PI0016406 (gene) Melon (PI 482460) v1

Overview


Name	PI0016406
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribonuclease H
Location	chr07: 19110111 .. 19111310 (+)
RNA-Seq Expression	PI0016406
Synteny	PI0016406

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGTAATACATCAAGTTAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTGCCTTACAGCCAATATGTTACAAAATTGTCTCAAATTTTTTAGAAAATTTCATTTGATCATGTTCATAGGAAGGACAATCAAATGGCAGATGTATTAGCCACCTTGGCAGTGATGTTTGATCTTAATCTTGAATGTGAACTTTATCCAATCCAAATTACAAAGCGAGATGCATCGGCATATTGTATGAATATTGAAAATGATAACAAGCCATGGTATTTTGACATCAAGCAGTACATAAAGTGTAGAGAATATCCATATAGAGCTTCGGAGAATGACAAACGCACAATAAGAAGGTTGACCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCATGATATGGTGCTCCTTTGGTGTGTTGATGTGGAAGAAGCAAAACAAATTATGACAGGAAATACATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTAGTTATTATTGGACAATGATGAAATCAAATTGCATAAAATATGCAAGAGAATGTAAAAAGTGTCAAATTTATATGGATAAAATTCATGCAGCGGCATCTCCATTGCATGTCTTGTCAGCACCTTGGCCCTTTTCTTTGTGGGGAATGGATGTTATTGGACCCATTGATCCTAAAGCCTCAAATGGTCATCGTTTTATTCTGGTGGCCATTGATAACTTTACTAAATGGATAGAAGCGACATCTTATTGCAACATTACAAAAGGAGTAGTGCTCAAGTTTATAAAAAAAGAGTTGATTTGTCGTTATGGTCTCCTAGAGGGTATTATTACAGATAATGCCAAAAACCTTAATAACCAAATGATGGACGAACTTTGTGAACAGTTTAAGATTAATCACCAAAATTCAACTCCATATCGCCCAAAGATGAATGGGGCAATTAAGGCAGCCAACAAAAATATTAAAAAATTATTGAGAAAATGACAACAACATACAAAGATTGGCATGAAATTCTGCCGTATGCGCTACATGGATATCGCACGTCAGTTCGTACTTCAACAGGGGCAACACCATTTTCTTTGGTTTATGATATGGAAGCTATCCTGCCTTTAGAAGTTGAAATACCTTCATTGAGAGTCCTCATGGAAGCTAAGTTAGATGAAGTTGAATGGATATGA

mRNA sequence

ATGTTAGTAATACATCAAGTTAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTGCCTTACAGCCAATATGTTACAAAATTGAAGGACAATCAAATGGCAGATGTATTAGCCACCTTGGCAGTGATGTTTGATCTTAATCTTGAATGTGAACTTTATCCAATCCAAATTACAAAGCGAGATGCATCGGCATATTGTATGAATATTGAAAATGATAACAAGCCATGGTATTTTGACATCAAGCAGTACATAAAGTGTAGAGAATATCCATATAGAGCTTCGGAGAATGACAAACGCACAATAAGAAGGTTGACCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCATGATATGGTGCTCCTTTGGTGTGAAATACATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTAGTTATTATTGGACAATGATGAAATCAAATTGCATAAAATATGCAAGAGAATGTAAAAAGTGTCAAATTTATATGGATAAAATTCATGCAGCGGCATCTCCATTGCATGTCTTGTCAGCACCTTGGCCCTTTTCTTTGTGGGGAATGGATGTTATTGGACCCATTGATCCTAAAGCCTCAAATGGTCATCGTTTTATTCTGGTGGCCATTGATAACTTTACTAAATGGATAGAAGCGACATCTTATTGCAACATTACAAAAGGAGTAGTGCTCAAGTTTATAAAAAAAGAGTTGATTTGTCGTTATGGTCTCCTAGAGGGTATTATTACAGATAATGCCAAAAACCTTAATAACCAAATGATGGACGAACTTTGTGAACAGTTTAAGATTAATCACCAAAATTCAACTCCATATCGCCCAAAGATGAATGGGGCAATTAAGGCAAAAATGACAACAACATACAAAGATTGGCATGAAATTCTGCCGTATGCGCTACATGGATATCGCACGTCAGTTCGTACTTCAACAGGGGCAACACCATTTTCTTTGGTTTATGATATGGAAGCTATCCTGCCTTTAGAAGTTGAAATACCTTCATTGAGAGTCCTCATGGAAGCTAAGTTAGATGAAGTTGAATGGATATGA

Coding sequence (CDS)

ATGTTAGTAATACATCAAGTTAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTGCCTTACAGCCAATATGTTACAAAATTGAAGGACAATCAAATGGCAGATGTATTAGCCACCTTGGCAGTGATGTTTGATCTTAATCTTGAATGTGAACTTTATCCAATCCAAATTACAAAGCGAGATGCATCGGCATATTGTATGAATATTGAAAATGATAACAAGCCATGGTATTTTGACATCAAGCAGTACATAAAGTGTAGAGAATATCCATATAGAGCTTCGGAGAATGACAAACGCACAATAAGAAGGTTGACCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCATGATATGGTGCTCCTTTGGTGTGAAATACATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTAGTTATTATTGGACAATGATGAAATCAAATTGCATAAAATATGCAAGAGAATGTAAAAAGTGTCAAATTTATATGGATAAAATTCATGCAGCGGCATCTCCATTGCATGTCTTGTCAGCACCTTGGCCCTTTTCTTTGTGGGGAATGGATGTTATTGGACCCATTGATCCTAAAGCCTCAAATGGTCATCGTTTTATTCTGGTGGCCATTGATAACTTTACTAAATGGATAGAAGCGACATCTTATTGCAACATTACAAAAGGAGTAGTGCTCAAGTTTATAAAAAAAGAGTTGATTTGTCGTTATGGTCTCCTAGAGGGTATTATTACAGATAATGCCAAAAACCTTAATAACCAAATGATGGACGAACTTTGTGAACAGTTTAAGATTAATCACCAAAATTCAACTCCATATCGCCCAAAGATGAATGGGGCAATTAAGGCAAAAATGACAACAACATACAAAGATTGGCATGAAATTCTGCCGTATGCGCTACATGGATATCGCACGTCAGTTCGTACTTCAACAGGGGCAACACCATTTTCTTTGGTTTATGATATGGAAGCTATCCTGCCTTTAGAAGTTGAAATACCTTCATTGAGAGTCCTCATGGAAGCTAAGTTAGATGAAGTTGAATGGATATGA

Protein sequence

MLVIHQVKEEWETRDAKLVPYSQYVTKLKDNQMADVLATLAVMFDLNLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTMNFFLSGEVLYKRNHDMVLLWCEIHEGICGTHANGHMMARQILRSSYYWTMMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELCEQFKINHQNSTPYRPKMNGAIKAKMTTTYKDWHEILPYALHGYRTSVRTSTGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI

Homology

[Close]

BLAST of PI0016406 vs. ExPASy Swiss-Prot
Match: P03360 (Gag-Pol polyprotein (Fragment) OS=Avian reticuloendotheliosis virus OX=11636 GN=pol PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-10
Identity = 45/158 (28.48%), Postives = 77/158 (48.73%), Query Frame = 0


Query: 193  PFSLWGMDVIGPIDPKASNGHRFILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRY 252
            P   W +D    I   A  G++++LV +D F+ W+EA      T  VV+K +  ++I R+
Sbjct: 867  PGEHWEVDFTEMI--TAKGGYKYLLVLVDTFSGWVEAYPAKRETSQVVIKHLIHDIIPRF 926

Query: 253  GLLEGIITDNAKNLNNQMMDELCEQFKINHQNSTPYRPKMNGAIKAKMTTTYK------- 312
            GL   I +DN      ++  +LCE   ++ +    YRP+ +G ++ +M  T K       
Sbjct: 927  GLPVQIGSDNGPAFVAKVTQQLCEALNVSWKLHCAYRPQSSGQVE-RMNRTLKETIAKLR 986

Query: 313  -----DWHEILPYALHGYRTSVRTSTGATPFSLVYDME 339
                 DW  +LP AL   R +     G +PF ++Y ++
Sbjct: 987  IETGGDWVSLLPQALLRARCTPGRE-GLSPFEILYGLK 1020

[Close]

BLAST of PI0016406 vs. ExPASy Swiss-Prot
Match: Q09575 (Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-10
Identity = 64/248 (25.81%), Postives = 110/248 (44.35%), Query Frame = 0


Query: 128  EIHEGICGTHANGHMMARQILRSSYYWTMMKSNCIKYARECKKCQ--IYMDKIHAAASPL 187
            ++HEG       G +  +Q  RS  +W  + S+     R C  CQ    M ++    +P 
Sbjct: 789  QLHEG-----HPGIVQMKQKARSFVFWRGLDSDIENMVRHCNNCQENSKMPRV-VPLNPW 848

Query: 188  HVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDNFTKWIEATSYCNITKGVVLKFIK 247
             V  APW      +D  GP+     NG  ++LV +D  TK+ E     +I+    +  + 
Sbjct: 849  PVPEAPW--KRIHIDFAGPL-----NG-CYLLVVVDAKTKYAEVKLTRSISAVTTIDLL- 908

Query: 248  KELICRYGLLEGIITDNAKNLNNQMMDELCEQFKINHQNSTPYRPKMNGAIK-------- 307
            +E+   +G  E II+DN   L + +  ++C+   I H+ S  Y P+ NGA +        
Sbjct: 909  EEIFSIHGYPETIISDNGTQLTSHLFAQMCQSHGIEHKTSAVYYPRSNGAAERFVDTLKR 968

Query: 308  --AKMTTTYKDWHEILPYALHGYRTSVRTS-TGATPFSLVYDMEAILPLEVEIPSLRVLM 363
              AK+        +IL   L  YR +  ++  G+TP    +  +    + + +P+ RVL 
Sbjct: 969  GIAKIKGEGSVNQQILNKFLISYRNTPHSALNGSTPAECHFGRKIRTTMSLLMPTDRVLK 1021

[Close]

BLAST of PI0016406 vs. ExPASy Swiss-Prot
Match: P03355 (Gag-Pol polyprotein OS=Moloney murine leukemia virus (isolate Shinnick) OX=928306 GN=gag-pol PE=1 SV=5)

HSP 1 Score: 63.9 bits (154), Expect = 4.2e-09
Identity = 58/215 (26.98%), Postives = 99/215 (46.05%), Query Frame = 0


Query: 136  THANGHMMARQILRS-SYYWTMMKSNCIKYARE-CKKC-QIYMDKIHAAASPLHVLSAPW 195
            TH +   M   + RS S Y+ + +   +K   E CK C Q+   K  +A      +    
Sbjct: 1390 THLSFSKMKALLERSHSPYYMLNRDRTLKNITETCKACAQVNASK--SAVKQGTRVRGHR 1449

Query: 196  PFSLWGMDVIGPIDPKASNGHRFILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRY 255
            P + W +D    I P    G++++LV ID F+ WIEA      T  VV K + +E+  R+
Sbjct: 1450 PGTHWEID-FTEIKP-GLYGYKYLLVFIDTFSGWIEAFPTKKETAKVVTKKLLEEIFPRF 1509

Query: 256  GLLEGIITDNAKNLNNQMMDELCEQFKINHQNSTPYRPKMNGAI------------KAKM 315
            G+ + + TDN     +++   + +   I+ +    YRP+ +G +            K  +
Sbjct: 1510 GMPQVLGTDNGPAFVSKVSQTVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTL 1569

Query: 316  TTTYKDWHEILPYALHGYRTSVRTSTGATPFSLVY 336
             T  +DW  +LP AL+  R +     G TP+ ++Y
Sbjct: 1570 ATGSRDWVLLLPLALYRARNTPGPH-GLTPYEILY 1599

[Close]

BLAST of PI0016406 vs. ExPASy Swiss-Prot
Match: P10273 (Gag-Pol polyprotein OS=Feline leukemia virus OX=11768 GN=pol PE=3 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 5.5e-09
Identity = 43/136 (31.62%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 212  GHRFILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMM 271
            G++++LV ID F+ W EA    + T  VV K + +E+  RYG+ + + +DN     +Q+ 
Sbjct: 1432 GYKYLLVFIDTFSGWAEAYPAKHETAKVVAKKLLEEIFPRYGIPQVLGSDNGPAFISQVS 1491

Query: 272  DELCEQFKINHQNSTPYRP-------KMNGAIKAKMT-----TTYKDWHEILPYALHGYR 331
              +     IN +    YRP       +MN +IK  +T     T  KDW  +LP  L+  R
Sbjct: 1492 QSVATLLGINWKLHCAYRPQSSGQVERMNRSIKETLTKLTLETGSKDWVLLLPLVLYRVR 1551

Query: 332  TSVRTSTGATPFSLVY 336
             +     G TPF ++Y
Sbjct: 1552 NTPGPH-GLTPFEILY 1566

[Close]

BLAST of PI0016406 vs. ExPASy Swiss-Prot
Match: P03359 (Gag-Pol polyprotein OS=Woolly monkey sarcoma virus OX=11970 GN=pol PE=3 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 5.5e-09
Identity = 45/136 (33.09%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 212  GHRFILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMM 271
            G+R++LV ID F+ W+EA      T   V K I +E++ R+G+ + + +DN      Q+ 
Sbjct: 1415 GNRYLLVFIDTFSGWVEAFPTKTETALTVCKKILEEILPRFGIPKVLGSDNGPAFVAQVS 1474

Query: 272  DELCEQFKINHQNSTPYRP-------KMNGAIKAKMT-----TTYKDWHEILPYALHGYR 331
              L  Q  IN +    YRP       +MN  IK  +T     T  KDW  +LP AL   R
Sbjct: 1475 QGLATQLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLALETGXKDWVALLPLALLRAR 1534

Query: 332  TSVRTSTGATPFSLVY 336
             +     G TP+ ++Y
Sbjct: 1535 -NTPGRFGLTPYEILY 1549

[Close]

BLAST of PI0016406 vs. ExPASy TrEMBL
Match: A0A5A7T0A1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 PE=4 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 1.1e-188
Identity = 327/399 (81.95%), Postives = 345/399 (86.47%), Query Frame = 0


Query: 1   MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
           MLVIHQVKEEWE RDAKLVPYSQYVTKL              +DN+MAD LATLAVMFDL
Sbjct: 381 MLVIHQVKEEWEIRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLAVMFDL 440

Query: 61  NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
           NLE EL+PIQITKRD  AYCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKRTIRRL M
Sbjct: 441 NLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM 500

Query: 121 NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
           NFFLSGEVLYKRNHDMVLL C           +I+EGICGTHANGHMMARQILRS YYWT
Sbjct: 501 NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWT 560

Query: 181 MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
            M+S+CIKYARECKKCQIYMDKIH AASPLH+LSAPWPFSLWGMDVIGPIDPKASNGHRF
Sbjct: 561 TMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHRF 620

Query: 241 ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
           ILVAID FTKWIEA SYCN+T+GVVLKFIKKELICRYGL EGIITDNAKNLNN+MMDELC
Sbjct: 621 ILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELC 680

Query: 301 EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
           EQFKINH+NSTPYRPKMNGA++A          KMT TYKDWHE+LP+ALHGYRTSVRTS
Sbjct: 681 EQFKINHRNSTPYRPKMNGAVEAANKNIKRIIEKMTITYKDWHEMLPFALHGYRTSVRTS 740

Query: 361 TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI 365
           TGATPFSLVY ME +LPLEVEIPSLRVLMEAKLDE EWI
Sbjct: 741 TGATPFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWI 779

[Close]

BLAST of PI0016406 vs. ExPASy TrEMBL
Match: A0A5A7T1X2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00190 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.5e-187
Identity = 326/399 (81.70%), Postives = 344/399 (86.22%), Query Frame = 0


Query: 1   MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
           MLVIHQVKEEWETRDAKLVPYSQYVTKL              +DN+MAD LATLAVMFDL
Sbjct: 68  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDL 127

Query: 61  NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
           NLE EL+PIQITKRD  AYCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKRTIRRL M
Sbjct: 128 NLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM 187

Query: 121 NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
           NFFLSGEVLYKRNHDMVLL C           +I+EGICGTHANGHMMARQILRS YYWT
Sbjct: 188 NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWT 247

Query: 181 MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
            M+S+CIKYARECKKCQIYMDKIH AAS LH+LSAPWPFSLWGMDVIGPIDPKASNGHRF
Sbjct: 248 TMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRF 307

Query: 241 ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
           ILVAID FTKWIEA SYCN+T+GVVLKFIKKELICRYGL EGIITDNAKNLNN+MMDELC
Sbjct: 308 ILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELC 367

Query: 301 EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
           EQFKINH+NSTPYRPKMNGA++A          KMT TYKDWHE+LP+ALHGYRTSVRTS
Sbjct: 368 EQFKINHRNSTPYRPKMNGAVEAANKNIKRIVEKMTITYKDWHEMLPFALHGYRTSVRTS 427

Query: 361 TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI 365
           T ATPFSLVY ME +LPLEVEIPSLRVLMEAKLDE EWI
Sbjct: 428 TEATPFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWI 466

[Close]

BLAST of PI0016406 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.7e-186
Identity = 323/399 (80.95%), Postives = 342/399 (85.71%), Query Frame = 0


Query: 1    MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
            MLVIHQVKEEWETR AKLVPYSQYVTKL              +DN+MAD LATLAVMFDL
Sbjct: 1435 MLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLAVMFDL 1494

Query: 61   NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
            NLE EL+PIQITKRD  AYCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKRTIRRL M
Sbjct: 1495 NLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM 1554

Query: 121  NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
            NFFLSGEVLYKRNHDMVLL C           +IHEGIC THANGHMMARQILRS YYWT
Sbjct: 1555 NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMIDIHEGICETHANGHMMARQILRSDYYWT 1614

Query: 181  MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
             M+S+CIKY RECKKCQIYMDKIH AASPLH+LSAPWPFSLWGMDVIGPIDPKASNGHRF
Sbjct: 1615 TMESDCIKYVRECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHRF 1674

Query: 241  ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
             LV+ID FTKWIE  S+CN+T+GVVLKFIKKELICRYGL EGIITDNAKNLNN+MMDELC
Sbjct: 1675 TLVSIDYFTKWIEVASFCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELC 1734

Query: 301  EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
            EQFKINH+NSTPYRPKMNGA++A          KMT TYKDWHE+LP+ALHGYRTSVRTS
Sbjct: 1735 EQFKINHRNSTPYRPKMNGAVEAANKNIKRIIEKMTITYKDWHEMLPFALHGYRTSVRTS 1794

Query: 361  TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI 365
            TGATPFSLVY MEA+LPLEVEIPSLRVLMEAKLDE EWI
Sbjct: 1795 TGATPFSLVYGMEAVLPLEVEIPSLRVLMEAKLDEAEWI 1833

[Close]

BLAST of PI0016406 vs. ExPASy TrEMBL
Match: A0A5D3DMD2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 9.0e-180
Identity = 316/397 (79.60%), Postives = 335/397 (84.38%), Query Frame = 0


Query: 1   MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
           MLVIHQVKEEWETRDAKLVPYSQYVTKL              +DN+MAD LATLAVMFDL
Sbjct: 466 MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLAVMFDL 525

Query: 61  NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
           NLE EL+PIQITKRD  AYCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKR IRRLTM
Sbjct: 526 NLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRAIRRLTM 585

Query: 121 NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
           NFFLSGEVLYKRNHDMVLL C           +IHEGICGTHANGHMMARQILRS YYWT
Sbjct: 586 NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIHEGICGTHANGHMMARQILRSGYYWT 645

Query: 181 MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
            M+S+CIKYAR+CKKCQIYMDKIH AASPLH+ SA WPFSLWGMDVIG IDPKASNGH F
Sbjct: 646 TMESDCIKYARKCKKCQIYMDKIHVAASPLHIFSASWPFSLWGMDVIGSIDPKASNGHPF 705

Query: 241 ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
           ILVAID FTKWIE  SYCN+T+GVVLKFIKKELICRYGL EGIIT+NAKNLNN+MMDEL 
Sbjct: 706 ILVAIDYFTKWIEVASYCNVTRGVVLKFIKKELICRYGLPEGIITNNAKNLNNEMMDELY 765

Query: 301 EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
           EQFKINH+N TPYRPKMN A++A          KMT TYKDWHE+LP+ALHGYRTSVRTS
Sbjct: 766 EQFKINHRNLTPYRPKMNEAVEAANKNIKRIIEKMTITYKDWHEMLPFALHGYRTSVRTS 825

Query: 361 TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVE 363
           T ATPFS VY ME +LPLEVEIPSLRVLMEAKLDEVE
Sbjct: 826 TWATPFSSVYGMEVVLPLEVEIPSLRVLMEAKLDEVE 862

[Close]

BLAST of PI0016406 vs. ExPASy TrEMBL
Match: A0A5A7UQ60 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00930 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.2e-179
Identity = 316/397 (79.60%), Postives = 335/397 (84.38%), Query Frame = 0


Query: 1   MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
           MLVIHQVKEEWETRDAKLVPYSQYVTKL              ++NQMAD LATLAVMFDL
Sbjct: 92  MLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKILFDHVPRENNQMADALATLAVMFDL 151

Query: 61  NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
           NLE EL+PIQITKRD  AYCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKR IRRLTM
Sbjct: 152 NLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRAIRRLTM 211

Query: 121 NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
           NFFLSGEVLYKRNHDMVLL C           +IHEGICGTHANGHMMARQILRS YYWT
Sbjct: 212 NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIHEGICGTHANGHMMARQILRSGYYWT 271

Query: 181 MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
            M+S+CIKYAR+CKKCQIYMDKIH AASPLH+ SA WPFSLWGMDVIG IDPKASNGH F
Sbjct: 272 TMESDCIKYARKCKKCQIYMDKIHVAASPLHIFSASWPFSLWGMDVIGSIDPKASNGHPF 331

Query: 241 ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
           ILVAID FTKWIE  SYCN+T+GVVLKFIKKELICRYGL EGIIT+NAKNLNN+MMDEL 
Sbjct: 332 ILVAIDYFTKWIEVASYCNVTRGVVLKFIKKELICRYGLPEGIITNNAKNLNNEMMDELY 391

Query: 301 EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
           EQFKINH+N TPYRPKMN A++A          KMT TYKDWHE+LP+ALHGYRTSVRTS
Sbjct: 392 EQFKINHRNLTPYRPKMNEAVEAANKNIKRIIEKMTITYKDWHEMLPFALHGYRTSVRTS 451

Query: 361 TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVE 363
           T ATPFS VY ME +LPLEVEIPSLRVLMEAKLDEVE
Sbjct: 452 TWATPFSSVYGMEVVLPLEVEIPSLRVLMEAKLDEVE 488

[Close]

BLAST of PI0016406 vs. NCBI nr
Match: XP_031741698.1 (uncharacterized protein LOC116403895 [Cucumis sativus])

HSP 1 Score: 677.2 bits (1746), Expect = 8.0e-191
Identity = 332/399 (83.21%), Postives = 350/399 (87.72%), Query Frame = 0


Query: 1    MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
            MLVIHQVKEEWETRDAKLVPYSQY+ KL              +DN+MAD LATLAVMF+L
Sbjct: 1799 MLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFEKISFDHVHREDNRMADALATLAVMFNL 1858

Query: 61   NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
            NLE ELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPY AS+NDKRTIRRL M
Sbjct: 1859 NLEYELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYGASKNDKRTIRRLAM 1918

Query: 121  NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
            NFFLSGEVLYKRNHDMVLL C           EIHEGICGTHANGH MARQILRS YYWT
Sbjct: 1919 NFFLSGEVLYKRNHDMVLLRCVDVEEAKQIMIEIHEGICGTHANGHTMARQILRSGYYWT 1978

Query: 181  MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
             M+S+CIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPKASNGHRF
Sbjct: 1979 TMESDCIKYARECKKCQIYMDRIHAAASPLHVLSAPWPFSLWGIDVIGPIDPKASNGHRF 2038

Query: 241  ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
            ILVAID FTKWIEA SYCN+T+GVVLKFIKKELICRYGL EGIITDNAKNLNN+MMDELC
Sbjct: 2039 ILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELC 2098

Query: 301  EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
            E+FKINH+NSTPYRPKMNGA++A          KMTTTYKDWHEILP+ALHGYRTSVRTS
Sbjct: 2099 EKFKINHRNSTPYRPKMNGAVEAANKNIKRIIEKMTTTYKDWHEILPFALHGYRTSVRTS 2158

Query: 361  TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI 365
            TGATPFSLVY MEA+LPLEVEIPSLRVLMEAKLDE EWI
Sbjct: 2159 TGATPFSLVYGMEAVLPLEVEIPSLRVLMEAKLDEAEWI 2197

[Close]

BLAST of PI0016406 vs. NCBI nr
Match: XP_031738857.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus])

HSP 1 Score: 675.2 bits (1741), Expect = 3.1e-190
Identity = 331/399 (82.96%), Postives = 349/399 (87.47%), Query Frame = 0


Query: 1    MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
            MLVIHQVKEEWETRDAKLVPYSQY+ KL              +DN+MAD LATLAVMF+L
Sbjct: 1800 MLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFEKISFDHVHREDNRMADALATLAVMFNL 1859

Query: 61   NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
            NLE ELYPIQITKRDA AYCMNIENDNKPWYFDIKQYIKCREYPY AS+NDKRTIRRL M
Sbjct: 1860 NLEYELYPIQITKRDAPAYCMNIENDNKPWYFDIKQYIKCREYPYGASKNDKRTIRRLAM 1919

Query: 121  NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
            NFFLSGEVLYKRNHDMVLL C           EIHEGICGTHANGH MARQILRS YYWT
Sbjct: 1920 NFFLSGEVLYKRNHDMVLLRCVDVEEAKQIMIEIHEGICGTHANGHTMARQILRSGYYWT 1979

Query: 181  MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
             M+S+CIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPKASNGHRF
Sbjct: 1980 TMESDCIKYARECKKCQIYMDRIHAAASPLHVLSAPWPFSLWGIDVIGPIDPKASNGHRF 2039

Query: 241  ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
            ILVAID FTKWIEA SYCN+T+GVVLKFIKKELICRYGL EGIITDNAKNLNN+MMDELC
Sbjct: 2040 ILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELC 2099

Query: 301  EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
            E+FKINH+NSTPYRPKMNGA++A          KMTTTYKDWHEILP+ALHGYRTSVRTS
Sbjct: 2100 EKFKINHRNSTPYRPKMNGAVEAANKNIKRIIEKMTTTYKDWHEILPFALHGYRTSVRTS 2159

Query: 361  TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI 365
            TGATPFSLVY MEA+LPLEVEIPSLRVLMEAKLDE EWI
Sbjct: 2160 TGATPFSLVYGMEAVLPLEVEIPSLRVLMEAKLDEAEWI 2198

[Close]

BLAST of PI0016406 vs. NCBI nr
Match: XP_031742240.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116404130 [Cucumis sativus])

HSP 1 Score: 674.1 bits (1738), Expect = 6.8e-190
Identity = 330/399 (82.71%), Postives = 349/399 (87.47%), Query Frame = 0


Query: 1    MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
            MLVIHQVKEEWETRDAKLVPYSQY+ KL              +DN+MAD LATLAVMF+L
Sbjct: 1708 MLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFEKISFDHVHREDNRMADALATLAVMFNL 1767

Query: 61   NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
            NLE ELYPIQITKRDA AYCMNIENDNKPWYFDIKQYIKCREYPY AS+NDKRTI+RL M
Sbjct: 1768 NLEYELYPIQITKRDAPAYCMNIENDNKPWYFDIKQYIKCREYPYGASKNDKRTIKRLAM 1827

Query: 121  NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
            NFFLSGEVLYKRNHDMVLL C           EIHEGICGTHANGH MARQILRS YYWT
Sbjct: 1828 NFFLSGEVLYKRNHDMVLLRCVDVEEAKQIMIEIHEGICGTHANGHTMARQILRSGYYWT 1887

Query: 181  MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
             M+S+CIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPKASNGHRF
Sbjct: 1888 TMESDCIKYARECKKCQIYMDRIHAAASPLHVLSAPWPFSLWGIDVIGPIDPKASNGHRF 1947

Query: 241  ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
            ILVAID FTKWIEA SYCN+T+GVVLKFIKKELICRYGL EGIITDNAKNLNN+MMDELC
Sbjct: 1948 ILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELC 2007

Query: 301  EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
            E+FKINH+NSTPYRPKMNGA++A          KMTTTYKDWHEILP+ALHGYRTSVRTS
Sbjct: 2008 EKFKINHRNSTPYRPKMNGAVEAANKNIKRIIEKMTTTYKDWHEILPFALHGYRTSVRTS 2067

Query: 361  TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI 365
            TGATPFSLVY MEA+LPLEVEIPSLRVLMEAKLDE EWI
Sbjct: 2068 TGATPFSLVYGMEAVLPLEVEIPSLRVLMEAKLDEAEWI 2106

[Close]

BLAST of PI0016406 vs. NCBI nr
Match: XP_031741309.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus])

HSP 1 Score: 672.9 bits (1735), Expect = 1.5e-189
Identity = 330/399 (82.71%), Postives = 348/399 (87.22%), Query Frame = 0


Query: 1    MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
            MLVIHQVKEEWETRDAKLVPYSQY+ KL              +DN+MAD LATLAVMF+L
Sbjct: 1785 MLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFEKISFDHVHREDNRMADALATLAVMFNL 1844

Query: 61   NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
            NLE ELYPIQITKRDA AYCMNIENDNKPWYFDIKQYIKCREYPY AS+NDKRTIRRL M
Sbjct: 1845 NLEYELYPIQITKRDAPAYCMNIENDNKPWYFDIKQYIKCREYPYGASKNDKRTIRRLAM 1904

Query: 121  NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
            NFFLSGEVLYKRNHDMVLL C           EIHEGICGTHANGH MARQILRS YYWT
Sbjct: 1905 NFFLSGEVLYKRNHDMVLLRCVDVEEAKQIMIEIHEGICGTHANGHTMARQILRSGYYWT 1964

Query: 181  MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
             M+S+CIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPKASNGHRF
Sbjct: 1965 TMESDCIKYARECKKCQIYMDRIHAAASPLHVLSAPWPFSLWGIDVIGPIDPKASNGHRF 2024

Query: 241  ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
            ILVAID FTKWIEA SYCN+T+GVVLKFIKKELICRYGL EGIITDNAKNLNN+MMDELC
Sbjct: 2025 ILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELC 2084

Query: 301  EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
            E+FKINH+NSTPY PKMNGA++A          KMTTTYKDWHEILP+ALHGYRTSVRTS
Sbjct: 2085 EKFKINHRNSTPYXPKMNGAVEAANKNIKRIIEKMTTTYKDWHEILPFALHGYRTSVRTS 2144

Query: 361  TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI 365
            TGATPFSLVY MEA+LPLEVEIPSLRVLMEAKLDE EWI
Sbjct: 2145 TGATPFSLVYGMEAVLPLEVEIPSLRVLMEAKLDEAEWI 2183

[Close]

BLAST of PI0016406 vs. NCBI nr
Match: XP_031738551.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus])

HSP 1 Score: 670.6 bits (1729), Expect = 7.5e-189
Identity = 329/399 (82.46%), Postives = 347/399 (86.97%), Query Frame = 0


Query: 1    MLVIHQVKEEWETRDAKLVPYSQYVTKL--------------KDNQMADVLATLAVMFDL 60
            MLVIHQVKEEWETRDAKL PYSQY+ KL              +DN+MAD LATLAVMF+L
Sbjct: 2132 MLVIHQVKEEWETRDAKLXPYSQYIAKLSQNFEKISFDHVHREDNRMADALATLAVMFNL 2191

Query: 61   NLECELYPIQITKRDASAYCMNIENDNKPWYFDIKQYIKCREYPYRASENDKRTIRRLTM 120
            NLE ELYPIQITKRDA AYCMNIENDNKPWYFDIKQYIKCREYPY AS+N KRTIRRL M
Sbjct: 2192 NLEYELYPIQITKRDAPAYCMNIENDNKPWYFDIKQYIKCREYPYGASKNXKRTIRRLAM 2251

Query: 121  NFFLSGEVLYKRNHDMVLLWC-----------EIHEGICGTHANGHMMARQILRSSYYWT 180
            NFFLSGEVLYKRNHDMVLL C           EIHEGICGTHANGH MARQILRS YYWT
Sbjct: 2252 NFFLSGEVLYKRNHDMVLLRCVDVEEAKQIMIEIHEGICGTHANGHTMARQILRSGYYWT 2311

Query: 181  MMKSNCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRF 240
             M+S+CIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPKASNGHRF
Sbjct: 2312 TMESDCIKYARECKKCQIYMDRIHAAASPLHVLSAPWPFSLWGIDVIGPIDPKASNGHRF 2371

Query: 241  ILVAIDNFTKWIEATSYCNITKGVVLKFIKKELICRYGLLEGIITDNAKNLNNQMMDELC 300
            ILVAID FTKWIEA SYCN+T+GVVLKFIKKELICRYGL EGIITDNAKNLNN+MMDELC
Sbjct: 2372 ILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELC 2431

Query: 301  EQFKINHQNSTPYRPKMNGAIKA----------KMTTTYKDWHEILPYALHGYRTSVRTS 360
            E+FKINH+NSTPYRPKMNGA++A          KMTTTYKDWHEILP+ALHGYRTSVRTS
Sbjct: 2432 EKFKINHRNSTPYRPKMNGAVEAANKNIKRIIEKMTTTYKDWHEILPFALHGYRTSVRTS 2491

Query: 361  TGATPFSLVYDMEAILPLEVEIPSLRVLMEAKLDEVEWI 365
            TGATPFSLVY MEA+LPLEVEIPSLRVLMEAKLDE EWI
Sbjct: 2492 TGATPFSLVYGMEAVLPLEVEIPSLRVLMEAKLDEAEWI 2530

The following BLAST results are available for this feature:

BLAST of PI0016406 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P03360	1.7e-10	28.48	Gag-Pol polyprotein (Fragment) OS=Avian reticuloendotheliosis virus OX=11636 GN=...	[more]
Q09575	1.7e-10	25.81	Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=...	[more]
P03355	4.2e-09	26.98	Gag-Pol polyprotein OS=Moloney murine leukemia virus (isolate Shinnick) OX=92830...	[more]
P10273	5.5e-09	31.62	Gag-Pol polyprotein OS=Feline leukemia virus OX=11768 GN=pol PE=3 SV=2	[more]
P03359	5.5e-09	33.09	Gag-Pol polyprotein OS=Woolly monkey sarcoma virus OX=11970 GN=pol PE=3 SV=2	[more]

BLAST of PI0016406 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0A1	1.1e-188	81.95	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 ...	[more]
A0A5A7T1X2	1.5e-187	81.70	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00190 ...	[more]
A0A5A7T7R4	1.7e-186	80.95	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00282...	[more]
A0A5D3DMD2	9.0e-180	79.60	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160...	[more]
A0A5A7UQ60	1.2e-179	79.60	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00930...	[more]

BLAST of PI0016406 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741698.1	8.0e-191	83.21	uncharacterized protein LOC116403895 [Cucumis sativus]	[more]
XP_031738857.1	3.1e-190	82.96	LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]	[more]
XP_031742240.1	6.8e-190	82.71	LOW QUALITY PROTEIN: uncharacterized protein LOC116404130 [Cucumis sativus]	[more]
XP_031741309.1	1.5e-189	82.71	LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]	[more]
XP_031738551.1	7.5e-189	82.46	LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]	[more]

BLAST of PI0016406 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 193..290 e-value: 2.9E-11 score: 43.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 187..356 score: 17.972221
None	No IPR available	GENE3D	1.10.340.70		coord: 81..174 e-value: 9.1E-6 score: 27.8
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 2..254
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..254
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 186..362 e-value: 3.5E-42 score: 145.9
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 189..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016406.1	PI0016406.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding