIVLPKREAEENLPLLTDKEGIQIVMREVHSNKKWAM 240

Query: 241 KYKYWANNRSRMYVLENTG 248
           KYKYWANNRSRMYVLENTG
Sbjct: 241 KYKYWANNRSRMYVLENTG 253

[Close]

BLAST of PI0016532 vs. TAIR 10
Match: AT1G28300.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.9e-29
Identity = 88/225 (39.11%), Postives = 123/225 (54.67%), Query Frame = 0


Query: 23  TAPTILHSPPQNSCYLPPILSQTCLGSFSSSTPQSFFSPHEPQLLAPHFPHSPTFLNYGF 82
           T PT  H   Q   +LPP        S+      +  +P +P  L+  +P  P       
Sbjct: 31  TVPTYDHHQAQPHHFLPPF-------SYPVEQMAAVMNP-QPVYLSECYPQIPVTQTGSE 90

Query: 83  NEPNIHSVFPKDDGKKALDAWSTKVARTNRRLARQRTLTSFTTRTSSSSSSSSCGYNDDY 142
               + +     +    LD   TK+AR NR+ A  R+        ++SS +SS     D 
Sbjct: 91  FGSLVGNPCLWQERGGFLDPRMTKMARINRKNAMMRS-------RNNSSPNSSPSELVDS 150

Query: 143 SKGLTITHFPNTDSSHNNRNLFTFCTPDNKILRMLLKKELKNSDVGSLGRIVLPKREAEE 202
            + L + +  N     + ++ +   T DNK LR+L +KELKNSDVGSLGRIVLPKR+AE 
Sbjct: 151 KRQLMMLNLKNNVQISDKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEA 210

Query: 203 NLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWANNRSRMYVLENTG 248
           NLP L+DKEG+ + +RDV S + W+ KYK+W+NN+SRMYVLENTG
Sbjct: 211 NLPKLSDKEGIVVQMRDVFSMQSWSFKYKFWSNNKSRMYVLENTG 240

[Close]

BLAST of PI0016532 vs. TAIR 10
Match: AT3G24650.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-21
Identity = 44/76 (57.89%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 172 KILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYK 231
           K LR LL+K LK SDVG+LGRIVLPK+EAE +LP L  ++G+ + + D+ ++R W M+Y+
Sbjct: 566 KNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYR 625

Query: 232 YWANNRSRMYVLENTG 248
           +W NN+SRMY+LENTG
Sbjct: 626 FWPNNKSRMYLLENTG 641

[Close]

BLAST of PI0016532 vs. TAIR 10
Match: AT3G26790.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 95.5 bits (236), Expect = 6.4e-20
Identity = 46/78 (58.97%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 170 DNKILRMLLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMK 229
           D + LR L +KELKNSDV SL R++LPK+ AE +LP L  KEG+ I + D++    WT K
Sbjct: 84  DPRKLRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFK 143

Query: 230 YKYWANNRSRMYVLENTG 248
           Y+YW NN SRMYVLENTG
Sbjct: 144 YRYWPNNNSRMYVLENTG 161

[Close]

BLAST of PI0016532 vs. TAIR 10
Match: AT2G30470.1 (high-level expression of sugar-inducible gene 2 )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 177 LLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWANN 236
           L +K L  SD G +GR+VLPK  AE   P ++  EG+ + ++DV   R WT +++YW NN
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVR-GREWTFQFRYWPNN 353

Query: 237 RSRMYVLE 245
            SRMYVLE
Sbjct: 354 NSRMYVLE 360

[Close]

BLAST of PI0016532 vs. TAIR 10
Match: AT4G32010.1 (HSI2-like 1 )

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-10
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 177 LLKKELKNSDVGSLGRIVLPKREAEENLPFLTDKEGLQIVVRDVNSNRRWTMKYKYWANN 236
           L +K L  SD G +GR+VLPK  AE   P ++  EGL + ++D+   + W  ++++W NN
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLKIQDI-KGKEWVFQFRFWPNN 344

Query: 237 RSRMYVLE 245
            SRMYVLE
Sbjct: 345 NSRMYVLE 351

The following BLAST results are available for this feature:

BLAST of PI0016532 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PFR7	1.4e-27	39.11	B3 domain-containing transcription factor LEC2 OS=Arabidopsis thaliana OX=3702 G...	[more]
P26307	2.2e-20	59.74	Regulatory protein viviparous-1 OS=Zea mays OX=4577 GN=VP1 PE=2 SV=1	[more]
Q01593	4.8e-20	57.89	B3 domain-containing transcription factor ABI3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LW31	9.1e-19	58.97	B3 domain-containing transcription factor FUS3 OS=Arabidopsis thaliana OX=3702 G...	[more]
P37398	3.4e-18	58.44	B3 domain-containing protein VP1 OS=Oryza sativa subsp. japonica OX=39947 GN=VP1...	[more]

BLAST of PI0016532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KND0	3.5e-122	89.15	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517930 PE=4 ...	[more]
A0A6J1EJR4	1.9e-75	63.91	B3 domain-containing transcription factor LEC2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1IQY4	4.6e-74	64.09	B3 domain-containing transcription factor LEC2 isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1KW90	1.2e-61	59.67	B3 domain-containing transcription factor LEC2-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EM52	2.5e-59	57.54	B3 domain-containing transcription factor LEC2-like OS=Cucurbita moschata OX=366...	[more]

BLAST of PI0016532 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658520.1	3.9e-120	89.72	B3 domain-containing transcription factor LEC2 [Cucumis sativus]	[more]
XP_022925980.1	3.9e-75	63.91	B3 domain-containing transcription factor LEC2 [Cucurbita moschata]	[more]
KAG7034599.1	1.5e-74	62.73	B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma ...	[more]
XP_023544601.1	3.3e-74	63.06	B3 domain-containing transcription factor LEC2 [Cucurbita pepo subsp. pepo]	[more]
XP_022978700.1	9.5e-74	64.09	B3 domain-containing transcription factor LEC2 isoform X1 [Cucurbita maxima]	[more]

BLAST of PI0016532 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28300.1	9.9e-29	39.11	AP2/B3-like transcriptional factor family protein	[more]
AT3G24650.1	3.4e-21	57.89	AP2/B3-like transcriptional factor family protein	[more]
AT3G26790.1	6.4e-20	58.97	AP2/B3-like transcriptional factor family protein	[more]
AT2G30470.1	1.7e-12	48.53	high-level expression of sugar-inducible gene 2	[more]
AT4G32010.1	1.6e-10	44.12	HSI2-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 180..244 e-value: 5.5E-9 score: 35.8
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 177..247 e-value: 3.15808E-14 score: 64.6565
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 167..250 e-value: 3.0E-26 score: 93.5
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 177..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR31140:SF74	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR LEC2 ISOFORM X1	coord: 38..247
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 38..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016532.1	PI0016532.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity