PI0016486 (gene) Melon (PI 482460) v1

Overview


Name	PI0016486
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr08: 5517299 .. 5517928 (-)
RNA-Seq Expression	PI0016486
Synteny	PI0016486

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAATATGACTACTCTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGTAAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAACACCGGTTGGAGAGACGACCCTAATCTGAGGTGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACTAATTTGGAAGATTTAGTAAAAGCCCTTGCTACTAATACAATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTAACAAATGCAATAAGCAAACTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCGCTTAGAAGCGGTAAGGTTCTGGAAACCCCTTCAAGTGAAGAAAATGTAACTTTTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAAGAAGAAAAGTTAGAAACTAGTTCTTTACCATCTTCTTCAAAAGGTAAATCTCATATTGTTGATTATTCTCCATATGTCCTTAAGGCTCATTTTCCTTCCAGGTTAGCTCCTAAGAAGAAATAG

mRNA sequence

ATGCTTAATATGACTACTCTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGTAAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAACACCGGTTGGAGAGACGACCCTAATCTGAGGTGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACTAATTTGGAAGATTTAGTAAAAGCCCTTGCTACTAATACAATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTAACAAATGCAATAAGCAAACTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCGCTTAGAAGCGGTAAGGTTCTGGAAACCCCTTCAAGTGAAGAAAATGTAACTTTTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAAGAAGAAAAGTTAGAAACTAGTTCTTTACCATCTTCTTCAAAAGGTAAATCTCATATTGTTGATTATTCTCCATATGTCCTTAAGGCTCATTTTCCTTCCAGGTTAGCTCCTAAGAAGAAATAG

Coding sequence (CDS)

ATGCTTAATATGACTACTCTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGTAAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAACACCGGTTGGAGAGACGACCCTAATCTGAGGTGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACTAATTTGGAAGATTTAGTAAAAGCCCTTGCTACTAATACAATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTAACAAATGCAATAAGCAAACTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCGCTTAGAAGCGGTAAGGTTCTGGAAACCCCTTCAAGTGAAGAAAATGTAACTTTTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAAGAAGAAAAGTTAGAAACTAGTTCTTTACCATCTTCTTCAAAAGGTAAATCTCATATTGTTGATTATTCTCCATATGTCCTTAAGGCTCATTTTCCTTCCAGGTTAGCTCCTAAGAAGAAATAG

Protein sequence

MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWRDDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRSGKVLETPSSEENVTFTPILLENKDEKKEEKLETSSLPSSSKGKSHIVDYSPYVLKAHFPSRLAPKKK

Homology

[Close]

BLAST of PI0016486 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.3e-76
Identity = 148/212 (69.81%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGW 60
           MLNM TTLLTSFVQG  +KV KCGVCGLVGH N+KCP+++E+VN++R+YDPHSNTYN+GW
Sbjct: 204 MLNMTTTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGW 263

Query: 61  RDDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISK 120
           RD+PNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK
Sbjct: 264 RDNPNLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISK 323

Query: 121 LEGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETSSL 180
           ++GKGKLPAQ DHANVSAISLRSGK+L+TP++ E+ VT  P+ L +K+E KEEK+ET+  
Sbjct: 324 MDGKGKLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPS 383

Query: 181 PSSSKG-KSHIVDYSPYVLKAHFPSRLAPKKK 210
           PS+SK  KS + D++PY+ K  FPSRL PKKK
Sbjct: 384 PSNSKNDKSPLNDFTPYIPKPPFPSRLGPKKK 415

[Close]

BLAST of PI0016486 vs. ExPASy TrEMBL
Match: A0A1S3CQU8 (uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.6e-75
Identity = 144/211 (68.25%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWR 60
           MLNMTTLLTSFVQG ++KV KCGVCGLVG+PNDKCP ++E+VN++R+YDPH NTYN GWR
Sbjct: 53  MLNMTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWR 112

Query: 61  DDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKL 120
           D+PNLRWGNDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT  ISK+
Sbjct: 113 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKM 172

Query: 121 EGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETSSLP 180
           +GKGKLPAQPDH NVSAISLRSGK+L+TP++ E+ VT   + L +K++ KEEK+ET+S  
Sbjct: 173 DGKGKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSS 232

Query: 181 SSSKG-KSHIVDYSPYVLKAHFPSRLAPKKK 210
           S+SK  KS + D++PY+ K  FPSRLAPKKK
Sbjct: 233 SNSKNDKSPLNDFTPYIPKPPFPSRLAPKKK 263

[Close]

BLAST of PI0016486 vs. ExPASy TrEMBL
Match: A0A5A7SRF5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00500 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.5e-75
Identity = 143/211 (67.77%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWR 60
           MLNMTTLLTSFVQG  +KV KC VCGLVGHPNDKCP+++EE+N+++KYDP+SNTYNTGWR
Sbjct: 293 MLNMTTLLTSFVQGTPLKVTKCRVCGLVGHPNDKCPEVIEELNIVKKYDPYSNTYNTGWR 352

Query: 61  DDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKL 120
           D+P LRWGNDNQ+ +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK+
Sbjct: 353 DNPILRWGNDNQKHTQAPTTSSNQSTNLKDIIKALATNTLSFQQEMKQQMTQLTTTISKM 412

Query: 121 EGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETS-SL 180
           +GKGKLPAQP+HANVS ISLRSGK+L+TPS+ E+ VT  P+ L +K+E KEEK+ET+ SL
Sbjct: 413 DGKGKLPAQPNHANVSVISLRSGKILDTPSTKEKKVTSIPLPLNSKNESKEEKVETNPSL 472

Query: 181 PSSSKGKSHIVDYSPYVLKAHFPSRLAPKKK 210
            +    KS + D++PY+ + HFPSRLAPKKK
Sbjct: 473 SNPKNDKSPLNDFTPYIPEPHFPSRLAPKKK 503

[Close]

BLAST of PI0016486 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.5e-75
Identity = 144/211 (68.25%), Postives = 180/211 (85.31%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWR 60
           MLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN++RKYDPH NTYN+GWR
Sbjct: 139 MLNMTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWR 198

Query: 61  DDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKL 120
           D+PNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK+
Sbjct: 199 DNPNLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKM 258

Query: 121 EGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETSSLP 180
           +GKGKL AQ ++ANVSA+SLRSGK+L+TP++ E+  T  P+ L  K+E KEEK+ET+  P
Sbjct: 259 DGKGKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSP 318

Query: 181 SSSKG-KSHIVDYSPYVLKAHFPSRLAPKKK 210
            +SK  K  + D++PY+ K  FPSRLAPKKK
Sbjct: 319 YNSKNDKFPLNDFTPYIPKPPFPSRLAPKKK 349

[Close]

BLAST of PI0016486 vs. ExPASy TrEMBL
Match: A0A5A7UAL2 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001750 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.5e-74
Identity = 143/211 (67.77%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWR 60
           M NMTTLLTSFVQG  +KV KCGVC LVGHPNDKCP+++E+VN++RKYDPH NTYN GWR
Sbjct: 30  MFNMTTLLTSFVQGTPLKVTKCGVCCLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNLGWR 89

Query: 61  DDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKL 120
           D+PNLRWGNDNQ+ +QA  +S+NQGTNLED++KAL T T+SFQ EMKQQM+ LT AISK+
Sbjct: 90  DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALITKTLSFQQEMKQQMTQLTTAISKM 149

Query: 121 EGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETSSLP 180
           + KGKLPAQPDHANVSAISLRSGK+L+T ++ E+ VT  P+   +K+E KEEK+ET+  P
Sbjct: 150 DVKGKLPAQPDHANVSAISLRSGKILDTSTTKEKKVTSKPLPFNSKNESKEEKVETNPSP 209

Query: 181 SSSKG-KSHIVDYSPYVLKAHFPSRLAPKKK 210
           S+SK  KS + D++ Y+ K HFPSRLAPK K
Sbjct: 210 SNSKNDKSPLNDFTLYIPKPHFPSRLAPKNK 240

[Close]

BLAST of PI0016486 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75
Identity = 148/212 (69.81%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGW 60
           MLNM TTLLTSFVQG  +KV KCGVCGLVGH N+KCP+++E+VN++R+YDPHSNTYN+GW
Sbjct: 204 MLNMTTTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGW 263

Query: 61  RDDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISK 120
           RD+PNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK
Sbjct: 264 RDNPNLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISK 323

Query: 121 LEGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETSSL 180
           ++GKGKLPAQ DHANVSAISLRSGK+L+TP++ E+ VT  P+ L +K+E KEEK+ET+  
Sbjct: 324 MDGKGKLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPS 383

Query: 181 PSSSKG-KSHIVDYSPYVLKAHFPSRLAPKKK 210
           PS+SK  KS + D++PY+ K  FPSRL PKKK
Sbjct: 384 PSNSKNDKSPLNDFTPYIPKPPFPSRLGPKKK 415

[Close]

BLAST of PI0016486 vs. NCBI nr
Match: XP_008465649.1 (PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 5.5e-75
Identity = 144/211 (68.25%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWR 60
           MLNMTTLLTSFVQG ++KV KCGVCGLVG+PNDKCP ++E+VN++R+YDPH NTYN GWR
Sbjct: 53  MLNMTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWR 112

Query: 61  DDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKL 120
           D+PNLRWGNDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT  ISK+
Sbjct: 113 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKM 172

Query: 121 EGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETSSLP 180
           +GKGKLPAQPDH NVSAISLRSGK+L+TP++ E+ VT   + L +K++ KEEK+ET+S  
Sbjct: 173 DGKGKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSS 232

Query: 181 SSSKG-KSHIVDYSPYVLKAHFPSRLAPKKK 210
           S+SK  KS + D++PY+ K  FPSRLAPKKK
Sbjct: 233 SNSKNDKSPLNDFTPYIPKPPFPSRLAPKKK 263

[Close]

BLAST of PI0016486 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 290.8 bits (743), Expect = 9.3e-75
Identity = 144/211 (68.25%), Postives = 180/211 (85.31%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWR 60
           MLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+VN++RKYDPH NTYN+GWR
Sbjct: 139 MLNMTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWR 198

Query: 61  DDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKL 120
           D+PNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK+
Sbjct: 199 DNPNLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKM 258

Query: 121 EGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETSSLP 180
           +GKGKL AQ ++ANVSA+SLRSGK+L+TP++ E+  T  P+ L  K+E KEEK+ET+  P
Sbjct: 259 DGKGKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSP 318

Query: 181 SSSKG-KSHIVDYSPYVLKAHFPSRLAPKKK 210
            +SK  K  + D++PY+ K  FPSRLAPKKK
Sbjct: 319 YNSKNDKFPLNDFTPYIPKPPFPSRLAPKKK 349

[Close]

BLAST of PI0016486 vs. NCBI nr
Match: KAA0031967.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK16787.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 290.8 bits (743), Expect = 9.3e-75
Identity = 143/211 (67.77%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWR 60
           MLNMTTLLTSFVQG  +KV KC VCGLVGHPNDKCP+++EE+N+++KYDP+SNTYNTGWR
Sbjct: 293 MLNMTTLLTSFVQGTPLKVTKCRVCGLVGHPNDKCPEVIEELNIVKKYDPYSNTYNTGWR 352

Query: 61  DDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKL 120
           D+P LRWGNDNQ+ +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK+
Sbjct: 353 DNPILRWGNDNQKHTQAPTTSSNQSTNLKDIIKALATNTLSFQQEMKQQMTQLTTTISKM 412

Query: 121 EGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETS-SL 180
           +GKGKLPAQP+HANVS ISLRSGK+L+TPS+ E+ VT  P+ L +K+E KEEK+ET+ SL
Sbjct: 413 DGKGKLPAQPNHANVSVISLRSGKILDTPSTKEKKVTSIPLPLNSKNESKEEKVETNPSL 472

Query: 181 PSSSKGKSHIVDYSPYVLKAHFPSRLAPKKK 210
            +    KS + D++PY+ + HFPSRLAPKKK
Sbjct: 473 SNPKNDKSPLNDFTPYIPEPHFPSRLAPKKK 503

[Close]

BLAST of PI0016486 vs. NCBI nr
Match: KAA0050529.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-73
Identity = 143/211 (67.77%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEVNVIRKYDPHSNTYNTGWR 60
           M NMTTLLTSFVQG  +KV KCGVC LVGHPNDKCP+++E+VN++RKYDPH NTYN GWR
Sbjct: 30  MFNMTTLLTSFVQGTPLKVTKCGVCCLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNLGWR 89

Query: 61  DDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKL 120
           D+PNLRWGNDNQ+ +QA  +S+NQGTNLED++KAL T T+SFQ EMKQQM+ LT AISK+
Sbjct: 90  DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALITKTLSFQQEMKQQMTQLTTAISKM 149

Query: 121 EGKGKLPAQPDHANVSAISLRSGKVLETPSS-EENVTFTPILLENKDEKKEEKLETSSLP 180
           + KGKLPAQPDHANVSAISLRSGK+L+T ++ E+ VT  P+   +K+E KEEK+ET+  P
Sbjct: 150 DVKGKLPAQPDHANVSAISLRSGKILDTSTTKEKKVTSKPLPFNSKNESKEEKVETNPSP 209

Query: 181 SSSKG-KSHIVDYSPYVLKAHFPSRLAPKKK 210
           S+SK  KS + D++ Y+ K HFPSRLAPK K
Sbjct: 210 SNSKNDKSPLNDFTLYIPKPHFPSRLAPKNK 240

The following BLAST results are available for this feature:

BLAST of PI0016486 vs.


Match Name	E-value	Identity	Description

BLAST of PI0016486 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQ60	5.3e-76	69.81	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CQU8	2.6e-75	68.25	uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=...	[more]
A0A5A7SRF5	4.5e-75	67.77	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CRR8	4.5e-75	68.25	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7UAL2	6.5e-74	67.77	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of PI0016486 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067359.1	1.1e-75	69.81	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos...	[more]
XP_008465649.1	5.5e-75	68.25	PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]	[more]
KAA0047407.1	9.3e-75	68.25	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]
KAA0031967.1	9.3e-75	67.77	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK16787.1 retrotranspos...	[more]
KAA0050529.1	1.3e-73	67.77	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0016486 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016486.1	PI0016486.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding