Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACAAATACGTGTCATTTATGTTGTTTACAAATGGCAATATGATTGACGGTGTCGATGGGGTTGATTATGATCAACCTCCATGTGGGAATTTTAGTATAAATGCAAACAGTGGGATTGTTTATGAACAATTCATCCAAATGGTGGGGTTATCACTTGGTGTAGATATAAGTTCGAACCAAATAGAGATAATATATAGACACCCTAATTTAACCCCATCTGGATCCGTAAGCTTTATACCATTCCCTATTTCGAATGAACAAGCAATGAACACCATGTTTTCAATTGCACTACCGTTTCCGAACATGATGCATTTGTACGTGACTGTGAGTAAGATAGATTTGGGCATCGATTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCTGAGTCAGATGCAAAACCAATGTGCGTTGAAGAAGAAATGGTTGCTAATAACGACTATAGAGATTTTAGAACAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGAGCGTGAACATGAATTTCCCTCAAATACATTCACTGACCTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTACAGTCCCAGTGGTGACTGACAACACGAAATTGTATAAGGGAATGATCTGTGAAGACAAAGAAACACTACAAGATATGGTCAAGTGTTTTGCTATTAAGAGTCACGCACCATATGAAATAGTGGAGTCAACGCCGACAAAGTGGGTCATCCGATGTAAGAAGTCGGATGAAGGTTGCAGATGGAGACTTCGTGCAATACTGAAGAAATCTCATGGTTTATTTGAGATCACACAATTGTCTGACCAACATACATGCTTTTACTCAGAACTTAGTCAAAGTCATGTGCAGTTGGATTCTTCAATGATTGCACGAGAGTTTTGTGAATCCGTTCGAGAAAAACCATCGATCAGTGTACCACAGCTGCAATCCATGATTAAGGAAAATTTCGGCTACCATGTTCCTTACCATAGAGCTTGGGATGGGAAAAGAAAAGCGGTAGCCAAAGTGTTTGGCGATTGGGATGAGTCGTACAAACTACTACCTAGATGGTTGTACATGGTTAAACATACAAATCCTGGAACAGTGGTTGAATGGAGGGTACAAAGCACACCTACAGAAGGCCACGTCATACTATCATCTGTATTTTGGGCATTTGGTCCCTGTATAGAAGCTTTTAGTAGATGTATGCCACTTATTCAGATCGATGGTACTCACTTGTACGGCAAGTATAGAGGAAAATTATTAATTGCCACATCTGTCGATTCCAACGCGCATCTTCTACCATTAGCATTTGCCATTGTGGAAGAAGAGTCTGCAGATTCATGGGGATGGTTTTTACAACATCTAAAAAAAATTGTGCCCCACGATGAGGTATGCTTGGTTTCTGATCGACATGCTGGTATCATATCAGTAGTGAATAATCCGGAGAATGGGTGGACAGGACCGAAATGCCATCATAGATTTTGTTTACGCCATATTGTCAGCAATTTCCACAAAAGGTATAAATTCACACCTTTGAAGAACTATGCTTACCGTGCCGGATGTCAATTCCAGATCCGAAAGTTTGAGAAGACAATTCAAGATCTAATGAGACTAAATAGAAGCTGTATAAGTTTTATTGATGACATCCCTATAGAGCAGTGGGCTCAAGCACATGATGGGGGATTTCGGTATGGGTGGATGATGACGAACCTATCAGAGTACATGAACGGAGTCCTCAAAGGAGCTCGGATGTTGCCAATAAATGCTCTAGCTCAAATTACCTTCTTCAAATGTGTGAATTATTTTGAAAAAAGGCGAGAGGAAATAAGAGCTGCATCGGAACGTTGAGATAAACACACCGGGTACGAATCATATTTACAGTAGTTAATAGATTTTTTTTATGTGCATGTTATATTAAGTCCATCAATATTTAGGTACGTACTTCAAAAAAATATTAAAATGGGCTGCGAGATCCAGTAAGCATGAAGTACAATCATATGATCGATTTGAAGGCACTTTTCATGTGAAAACTGGACGTCATGGCTTGAATTCTAAAGAAGGAAATATTCAAATACTACGGTTAAGTGCGTCCGAGCGGTACTGTTCGTGTAACAAGTGGCAAGCCTTCGGTATTCCATGCTCACATTTCATGGCAGTTTGTTCACGGTTTAACATGAACTACGAAGAATTCATTGAGGATTACTACAAAATTTCAACTTACGCTGCATGTTATGCTCCTCAATTTCAACCTGTACCGCATGAAGATTACTGGATCACGCTCACAAGTATGCCTGTCTTACATCCAGATCCACGGTTGTTGAGGAAACCAGGCAGACCAAAGAGTTCACGATATCACAACGAGATGGATTGGGCAGAACCAAGTGCTCAACAACGATGCTCGTTTTGTGGTTAACTTGGTCACAACCGACGCAAATGTACTTTGTTATTGAGACAGGCACCTGATAGTTAGAGAAGTTTTGTGTACTCAATATGCAGTGTATTTGTCATTGTTACTTATAAAATAGAAACATTTTAGACCGTTTGTTACCGTAAGTTGTAAATAATTTATATTTAATTAAAATTGACATATTTTTTTCTTATGTTCTTAGTGCTACAATCATCAATGTTTAATTAATAAACAAATAAATTATTTTTATGTAGATAATGACATTAAACCCAGGACCAATCGATCCTGAAGTTTTTATGATCAGAACATTCACCAATCAGCAGTCGTTTGGGACGATCGAACTACACCCGAGATGAATTGTAGACGACGTGAGGCGATTGTTTATCGCACTATCCCACTTCATCGTAGCATACTTCCACTACTTCATGCTTCAGGATTTTATGGGATTGACAGGTTGGGGTTCATTCAGCTAGATTGGCATCTCATCACTGCACTTGTTGAGAGATGGAGACCAGAGACGCATACATTTCACATGCCGACTGGAGAGTGCACAGTGACATTACAGGATGTGGAAGTTTTGATGGGATTACCTGTTGATGGCGAGTCTGTTACTGGTCAGAGCCATGATGATTGGTTGCATCTTTGCCAAGTGTTGCTCGGTGTGACCCCACCTGCTGAACAAATCAGGGGTTCGAGATTATGTTTAACATGGCTAGGGGTAGAATTTCCTGGATTGGCTGATGATGCTAACGAGAAAACTATCGCAAGATATGCACGGGCATATATTTTGCAGTTGATGGGTGGAAGTATGTTTGCAAATAAGTCAACTCGTTACGTGCACCTAATGTTCTTGCCGTTTTTAGCTAATCTGCACGAAACGGGACGATATTCTTGGGGTGGAGCCTGTTTAGCATTGTTGTATAGACAGTTATGCAATGCAGCAAAACAAGGCATTCGTGATATTGCTGGACCATTAATACTGTTACAGCTATGGGCTTGGGAACGATTCCCAATAGTGGCTCCACAACTTCTGCACGTTAATGATCATCAACTACACGGACGAGCTTATGGTTCGAGATATGTTCTTTTAATTTAGTTTAGATTAACCATAATTTTTTATACGTAATAGATTTATAATATGAAATATTGGTTATTGGTTGAACAATACAGATGGCGAAATCAATTTTGTGTCACCAGGTCGGCTACACATGTAGTCTCTCAATATAGGTACATGTTTGATCTTCAACCTGATCAGGTACGTTGTGCTGAATTTGAATTTTAAGTTACATATTATCTGTTTAATATTAGTTGTTCATATAATATAATATATTGTGTTTAAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCCGAATTTCTGTACGAATGGTCACGACATATGGCAGACGGTTAGTCCTCTCATATGTTTTCACATCGGTGAGTGGCATCATCCTGACAGAACACTCAGACAGTTTGGTATTATATAAGATGTTCCAGTTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGAACGGCTGATTGGTCCAATAGAGTTGCTCATTTGGTGATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGGTACGTATTTAAATATTGTCTAATTGTTTTTAATACAAATTAATTTTTAATAGTTTCTAATTAATTTTAATATTTCACAGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAGTAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCAGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACATGA
mRNA sequence
ATGGCAGACAAATACGTGTCATTTATGTTGTTTACAAATGGCAATATGATTGACGGTGTCGATGGGGTTGATTATGATCAACCTCCATGTGGGAATTTTAGTATAAATGCAAACAGTGGGATTGTTTATGAACAATTCATCCAAATGGTGGGGTTATCACTTGGTGTAGATATAAGTTCGAACCAAATAGAGATAATATATAGACACCCTAATTTAACCCCATCTGGATCCGTAAGCTTTATACCATTCCCTATTTCGAATGAACAAGCAATGAACACCATGTTTTCAATTGCACTACCGTTTCCGAACATGATGCATTTGTACGTGACTGTGAGTAAGATAGATTTGGGCATCGATTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCTGAGTCAGATGCAAAACCAATGTGCGTTGAAGAAGAAATGGTTGCTAATAACGACTATAGAGATTTTAGAACAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGAGCGTGAACATGAATTTCCCTCAAATACATTCACTGACCTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTACAGTCCCAGTGGTGACTGACAACACGAAATTGTATAAGGGAATGATCTGTGAAGACAAAGAAACACTACAAGATATGGTCAAATCCACGGTTGTTGAGGAAACCAGGCAGACCAAAGAGTTCACGATATCACAACGAGATGGATTGGGCAGAACCAAGTGCTCAACAACGATGCTCATAATGACATTAAACCCAGGACCAATCGATCCTGAAGTTTTTATGATCAGAACATTCACCAATCAGCAGTCATGGCGAAATCAATTTTGTGTCACCAGGTCGGCTACACATGTAGTCTCTCAATATAGGTACATGTTTGATCTTCAACCTGATCAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCCGAATTTCTGTACGAATGGTCACGACATATGGCAGACGGTTAGTCCTCTCATATGTTTTCACATCGATGTTCCAGTTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGAACGGCTGATTGGTCCAATAGAGTTGCTCATTTGGTGATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAGTAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCAGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACATGA
Coding sequence (CDS)
ATGGCAGACAAATACGTGTCATTTATGTTGTTTACAAATGGCAATATGATTGACGGTGTCGATGGGGTTGATTATGATCAACCTCCATGTGGGAATTTTAGTATAAATGCAAACAGTGGGATTGTTTATGAACAATTCATCCAAATGGTGGGGTTATCACTTGGTGTAGATATAAGTTCGAACCAAATAGAGATAATATATAGACACCCTAATTTAACCCCATCTGGATCCGTAAGCTTTATACCATTCCCTATTTCGAATGAACAAGCAATGAACACCATGTTTTCAATTGCACTACCGTTTCCGAACATGATGCATTTGTACGTGACTGTGAGTAAGATAGATTTGGGCATCGATTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCTGAGTCAGATGCAAAACCAATGTGCGTTGAAGAAGAAATGGTTGCTAATAACGACTATAGAGATTTTAGAACAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGAGCGTGAACATGAATTTCCCTCAAATACATTCACTGACCTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTACAGTCCCAGTGGTGACTGACAACACGAAATTGTATAAGGGAATGATCTGTGAAGACAAAGAAACACTACAAGATATGGTCAAATCCACGGTTGTTGAGGAAACCAGGCAGACCAAAGAGTTCACGATATCACAACGAGATGGATTGGGCAGAACCAAGTGCTCAACAACGATGCTCATAATGACATTAAACCCAGGACCAATCGATCCTGAAGTTTTTATGATCAGAACATTCACCAATCAGCAGTCATGGCGAAATCAATTTTGTGTCACCAGGTCGGCTACACATGTAGTCTCTCAATATAGGTACATGTTTGATCTTCAACCTGATCAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCCGAATTTCTGTACGAATGGTCACGACATATGGCAGACGGTTAGTCCTCTCATATGTTTTCACATCGATGTTCCAGTTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGAACGGCTGATTGGTCCAATAGAGTTGCTCATTTGGTGATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAGTAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCAGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACATGA
Protein sequence
MADKYVSFMLFTNGNMIDGVDGVDYDQPPCGNFSINANSGIVYEQFIQMVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVANNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKLYKGMICEDKETLQDMVKSTVVEETRQTKEFTISQRDGLGRTKCSTTMLIMTLNPGPIDPEVFMIRTFTNQQSWRNQFCVTRSATHVVSQYRYMFDLQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLICFHIDVPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADVSPMMMMPAFGT
Homology
BLAST of PI0016234 vs. ExPASy Swiss-Prot
Match:
Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 1.9e-15
Identity = 55/166 (33.13%), Postives = 75/166 (45.18%), Query Frame = 0
Query: 283 WRNQFCVTRSATHVVSQYRYMFDLQPD-QIIWEPYKA-VMDSLPNFCTNGHDIWQTVSPL 342
WR + + YR FD Q D Q+IW+PY ++ +P C +G +IW+TV+PL
Sbjct: 290 WRASLSHKENPRGGLDFYRDQFDQQKDEQVIWQPYTPDLLAKIPLICVSGENIWRTVAPL 349
Query: 343 ICF-----------------HIDVPVDCNTEPLLHNIDLR---TADWSNRVAHLVMRWLN 402
ICF H +P C+ E LH ID R DWS R + + W
Sbjct: 350 ICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEA 409
Query: 403 RRRFIATG---CSFGQFDVDVTPEYINWYRNITRLYIT-----RPG 419
R + +G CS +D Y+ WYR ITR I+ RPG
Sbjct: 410 RVSSVVSGEPECS----PMDYNDPYMEWYRRITRRIISPMNERRPG 451
BLAST of PI0016234 vs. ExPASy TrEMBL
Match:
A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)
HSP 1 Score: 416.0 bits (1068), Expect = 2.3e-112
Identity = 353/1153 (30.62%), Postives = 400/1153 (34.69%), Query Frame = 0
Query: 49 MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMMHLY 108
MVGLSLGVD+SS+QIEIIYRHPNLT SG+V F+PFPISNEQ MNTMFSIALPFPNM+HLY
Sbjct: 1 MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALPFPNMVHLY 60
Query: 109 VTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVANNDYRDFRTETDDEFEEM 168
VTVS +D I+LNVE R VEEYVDV+PESDA P+C EEEMVA N+Y +FRTETDDEFEEM
Sbjct: 61 VTVSMVDTAINLNVEPRYVEEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDEFEEM 120
Query: 169 EFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKLYKGMICEDKETLQDMVKS 228
+FD E+E PSNTFTDLDMNAVD ++EHDPI VP+VTDNTKLY GMICE+K+ LQ MVK
Sbjct: 121 DFDGCEYEVPSNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQHMVKC 180
Query: 229 ---------TVVEET--------------------------------------------- 288
VVE T
Sbjct: 181 FAIKSHAPYEVVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSE 240
Query: 289 --------------RQTKEFT--------------------------------------- 348
R+ EF
Sbjct: 241 LSQSHVQLDSSMLAREFFEFVREKPSISVASLQSMIKEKFGYHVSYRRAWDGKKKSVAKV 300
Query: 349 ------------------------------------------------------------ 408
Sbjct: 301 FGDWDESYKLLPRWLYMVKHTNPGTLVEWRVQATPIEGHVILSSVFWAFGPCIEAFSRSF 360
Query: 409 -----------------------------ISQR--------------------------- 468
+S R
Sbjct: 361 VVVEEESADSWGWFLRHLKQIVTHDEICLLSDRHAGIISAVNNPDNGWTGANCHHRFCLR 420
Query: 469 ------------------------------------DGLGRTKCSTTML----------- 516
DG R TT L
Sbjct: 421 HVIRKFDKAIQDLMRINSRCMSFFYDIPIEKWTQAHDGGFRYGWMTTNLSECMNGVFKGA 480
BLAST of PI0016234 vs. ExPASy TrEMBL
Match:
A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)
HSP 1 Score: 384.0 bits (985), Expect = 9.6e-103
Identity = 185/251 (73.71%), Postives = 208/251 (82.87%), Query Frame = 0
Query: 283 WRNQFCVTRSATHVVSQYRYMFD-LQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLI 342
WR+QFCVTRSATHVVSQYRYMFD LQP QI+WEPYK V+DSLP+FCTNGH+IW+T+SPLI
Sbjct: 255 WRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLI 314
Query: 343 CFHID-----------------VPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRF 402
CF+I VP DCNTEPLLHNIDLRTADWS+RVAHLVMRW NRRRF
Sbjct: 315 CFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRF 374
Query: 403 IATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDI 462
ATG QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+I
Sbjct: 375 TATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVADDPQQVLNI 434
Query: 463 CNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADV 516
CN NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS V
Sbjct: 435 CNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYV 494
BLAST of PI0016234 vs. ExPASy TrEMBL
Match:
A0A5D3CIZ8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00630 PE=4 SV=1)
HSP 1 Score: 384.0 bits (985), Expect = 9.6e-103
Identity = 270/716 (37.71%), Postives = 323/716 (45.11%), Query Frame = 0
Query: 91 MNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVA 150
MNTMFSIALPFPNM+HLYVTVS +DL I+LN E + VEEYVDVD E DA P+C EEEMVA
Sbjct: 1 MNTMFSIALPFPNMVHLYVTVSMVDLAINLNAEPKYVEEYVDVDLELDAPPVCHEEEMVA 60
Query: 151 NNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKL 210
N+Y +FRTETDDEFEE++FD E+E PSNTFTDLDM+ VD ++E DPI V +VTDNTKL
Sbjct: 61 TNEYTEFRTETDDEFEEIDFDGCEYEVPSNTFTDLDMDTVDGIQEDDPIIVSMVTDNTKL 120
Query: 211 YKGMICEDKETLQDMVKS---------TVVEET--------------------------- 270
Y GMICE+KE LQ MVK VVE T
Sbjct: 121 YTGMICENKEMLQHMVKCFAIKSHAPYEVVESTSTKWVIRWLWMVKKKAVAKVFGDWDES 180
Query: 271 -----------RQTKEFTI----------------------------------------- 330
+ T T+
Sbjct: 181 YKLLPRWLYMVKHTNPGTLVEWRVQATPIEGHVILSSVFWAFGPCIKAFSRCRPLIQIDG 240
Query: 331 ------------------------SQRDGLGRTK-------------------------- 390
+ +G+ K
Sbjct: 241 THLYALEKILKWSARSSKHEVQSYHRSEGIFHVKTGRHELNSKGGNIQMLKLNASERYCS 300
Query: 391 ----------CSTTMLIMTLNPGPIDPEVFMIRT-------------------------- 450
CS M I + ++ V +I T
Sbjct: 301 CNKWQAFGIPCSHFMAIHRCSENQVNQRVHVITTRWIGQNKVLNNDVHYVVNLIITDGGF 360
Query: 451 ----------------FTNQQSWR------------------------------------ 510
+ WR
Sbjct: 361 YGLARLGFVQLDWHLIIALLERWRPEMHTFHMSVGECTITLQDVKVLVGLPADGEPVTDQ 420
Query: 511 -------------------------------------------NQFCVTRSATHVVSQY- 516
++ +TR A + Q
Sbjct: 421 MHDVWLHVCQKLLGVIPPLEQIRGQRLSLTWLGVEFHELANDADEETITRYARAYILQLM 480
BLAST of PI0016234 vs. ExPASy TrEMBL
Match:
A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)
HSP 1 Score: 380.9 bits (977), Expect = 8.2e-102
Identity = 184/251 (73.31%), Postives = 208/251 (82.87%), Query Frame = 0
Query: 283 WRNQFCVTRSATHVVSQYRYMFD-LQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLI 342
WR+QFCVTR ATHVVSQYRYMFD LQP QI+WEPYK V+DSLP+FCTNGH+IW+T+SPLI
Sbjct: 142 WRDQFCVTRLATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLI 201
Query: 343 CFHID-----------------VPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRF 402
CF+I VP DCNTEPLLHNIDLRTADWS+RVAHLVMRW NRRRF
Sbjct: 202 CFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRF 261
Query: 403 IATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDI 462
ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+I
Sbjct: 262 TATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNI 321
Query: 463 CNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADV 516
CN NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS V
Sbjct: 322 CNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYV 381
BLAST of PI0016234 vs. ExPASy TrEMBL
Match:
A0A5D3BR52 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001490 PE=4 SV=1)
HSP 1 Score: 348.6 bits (893), Expect = 4.5e-92
Identity = 205/425 (48.24%), Postives = 236/425 (55.53%), Query Frame = 0
Query: 91 MNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVA 150
MNTMFS+ALPFPNM+HLYVTVS +D I+LNVE R VEEYVDV+PESDA P+C EEEMVA
Sbjct: 1 MNTMFSVALPFPNMVHLYVTVSMVDTVINLNVEPRYVEEYVDVEPESDALPVCHEEEMVA 60
Query: 151 NNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKL 210
N+Y +FRTETDDEFEEM+FD E+E PSNTFTDLDMNAVD+++EHDPI VP+VTDNTKL
Sbjct: 61 TNEYTEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDAIQEHDPIIVPMVTDNTKL 120
Query: 211 YKGMICEDKETLQDMVKSTVVEETRQTKEFTISQRDGLGRTKCSTTMLIMTLNPGPIDPE 270
Sbjct: 121 ------------------------------------------------------------ 180
Query: 271 VFMIRTFTNQQSWRNQFCVTRSATHVVSQYRYMFDLQPDQIIWEPYKAVMDSLPNFCTNG 330
Sbjct: 181 ------------------------------------------------------------ 240
Query: 331 HDIWQTVSPLICFHIDVPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRFIATGCS 390
TADWS+RVAHLVMRW NRRRF ATG
Sbjct: 241 ---------------------------------TADWSDRVAHLVMRWHNRRRFTATGPP 272
Query: 391 FGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNSNER 450
QFD+DVT EY +WY+NI++LYIT+ GAA+ HLRSNN RLR+VADDPQQVL+ICN NE+
Sbjct: 301 IEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQ 272
Query: 451 YMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADVSPMMMM 510
YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ +TQS VSP+MMM
Sbjct: 361 YMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMM 272
Query: 511 PAFGT 516
P F T
Sbjct: 421 PTFET 272
BLAST of PI0016234 vs. NCBI nr
Match:
TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 416.0 bits (1068), Expect = 4.7e-112
Identity = 353/1153 (30.62%), Postives = 400/1153 (34.69%), Query Frame = 0
Query: 49 MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMMHLY 108
MVGLSLGVD+SS+QIEIIYRHPNLT SG+V F+PFPISNEQ MNTMFSIALPFPNM+HLY
Sbjct: 1 MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALPFPNMVHLY 60
Query: 109 VTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVANNDYRDFRTETDDEFEEM 168
VTVS +D I+LNVE R VEEYVDV+PESDA P+C EEEMVA N+Y +FRTETDDEFEEM
Sbjct: 61 VTVSMVDTAINLNVEPRYVEEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDEFEEM 120
Query: 169 EFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKLYKGMICEDKETLQDMVKS 228
+FD E+E PSNTFTDLDMNAVD ++EHDPI VP+VTDNTKLY GMICE+K+ LQ MVK
Sbjct: 121 DFDGCEYEVPSNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQHMVKC 180
Query: 229 ---------TVVEET--------------------------------------------- 288
VVE T
Sbjct: 181 FAIKSHAPYEVVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSE 240
Query: 289 --------------RQTKEFT--------------------------------------- 348
R+ EF
Sbjct: 241 LSQSHVQLDSSMLAREFFEFVREKPSISVASLQSMIKEKFGYHVSYRRAWDGKKKSVAKV 300
Query: 349 ------------------------------------------------------------ 408
Sbjct: 301 FGDWDESYKLLPRWLYMVKHTNPGTLVEWRVQATPIEGHVILSSVFWAFGPCIEAFSRSF 360
Query: 409 -----------------------------ISQR--------------------------- 468
+S R
Sbjct: 361 VVVEEESADSWGWFLRHLKQIVTHDEICLLSDRHAGIISAVNNPDNGWTGANCHHRFCLR 420
Query: 469 ------------------------------------DGLGRTKCSTTML----------- 516
DG R TT L
Sbjct: 421 HVIRKFDKAIQDLMRINSRCMSFFYDIPIEKWTQAHDGGFRYGWMTTNLSECMNGVFKGA 480
BLAST of PI0016234 vs. NCBI nr
Match:
TYK11154.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 384.0 bits (985), Expect = 2.0e-102
Identity = 270/716 (37.71%), Postives = 323/716 (45.11%), Query Frame = 0
Query: 91 MNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVA 150
MNTMFSIALPFPNM+HLYVTVS +DL I+LN E + VEEYVDVD E DA P+C EEEMVA
Sbjct: 1 MNTMFSIALPFPNMVHLYVTVSMVDLAINLNAEPKYVEEYVDVDLELDAPPVCHEEEMVA 60
Query: 151 NNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKL 210
N+Y +FRTETDDEFEE++FD E+E PSNTFTDLDM+ VD ++E DPI V +VTDNTKL
Sbjct: 61 TNEYTEFRTETDDEFEEIDFDGCEYEVPSNTFTDLDMDTVDGIQEDDPIIVSMVTDNTKL 120
Query: 211 YKGMICEDKETLQDMVKS---------TVVEET--------------------------- 270
Y GMICE+KE LQ MVK VVE T
Sbjct: 121 YTGMICENKEMLQHMVKCFAIKSHAPYEVVESTSTKWVIRWLWMVKKKAVAKVFGDWDES 180
Query: 271 -----------RQTKEFTI----------------------------------------- 330
+ T T+
Sbjct: 181 YKLLPRWLYMVKHTNPGTLVEWRVQATPIEGHVILSSVFWAFGPCIKAFSRCRPLIQIDG 240
Query: 331 ------------------------SQRDGLGRTK-------------------------- 390
+ +G+ K
Sbjct: 241 THLYALEKILKWSARSSKHEVQSYHRSEGIFHVKTGRHELNSKGGNIQMLKLNASERYCS 300
Query: 391 ----------CSTTMLIMTLNPGPIDPEVFMIRT-------------------------- 450
CS M I + ++ V +I T
Sbjct: 301 CNKWQAFGIPCSHFMAIHRCSENQVNQRVHVITTRWIGQNKVLNNDVHYVVNLIITDGGF 360
Query: 451 ----------------FTNQQSWR------------------------------------ 510
+ WR
Sbjct: 361 YGLARLGFVQLDWHLIIALLERWRPEMHTFHMSVGECTITLQDVKVLVGLPADGEPVTDQ 420
Query: 511 -------------------------------------------NQFCVTRSATHVVSQY- 516
++ +TR A + Q
Sbjct: 421 MHDVWLHVCQKLLGVIPPLEQIRGQRLSLTWLGVEFHELANDADEETITRYARAYILQLM 480
BLAST of PI0016234 vs. NCBI nr
Match:
KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 384.0 bits (985), Expect = 2.0e-102
Identity = 185/251 (73.71%), Postives = 208/251 (82.87%), Query Frame = 0
Query: 283 WRNQFCVTRSATHVVSQYRYMFD-LQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLI 342
WR+QFCVTRSATHVVSQYRYMFD LQP QI+WEPYK V+DSLP+FCTNGH+IW+T+SPLI
Sbjct: 255 WRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLI 314
Query: 343 CFHID-----------------VPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRF 402
CF+I VP DCNTEPLLHNIDLRTADWS+RVAHLVMRW NRRRF
Sbjct: 315 CFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRF 374
Query: 403 IATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDI 462
ATG QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+I
Sbjct: 375 TATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVADDPQQVLNI 434
Query: 463 CNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADV 516
CN NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS V
Sbjct: 435 CNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYV 494
BLAST of PI0016234 vs. NCBI nr
Match:
KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 380.9 bits (977), Expect = 1.7e-101
Identity = 184/251 (73.31%), Postives = 208/251 (82.87%), Query Frame = 0
Query: 283 WRNQFCVTRSATHVVSQYRYMFD-LQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLI 342
WR+QFCVTR ATHVVSQYRYMFD LQP QI+WEPYK V+DSLP+FCTNGH+IW+T+SPLI
Sbjct: 142 WRDQFCVTRLATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLI 201
Query: 343 CFHID-----------------VPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRF 402
CF+I VP DCNTEPLLHNIDLRTADWS+RVAHLVMRW NRRRF
Sbjct: 202 CFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRF 261
Query: 403 IATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDI 462
ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+I
Sbjct: 262 TATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNI 321
Query: 463 CNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADV 516
CN NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS V
Sbjct: 322 CNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYV 381
BLAST of PI0016234 vs. NCBI nr
Match:
TYK01570.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 348.6 bits (893), Expect = 9.3e-92
Identity = 205/425 (48.24%), Postives = 236/425 (55.53%), Query Frame = 0
Query: 91 MNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVA 150
MNTMFS+ALPFPNM+HLYVTVS +D I+LNVE R VEEYVDV+PESDA P+C EEEMVA
Sbjct: 1 MNTMFSVALPFPNMVHLYVTVSMVDTVINLNVEPRYVEEYVDVEPESDALPVCHEEEMVA 60
Query: 151 NNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKL 210
N+Y +FRTETDDEFEEM+FD E+E PSNTFTDLDMNAVD+++EHDPI VP+VTDNTKL
Sbjct: 61 TNEYTEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDAIQEHDPIIVPMVTDNTKL 120
Query: 211 YKGMICEDKETLQDMVKSTVVEETRQTKEFTISQRDGLGRTKCSTTMLIMTLNPGPIDPE 270
Sbjct: 121 ------------------------------------------------------------ 180
Query: 271 VFMIRTFTNQQSWRNQFCVTRSATHVVSQYRYMFDLQPDQIIWEPYKAVMDSLPNFCTNG 330
Sbjct: 181 ------------------------------------------------------------ 240
Query: 331 HDIWQTVSPLICFHIDVPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRFIATGCS 390
TADWS+RVAHLVMRW NRRRF ATG
Sbjct: 241 ---------------------------------TADWSDRVAHLVMRWHNRRRFTATGPP 272
Query: 391 FGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNSNER 450
QFD+DVT EY +WY+NI++LYIT+ GAA+ HLRSNN RLR+VADDPQQVL+ICN NE+
Sbjct: 301 IEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQ 272
Query: 451 YMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADVSPMMMM 510
YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ +TQS VSP+MMM
Sbjct: 361 YMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMM 272
Query: 511 PAFGT 516
P F T
Sbjct: 421 PTFET 272
BLAST of PI0016234 vs. TAIR 10
Match:
AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )
HSP 1 Score: 85.5 bits (210), Expect = 1.4e-16
Identity = 55/166 (33.13%), Postives = 75/166 (45.18%), Query Frame = 0
Query: 283 WRNQFCVTRSATHVVSQYRYMFDLQPD-QIIWEPYKA-VMDSLPNFCTNGHDIWQTVSPL 342
WR + + YR FD Q D Q+IW+PY ++ +P C +G +IW+TV+PL
Sbjct: 290 WRASLSHKENPRGGLDFYRDQFDQQKDEQVIWQPYTPDLLAKIPLICVSGENIWRTVAPL 349
Query: 343 ICF-----------------HIDVPVDCNTEPLLHNIDLR---TADWSNRVAHLVMRWLN 402
ICF H +P C+ E LH ID R DWS R + + W
Sbjct: 350 ICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEA 409
Query: 403 RRRFIATG---CSFGQFDVDVTPEYINWYRNITRLYIT-----RPG 419
R + +G CS +D Y+ WYR ITR I+ RPG
Sbjct: 410 RVSSVVSGEPECS----PMDYNDPYMEWYRRITRRIISPMNERRPG 451
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LNG5 | 1.9e-15 | 33.13 | Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BAB0 | 2.3e-112 | 30.62 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
A0A5A7VIP6 | 9.6e-103 | 73.71 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
A0A5D3CIZ8 | 9.6e-103 | 37.71 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
A0A5A7T598 | 8.2e-102 | 73.31 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
A0A5D3BR52 | 4.5e-92 | 48.24 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
Match Name | E-value | Identity | Description | |
TYJ95836.1 | 4.7e-112 | 30.62 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
TYK11154.1 | 2.0e-102 | 37.71 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
KAA0067080.1 | 2.0e-102 | 73.71 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
KAA0036767.1 | 1.7e-101 | 73.31 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
TYK01570.1 | 9.3e-92 | 48.24 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G48120.1 | 1.4e-16 | 33.13 | hydrolases;protein serine/threonine phosphatases | [more] |