PI0016234 (gene) Melon (PI 482460) v1

Overview
NamePI0016234
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Locationchr02: 2440659 .. 2445172 (+)
RNA-Seq ExpressionPI0016234
SyntenyPI0016234
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACAAATACGTGTCATTTATGTTGTTTACAAATGGCAATATGATTGACGGTGTCGATGGGGTTGATTATGATCAACCTCCATGTGGGAATTTTAGTATAAATGCAAACAGTGGGATTGTTTATGAACAATTCATCCAAATGGTGGGGTTATCACTTGGTGTAGATATAAGTTCGAACCAAATAGAGATAATATATAGACACCCTAATTTAACCCCATCTGGATCCGTAAGCTTTATACCATTCCCTATTTCGAATGAACAAGCAATGAACACCATGTTTTCAATTGCACTACCGTTTCCGAACATGATGCATTTGTACGTGACTGTGAGTAAGATAGATTTGGGCATCGATTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCTGAGTCAGATGCAAAACCAATGTGCGTTGAAGAAGAAATGGTTGCTAATAACGACTATAGAGATTTTAGAACAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGAGCGTGAACATGAATTTCCCTCAAATACATTCACTGACCTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTACAGTCCCAGTGGTGACTGACAACACGAAATTGTATAAGGGAATGATCTGTGAAGACAAAGAAACACTACAAGATATGGTCAAGTGTTTTGCTATTAAGAGTCACGCACCATATGAAATAGTGGAGTCAACGCCGACAAAGTGGGTCATCCGATGTAAGAAGTCGGATGAAGGTTGCAGATGGAGACTTCGTGCAATACTGAAGAAATCTCATGGTTTATTTGAGATCACACAATTGTCTGACCAACATACATGCTTTTACTCAGAACTTAGTCAAAGTCATGTGCAGTTGGATTCTTCAATGATTGCACGAGAGTTTTGTGAATCCGTTCGAGAAAAACCATCGATCAGTGTACCACAGCTGCAATCCATGATTAAGGAAAATTTCGGCTACCATGTTCCTTACCATAGAGCTTGGGATGGGAAAAGAAAAGCGGTAGCCAAAGTGTTTGGCGATTGGGATGAGTCGTACAAACTACTACCTAGATGGTTGTACATGGTTAAACATACAAATCCTGGAACAGTGGTTGAATGGAGGGTACAAAGCACACCTACAGAAGGCCACGTCATACTATCATCTGTATTTTGGGCATTTGGTCCCTGTATAGAAGCTTTTAGTAGATGTATGCCACTTATTCAGATCGATGGTACTCACTTGTACGGCAAGTATAGAGGAAAATTATTAATTGCCACATCTGTCGATTCCAACGCGCATCTTCTACCATTAGCATTTGCCATTGTGGAAGAAGAGTCTGCAGATTCATGGGGATGGTTTTTACAACATCTAAAAAAAATTGTGCCCCACGATGAGGTATGCTTGGTTTCTGATCGACATGCTGGTATCATATCAGTAGTGAATAATCCGGAGAATGGGTGGACAGGACCGAAATGCCATCATAGATTTTGTTTACGCCATATTGTCAGCAATTTCCACAAAAGGTATAAATTCACACCTTTGAAGAACTATGCTTACCGTGCCGGATGTCAATTCCAGATCCGAAAGTTTGAGAAGACAATTCAAGATCTAATGAGACTAAATAGAAGCTGTATAAGTTTTATTGATGACATCCCTATAGAGCAGTGGGCTCAAGCACATGATGGGGGATTTCGGTATGGGTGGATGATGACGAACCTATCAGAGTACATGAACGGAGTCCTCAAAGGAGCTCGGATGTTGCCAATAAATGCTCTAGCTCAAATTACCTTCTTCAAATGTGTGAATTATTTTGAAAAAAGGCGAGAGGAAATAAGAGCTGCATCGGAACGTTGAGATAAACACACCGGGTACGAATCATATTTACAGTAGTTAATAGATTTTTTTTATGTGCATGTTATATTAAGTCCATCAATATTTAGGTACGTACTTCAAAAAAATATTAAAATGGGCTGCGAGATCCAGTAAGCATGAAGTACAATCATATGATCGATTTGAAGGCACTTTTCATGTGAAAACTGGACGTCATGGCTTGAATTCTAAAGAAGGAAATATTCAAATACTACGGTTAAGTGCGTCCGAGCGGTACTGTTCGTGTAACAAGTGGCAAGCCTTCGGTATTCCATGCTCACATTTCATGGCAGTTTGTTCACGGTTTAACATGAACTACGAAGAATTCATTGAGGATTACTACAAAATTTCAACTTACGCTGCATGTTATGCTCCTCAATTTCAACCTGTACCGCATGAAGATTACTGGATCACGCTCACAAGTATGCCTGTCTTACATCCAGATCCACGGTTGTTGAGGAAACCAGGCAGACCAAAGAGTTCACGATATCACAACGAGATGGATTGGGCAGAACCAAGTGCTCAACAACGATGCTCGTTTTGTGGTTAACTTGGTCACAACCGACGCAAATGTACTTTGTTATTGAGACAGGCACCTGATAGTTAGAGAAGTTTTGTGTACTCAATATGCAGTGTATTTGTCATTGTTACTTATAAAATAGAAACATTTTAGACCGTTTGTTACCGTAAGTTGTAAATAATTTATATTTAATTAAAATTGACATATTTTTTTCTTATGTTCTTAGTGCTACAATCATCAATGTTTAATTAATAAACAAATAAATTATTTTTATGTAGATAATGACATTAAACCCAGGACCAATCGATCCTGAAGTTTTTATGATCAGAACATTCACCAATCAGCAGTCGTTTGGGACGATCGAACTACACCCGAGATGAATTGTAGACGACGTGAGGCGATTGTTTATCGCACTATCCCACTTCATCGTAGCATACTTCCACTACTTCATGCTTCAGGATTTTATGGGATTGACAGGTTGGGGTTCATTCAGCTAGATTGGCATCTCATCACTGCACTTGTTGAGAGATGGAGACCAGAGACGCATACATTTCACATGCCGACTGGAGAGTGCACAGTGACATTACAGGATGTGGAAGTTTTGATGGGATTACCTGTTGATGGCGAGTCTGTTACTGGTCAGAGCCATGATGATTGGTTGCATCTTTGCCAAGTGTTGCTCGGTGTGACCCCACCTGCTGAACAAATCAGGGGTTCGAGATTATGTTTAACATGGCTAGGGGTAGAATTTCCTGGATTGGCTGATGATGCTAACGAGAAAACTATCGCAAGATATGCACGGGCATATATTTTGCAGTTGATGGGTGGAAGTATGTTTGCAAATAAGTCAACTCGTTACGTGCACCTAATGTTCTTGCCGTTTTTAGCTAATCTGCACGAAACGGGACGATATTCTTGGGGTGGAGCCTGTTTAGCATTGTTGTATAGACAGTTATGCAATGCAGCAAAACAAGGCATTCGTGATATTGCTGGACCATTAATACTGTTACAGCTATGGGCTTGGGAACGATTCCCAATAGTGGCTCCACAACTTCTGCACGTTAATGATCATCAACTACACGGACGAGCTTATGGTTCGAGATATGTTCTTTTAATTTAGTTTAGATTAACCATAATTTTTTATACGTAATAGATTTATAATATGAAATATTGGTTATTGGTTGAACAATACAGATGGCGAAATCAATTTTGTGTCACCAGGTCGGCTACACATGTAGTCTCTCAATATAGGTACATGTTTGATCTTCAACCTGATCAGGTACGTTGTGCTGAATTTGAATTTTAAGTTACATATTATCTGTTTAATATTAGTTGTTCATATAATATAATATATTGTGTTTAAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCCGAATTTCTGTACGAATGGTCACGACATATGGCAGACGGTTAGTCCTCTCATATGTTTTCACATCGGTGAGTGGCATCATCCTGACAGAACACTCAGACAGTTTGGTATTATATAAGATGTTCCAGTTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGAACGGCTGATTGGTCCAATAGAGTTGCTCATTTGGTGATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGGTACGTATTTAAATATTGTCTAATTGTTTTTAATACAAATTAATTTTTAATAGTTTCTAATTAATTTTAATATTTCACAGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAGTAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCAGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACATGA

mRNA sequence

ATGGCAGACAAATACGTGTCATTTATGTTGTTTACAAATGGCAATATGATTGACGGTGTCGATGGGGTTGATTATGATCAACCTCCATGTGGGAATTTTAGTATAAATGCAAACAGTGGGATTGTTTATGAACAATTCATCCAAATGGTGGGGTTATCACTTGGTGTAGATATAAGTTCGAACCAAATAGAGATAATATATAGACACCCTAATTTAACCCCATCTGGATCCGTAAGCTTTATACCATTCCCTATTTCGAATGAACAAGCAATGAACACCATGTTTTCAATTGCACTACCGTTTCCGAACATGATGCATTTGTACGTGACTGTGAGTAAGATAGATTTGGGCATCGATTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCTGAGTCAGATGCAAAACCAATGTGCGTTGAAGAAGAAATGGTTGCTAATAACGACTATAGAGATTTTAGAACAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGAGCGTGAACATGAATTTCCCTCAAATACATTCACTGACCTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTACAGTCCCAGTGGTGACTGACAACACGAAATTGTATAAGGGAATGATCTGTGAAGACAAAGAAACACTACAAGATATGGTCAAATCCACGGTTGTTGAGGAAACCAGGCAGACCAAAGAGTTCACGATATCACAACGAGATGGATTGGGCAGAACCAAGTGCTCAACAACGATGCTCATAATGACATTAAACCCAGGACCAATCGATCCTGAAGTTTTTATGATCAGAACATTCACCAATCAGCAGTCATGGCGAAATCAATTTTGTGTCACCAGGTCGGCTACACATGTAGTCTCTCAATATAGGTACATGTTTGATCTTCAACCTGATCAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCCGAATTTCTGTACGAATGGTCACGACATATGGCAGACGGTTAGTCCTCTCATATGTTTTCACATCGATGTTCCAGTTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGAACGGCTGATTGGTCCAATAGAGTTGCTCATTTGGTGATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAGTAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCAGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACATGA

Coding sequence (CDS)

ATGGCAGACAAATACGTGTCATTTATGTTGTTTACAAATGGCAATATGATTGACGGTGTCGATGGGGTTGATTATGATCAACCTCCATGTGGGAATTTTAGTATAAATGCAAACAGTGGGATTGTTTATGAACAATTCATCCAAATGGTGGGGTTATCACTTGGTGTAGATATAAGTTCGAACCAAATAGAGATAATATATAGACACCCTAATTTAACCCCATCTGGATCCGTAAGCTTTATACCATTCCCTATTTCGAATGAACAAGCAATGAACACCATGTTTTCAATTGCACTACCGTTTCCGAACATGATGCATTTGTACGTGACTGTGAGTAAGATAGATTTGGGCATCGATTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCTGAGTCAGATGCAAAACCAATGTGCGTTGAAGAAGAAATGGTTGCTAATAACGACTATAGAGATTTTAGAACAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGAGCGTGAACATGAATTTCCCTCAAATACATTCACTGACCTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTACAGTCCCAGTGGTGACTGACAACACGAAATTGTATAAGGGAATGATCTGTGAAGACAAAGAAACACTACAAGATATGGTCAAATCCACGGTTGTTGAGGAAACCAGGCAGACCAAAGAGTTCACGATATCACAACGAGATGGATTGGGCAGAACCAAGTGCTCAACAACGATGCTCATAATGACATTAAACCCAGGACCAATCGATCCTGAAGTTTTTATGATCAGAACATTCACCAATCAGCAGTCATGGCGAAATCAATTTTGTGTCACCAGGTCGGCTACACATGTAGTCTCTCAATATAGGTACATGTTTGATCTTCAACCTGATCAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCCGAATTTCTGTACGAATGGTCACGACATATGGCAGACGGTTAGTCCTCTCATATGTTTTCACATCGATGTTCCAGTTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGAACGGCTGATTGGTCCAATAGAGTTGCTCATTTGGTGATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAGTAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCAGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACATGA

Protein sequence

MADKYVSFMLFTNGNMIDGVDGVDYDQPPCGNFSINANSGIVYEQFIQMVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVANNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKLYKGMICEDKETLQDMVKSTVVEETRQTKEFTISQRDGLGRTKCSTTMLIMTLNPGPIDPEVFMIRTFTNQQSWRNQFCVTRSATHVVSQYRYMFDLQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLICFHIDVPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADVSPMMMMPAFGT
Homology
BLAST of PI0016234 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-15
Identity = 55/166 (33.13%), Postives = 75/166 (45.18%), Query Frame = 0

Query: 283 WRNQFCVTRSATHVVSQYRYMFDLQPD-QIIWEPYKA-VMDSLPNFCTNGHDIWQTVSPL 342
           WR       +    +  YR  FD Q D Q+IW+PY   ++  +P  C +G +IW+TV+PL
Sbjct: 290 WRASLSHKENPRGGLDFYRDQFDQQKDEQVIWQPYTPDLLAKIPLICVSGENIWRTVAPL 349

Query: 343 ICF-----------------HIDVPVDCNTEPLLHNIDLR---TADWSNRVAHLVMRWLN 402
           ICF                 H  +P  C+ E  LH ID R     DWS R +  +  W  
Sbjct: 350 ICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEA 409

Query: 403 RRRFIATG---CSFGQFDVDVTPEYINWYRNITRLYIT-----RPG 419
           R   + +G   CS     +D    Y+ WYR ITR  I+     RPG
Sbjct: 410 RVSSVVSGEPECS----PMDYNDPYMEWYRRITRRIISPMNERRPG 451

BLAST of PI0016234 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 2.3e-112
Identity = 353/1153 (30.62%), Postives = 400/1153 (34.69%), Query Frame = 0

Query: 49   MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMMHLY 108
            MVGLSLGVD+SS+QIEIIYRHPNLT SG+V F+PFPISNEQ MNTMFSIALPFPNM+HLY
Sbjct: 1    MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 109  VTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVANNDYRDFRTETDDEFEEM 168
            VTVS +D  I+LNVE R VEEYVDV+PESDA P+C EEEMVA N+Y +FRTETDDEFEEM
Sbjct: 61   VTVSMVDTAINLNVEPRYVEEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDEFEEM 120

Query: 169  EFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKLYKGMICEDKETLQDMVKS 228
            +FD  E+E PSNTFTDLDMNAVD ++EHDPI VP+VTDNTKLY GMICE+K+ LQ MVK 
Sbjct: 121  DFDGCEYEVPSNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQHMVKC 180

Query: 229  ---------TVVEET--------------------------------------------- 288
                      VVE T                                             
Sbjct: 181  FAIKSHAPYEVVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSE 240

Query: 289  --------------RQTKEFT--------------------------------------- 348
                          R+  EF                                        
Sbjct: 241  LSQSHVQLDSSMLAREFFEFVREKPSISVASLQSMIKEKFGYHVSYRRAWDGKKKSVAKV 300

Query: 349  ------------------------------------------------------------ 408
                                                                        
Sbjct: 301  FGDWDESYKLLPRWLYMVKHTNPGTLVEWRVQATPIEGHVILSSVFWAFGPCIEAFSRSF 360

Query: 409  -----------------------------ISQR--------------------------- 468
                                         +S R                           
Sbjct: 361  VVVEEESADSWGWFLRHLKQIVTHDEICLLSDRHAGIISAVNNPDNGWTGANCHHRFCLR 420

Query: 469  ------------------------------------DGLGRTKCSTTML----------- 516
                                                DG  R    TT L           
Sbjct: 421  HVIRKFDKAIQDLMRINSRCMSFFYDIPIEKWTQAHDGGFRYGWMTTNLSECMNGVFKGA 480

BLAST of PI0016234 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 9.6e-103
Identity = 185/251 (73.71%), Postives = 208/251 (82.87%), Query Frame = 0

Query: 283 WRNQFCVTRSATHVVSQYRYMFD-LQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLI 342
           WR+QFCVTRSATHVVSQYRYMFD LQP QI+WEPYK V+DSLP+FCTNGH+IW+T+SPLI
Sbjct: 255 WRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLI 314

Query: 343 CFHID-----------------VPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRF 402
           CF+I                  VP DCNTEPLLHNIDLRTADWS+RVAHLVMRW NRRRF
Sbjct: 315 CFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRF 374

Query: 403 IATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDI 462
            ATG    QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+I
Sbjct: 375 TATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVADDPQQVLNI 434

Query: 463 CNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADV 516
           CN NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+Q  +EVPP+ QTQS    V
Sbjct: 435 CNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYV 494

BLAST of PI0016234 vs. ExPASy TrEMBL
Match: A0A5D3CIZ8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00630 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 9.6e-103
Identity = 270/716 (37.71%), Postives = 323/716 (45.11%), Query Frame = 0

Query: 91  MNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVA 150
           MNTMFSIALPFPNM+HLYVTVS +DL I+LN E + VEEYVDVD E DA P+C EEEMVA
Sbjct: 1   MNTMFSIALPFPNMVHLYVTVSMVDLAINLNAEPKYVEEYVDVDLELDAPPVCHEEEMVA 60

Query: 151 NNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKL 210
            N+Y +FRTETDDEFEE++FD  E+E PSNTFTDLDM+ VD ++E DPI V +VTDNTKL
Sbjct: 61  TNEYTEFRTETDDEFEEIDFDGCEYEVPSNTFTDLDMDTVDGIQEDDPIIVSMVTDNTKL 120

Query: 211 YKGMICEDKETLQDMVKS---------TVVEET--------------------------- 270
           Y GMICE+KE LQ MVK           VVE T                           
Sbjct: 121 YTGMICENKEMLQHMVKCFAIKSHAPYEVVESTSTKWVIRWLWMVKKKAVAKVFGDWDES 180

Query: 271 -----------RQTKEFTI----------------------------------------- 330
                      + T   T+                                         
Sbjct: 181 YKLLPRWLYMVKHTNPGTLVEWRVQATPIEGHVILSSVFWAFGPCIKAFSRCRPLIQIDG 240

Query: 331 ------------------------SQRDGLGRTK-------------------------- 390
                                    + +G+   K                          
Sbjct: 241 THLYALEKILKWSARSSKHEVQSYHRSEGIFHVKTGRHELNSKGGNIQMLKLNASERYCS 300

Query: 391 ----------CSTTMLIMTLNPGPIDPEVFMIRT-------------------------- 450
                     CS  M I   +   ++  V +I T                          
Sbjct: 301 CNKWQAFGIPCSHFMAIHRCSENQVNQRVHVITTRWIGQNKVLNNDVHYVVNLIITDGGF 360

Query: 451 ----------------FTNQQSWR------------------------------------ 510
                               + WR                                    
Sbjct: 361 YGLARLGFVQLDWHLIIALLERWRPEMHTFHMSVGECTITLQDVKVLVGLPADGEPVTDQ 420

Query: 511 -------------------------------------------NQFCVTRSATHVVSQY- 516
                                                      ++  +TR A   + Q  
Sbjct: 421 MHDVWLHVCQKLLGVIPPLEQIRGQRLSLTWLGVEFHELANDADEETITRYARAYILQLM 480

BLAST of PI0016234 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 8.2e-102
Identity = 184/251 (73.31%), Postives = 208/251 (82.87%), Query Frame = 0

Query: 283 WRNQFCVTRSATHVVSQYRYMFD-LQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLI 342
           WR+QFCVTR ATHVVSQYRYMFD LQP QI+WEPYK V+DSLP+FCTNGH+IW+T+SPLI
Sbjct: 142 WRDQFCVTRLATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLI 201

Query: 343 CFHID-----------------VPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRF 402
           CF+I                  VP DCNTEPLLHNIDLRTADWS+RVAHLVMRW NRRRF
Sbjct: 202 CFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRF 261

Query: 403 IATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDI 462
            ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+I
Sbjct: 262 TATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNI 321

Query: 463 CNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADV 516
           CN NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+Q  +EVPP+ QTQS    V
Sbjct: 322 CNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYV 381

BLAST of PI0016234 vs. ExPASy TrEMBL
Match: A0A5D3BR52 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001490 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 4.5e-92
Identity = 205/425 (48.24%), Postives = 236/425 (55.53%), Query Frame = 0

Query: 91  MNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVA 150
           MNTMFS+ALPFPNM+HLYVTVS +D  I+LNVE R VEEYVDV+PESDA P+C EEEMVA
Sbjct: 1   MNTMFSVALPFPNMVHLYVTVSMVDTVINLNVEPRYVEEYVDVEPESDALPVCHEEEMVA 60

Query: 151 NNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKL 210
            N+Y +FRTETDDEFEEM+FD  E+E PSNTFTDLDMNAVD+++EHDPI VP+VTDNTKL
Sbjct: 61  TNEYTEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDAIQEHDPIIVPMVTDNTKL 120

Query: 211 YKGMICEDKETLQDMVKSTVVEETRQTKEFTISQRDGLGRTKCSTTMLIMTLNPGPIDPE 270
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 271 VFMIRTFTNQQSWRNQFCVTRSATHVVSQYRYMFDLQPDQIIWEPYKAVMDSLPNFCTNG 330
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 331 HDIWQTVSPLICFHIDVPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRFIATGCS 390
                                            TADWS+RVAHLVMRW NRRRF ATG  
Sbjct: 241 ---------------------------------TADWSDRVAHLVMRWHNRRRFTATGPP 272

Query: 391 FGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNSNER 450
             QFD+DVT EY +WY+NI++LYIT+ GAA+ HLRSNN RLR+VADDPQQVL+ICN NE+
Sbjct: 301 IEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQ 272

Query: 451 YMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADVSPMMMM 510
           YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+Q  +EVPP+ +TQS    VSP+MMM
Sbjct: 361 YMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMM 272

Query: 511 PAFGT 516
           P F T
Sbjct: 421 PTFET 272

BLAST of PI0016234 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 416.0 bits (1068), Expect = 4.7e-112
Identity = 353/1153 (30.62%), Postives = 400/1153 (34.69%), Query Frame = 0

Query: 49   MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMMHLY 108
            MVGLSLGVD+SS+QIEIIYRHPNLT SG+V F+PFPISNEQ MNTMFSIALPFPNM+HLY
Sbjct: 1    MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 109  VTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVANNDYRDFRTETDDEFEEM 168
            VTVS +D  I+LNVE R VEEYVDV+PESDA P+C EEEMVA N+Y +FRTETDDEFEEM
Sbjct: 61   VTVSMVDTAINLNVEPRYVEEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDEFEEM 120

Query: 169  EFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKLYKGMICEDKETLQDMVKS 228
            +FD  E+E PSNTFTDLDMNAVD ++EHDPI VP+VTDNTKLY GMICE+K+ LQ MVK 
Sbjct: 121  DFDGCEYEVPSNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQHMVKC 180

Query: 229  ---------TVVEET--------------------------------------------- 288
                      VVE T                                             
Sbjct: 181  FAIKSHAPYEVVESTPTKWVIRCKKSNEGCKWRLRAIMKKSHGLFEITKLSDQHTCFYSE 240

Query: 289  --------------RQTKEFT--------------------------------------- 348
                          R+  EF                                        
Sbjct: 241  LSQSHVQLDSSMLAREFFEFVREKPSISVASLQSMIKEKFGYHVSYRRAWDGKKKSVAKV 300

Query: 349  ------------------------------------------------------------ 408
                                                                        
Sbjct: 301  FGDWDESYKLLPRWLYMVKHTNPGTLVEWRVQATPIEGHVILSSVFWAFGPCIEAFSRSF 360

Query: 409  -----------------------------ISQR--------------------------- 468
                                         +S R                           
Sbjct: 361  VVVEEESADSWGWFLRHLKQIVTHDEICLLSDRHAGIISAVNNPDNGWTGANCHHRFCLR 420

Query: 469  ------------------------------------DGLGRTKCSTTML----------- 516
                                                DG  R    TT L           
Sbjct: 421  HVIRKFDKAIQDLMRINSRCMSFFYDIPIEKWTQAHDGGFRYGWMTTNLSECMNGVFKGA 480

BLAST of PI0016234 vs. NCBI nr
Match: TYK11154.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 384.0 bits (985), Expect = 2.0e-102
Identity = 270/716 (37.71%), Postives = 323/716 (45.11%), Query Frame = 0

Query: 91  MNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVA 150
           MNTMFSIALPFPNM+HLYVTVS +DL I+LN E + VEEYVDVD E DA P+C EEEMVA
Sbjct: 1   MNTMFSIALPFPNMVHLYVTVSMVDLAINLNAEPKYVEEYVDVDLELDAPPVCHEEEMVA 60

Query: 151 NNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKL 210
            N+Y +FRTETDDEFEE++FD  E+E PSNTFTDLDM+ VD ++E DPI V +VTDNTKL
Sbjct: 61  TNEYTEFRTETDDEFEEIDFDGCEYEVPSNTFTDLDMDTVDGIQEDDPIIVSMVTDNTKL 120

Query: 211 YKGMICEDKETLQDMVKS---------TVVEET--------------------------- 270
           Y GMICE+KE LQ MVK           VVE T                           
Sbjct: 121 YTGMICENKEMLQHMVKCFAIKSHAPYEVVESTSTKWVIRWLWMVKKKAVAKVFGDWDES 180

Query: 271 -----------RQTKEFTI----------------------------------------- 330
                      + T   T+                                         
Sbjct: 181 YKLLPRWLYMVKHTNPGTLVEWRVQATPIEGHVILSSVFWAFGPCIKAFSRCRPLIQIDG 240

Query: 331 ------------------------SQRDGLGRTK-------------------------- 390
                                    + +G+   K                          
Sbjct: 241 THLYALEKILKWSARSSKHEVQSYHRSEGIFHVKTGRHELNSKGGNIQMLKLNASERYCS 300

Query: 391 ----------CSTTMLIMTLNPGPIDPEVFMIRT-------------------------- 450
                     CS  M I   +   ++  V +I T                          
Sbjct: 301 CNKWQAFGIPCSHFMAIHRCSENQVNQRVHVITTRWIGQNKVLNNDVHYVVNLIITDGGF 360

Query: 451 ----------------FTNQQSWR------------------------------------ 510
                               + WR                                    
Sbjct: 361 YGLARLGFVQLDWHLIIALLERWRPEMHTFHMSVGECTITLQDVKVLVGLPADGEPVTDQ 420

Query: 511 -------------------------------------------NQFCVTRSATHVVSQY- 516
                                                      ++  +TR A   + Q  
Sbjct: 421 MHDVWLHVCQKLLGVIPPLEQIRGQRLSLTWLGVEFHELANDADEETITRYARAYILQLM 480

BLAST of PI0016234 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 384.0 bits (985), Expect = 2.0e-102
Identity = 185/251 (73.71%), Postives = 208/251 (82.87%), Query Frame = 0

Query: 283 WRNQFCVTRSATHVVSQYRYMFD-LQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLI 342
           WR+QFCVTRSATHVVSQYRYMFD LQP QI+WEPYK V+DSLP+FCTNGH+IW+T+SPLI
Sbjct: 255 WRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLI 314

Query: 343 CFHID-----------------VPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRF 402
           CF+I                  VP DCNTEPLLHNIDLRTADWS+RVAHLVMRW NRRRF
Sbjct: 315 CFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRF 374

Query: 403 IATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDI 462
            ATG    QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+I
Sbjct: 375 TATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVADDPQQVLNI 434

Query: 463 CNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADV 516
           CN NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+Q  +EVPP+ QTQS    V
Sbjct: 435 CNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYV 494

BLAST of PI0016234 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 380.9 bits (977), Expect = 1.7e-101
Identity = 184/251 (73.31%), Postives = 208/251 (82.87%), Query Frame = 0

Query: 283 WRNQFCVTRSATHVVSQYRYMFD-LQPDQIIWEPYKAVMDSLPNFCTNGHDIWQTVSPLI 342
           WR+QFCVTR ATHVVSQYRYMFD LQP QI+WEPYK V+DSLP+FCTNGH+IW+T+SPLI
Sbjct: 142 WRDQFCVTRLATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLI 201

Query: 343 CFHID-----------------VPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRF 402
           CF+I                  VP DCNTEPLLHNIDLRTADWS+RVAHLVMRW NRRRF
Sbjct: 202 CFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRF 261

Query: 403 IATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDI 462
            ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+I
Sbjct: 262 TATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNI 321

Query: 463 CNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADV 516
           CN NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+Q  +EVPP+ QTQS    V
Sbjct: 322 CNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYV 381

BLAST of PI0016234 vs. NCBI nr
Match: TYK01570.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 348.6 bits (893), Expect = 9.3e-92
Identity = 205/425 (48.24%), Postives = 236/425 (55.53%), Query Frame = 0

Query: 91  MNTMFSIALPFPNMMHLYVTVSKIDLGIDLNVESRPVEEYVDVDPESDAKPMCVEEEMVA 150
           MNTMFS+ALPFPNM+HLYVTVS +D  I+LNVE R VEEYVDV+PESDA P+C EEEMVA
Sbjct: 1   MNTMFSVALPFPNMVHLYVTVSMVDTVINLNVEPRYVEEYVDVEPESDALPVCHEEEMVA 60

Query: 151 NNDYRDFRTETDDEFEEMEFDEREHEFPSNTFTDLDMNAVDSVREHDPITVPVVTDNTKL 210
            N+Y +FRTETDDEFEEM+FD  E+E PSNTFTDLDMNAVD+++EHDPI VP+VTDNTKL
Sbjct: 61  TNEYTEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDAIQEHDPIIVPMVTDNTKL 120

Query: 211 YKGMICEDKETLQDMVKSTVVEETRQTKEFTISQRDGLGRTKCSTTMLIMTLNPGPIDPE 270
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 271 VFMIRTFTNQQSWRNQFCVTRSATHVVSQYRYMFDLQPDQIIWEPYKAVMDSLPNFCTNG 330
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 331 HDIWQTVSPLICFHIDVPVDCNTEPLLHNIDLRTADWSNRVAHLVMRWLNRRRFIATGCS 390
                                            TADWS+RVAHLVMRW NRRRF ATG  
Sbjct: 241 ---------------------------------TADWSDRVAHLVMRWHNRRRFTATGPP 272

Query: 391 FGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNSNER 450
             QFD+DVT EY +WY+NI++LYIT+ GAA+ HLRSNN RLR+VADDPQQVL+ICN NE+
Sbjct: 301 IEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQ 272

Query: 451 YMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVEQQVQEVPPVRQTQSRTADVSPMMMM 510
           YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+Q  +EVPP+ +TQS    VSP+MMM
Sbjct: 361 YMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMM 272

Query: 511 PAFGT 516
           P F T
Sbjct: 421 PTFET 272

BLAST of PI0016234 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 85.5 bits (210), Expect = 1.4e-16
Identity = 55/166 (33.13%), Postives = 75/166 (45.18%), Query Frame = 0

Query: 283 WRNQFCVTRSATHVVSQYRYMFDLQPD-QIIWEPYKA-VMDSLPNFCTNGHDIWQTVSPL 342
           WR       +    +  YR  FD Q D Q+IW+PY   ++  +P  C +G +IW+TV+PL
Sbjct: 290 WRASLSHKENPRGGLDFYRDQFDQQKDEQVIWQPYTPDLLAKIPLICVSGENIWRTVAPL 349

Query: 343 ICF-----------------HIDVPVDCNTEPLLHNIDLR---TADWSNRVAHLVMRWLN 402
           ICF                 H  +P  C+ E  LH ID R     DWS R +  +  W  
Sbjct: 350 ICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEA 409

Query: 403 RRRFIATG---CSFGQFDVDVTPEYINWYRNITRLYIT-----RPG 419
           R   + +G   CS     +D    Y+ WYR ITR  I+     RPG
Sbjct: 410 RVSSVVSGEPECS----PMDYNDPYMEWYRRITRRIISPMNERRPG 451

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LNG51.9e-1533.13Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana... [more]
Match NameE-valueIdentityDescription
A0A5D3BAB02.3e-11230.62Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7VIP69.6e-10373.71Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5D3CIZ89.6e-10337.71Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5A7T5988.2e-10273.31Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3BR524.5e-9248.24Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
Match NameE-valueIdentityDescription
TYJ95836.14.7e-11230.62serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK11154.12.0e-10237.71mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
KAA0067080.12.0e-10273.71mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
KAA0036767.11.7e-10173.31serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK01570.19.3e-9248.24mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
Match NameE-valueIdentityDescription
AT1G48120.11.4e-1633.13hydrolases;protein serine/threonine phosphatases [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016234.1PI0016234.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010073 meristem maintenance