Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAACGAAGGTGATTAAACAGGAGATGAATGTGGATGTGATTATTTTGAATGACGATCAACATAAGGATGTTGTCGAGGTAATTAGTTAACAATGTTATATTTGATGCATGGGTTTCTATTTGCATTATAAAGTTTAGCATTGTTGGATTTATGACTTTCTTAGGTCCCTAATGAAAAAGAAGTTGTTTGTGAGTTCAATATCAACATGTCACTACCTTTGAAAGCAATACTTAGATTTGTTGAAAAGGTAACAGAAAAAGATTATGGCATTCGTTACCAACTACCAATTTCATTGTTTGGTATCGGTAGAAAGACTTGTGTTTTGCGAGAAGATATTGTTGACTTCTGTAACATGCGAGAAGTAAAGACTTTGACATTAGTAGTATATATGGTGTAAGTACTTATTCATCTACTCTAGTCCTTTTATATAAAATACTTGTTTATTGACTTTTTCATCTCTTTTAGGTATTTGCATTCACAAGATGTTTCAAATTACATCTTTGTTGACCCATCCTTTATATCGGTTGGACACAACATCCAGGAAGTTAGAGTTCGCAACCTATGCAGTATATTAATGGCTTCACAACAAAACCAACTCGTTACGACTCATTTTAATCAAGGGTAA
mRNA sequence
ATGACAACGAAGGTGATTAAACAGGAGATGAATGTGGATGTGATTATTTTGAATGACGATCAACATAAGGATGTTGTCGAGGTCCCTAATGAAAAAGAAGTTGTTTGTGAGTTCAATATCAACATGTCACTACCTTTGAAAGCAATACTTAGATTTGTTGAAAAGGTAACAGAAAAAGATTATGGCATTCGTTACCAACTACCAATTTCATTGTTTGGTATCGGTAGAAAGACTTGTGTTTTGCGAGAAGATATTGTTGACTTCTGTAACATGCGAGAAGTAAAGACTTTGACATTAGTAGTATATATGGTGTATTTGCATTCACAAGATGTTTCAAATTACATCTTTGTTGACCCATCCTTTATATCGGTTGGACACAACATCCAGGAAGTTAGAGTTCGCAACCTATGCAGTATATTAATGGCTTCACAACAAAACCAACTCGTTACGACTCATTTTAATCAAGGGTAA
Coding sequence (CDS)
ATGACAACGAAGGTGATTAAACAGGAGATGAATGTGGATGTGATTATTTTGAATGACGATCAACATAAGGATGTTGTCGAGGTCCCTAATGAAAAAGAAGTTGTTTGTGAGTTCAATATCAACATGTCACTACCTTTGAAAGCAATACTTAGATTTGTTGAAAAGGTAACAGAAAAAGATTATGGCATTCGTTACCAACTACCAATTTCATTGTTTGGTATCGGTAGAAAGACTTGTGTTTTGCGAGAAGATATTGTTGACTTCTGTAACATGCGAGAAGTAAAGACTTTGACATTAGTAGTATATATGGTGTATTTGCATTCACAAGATGTTTCAAATTACATCTTTGTTGACCCATCCTTTATATCGGTTGGACACAACATCCAGGAAGTTAGAGTTCGCAACCTATGCAGTATATTAATGGCTTCACAACAAAACCAACTCGTTACGACTCATTTTAATCAAGGGTAA
Protein sequence
MTTKVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKDYGIRYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQDVSNYIFVDPSFISVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG
Homology
BLAST of PI0016043 vs. ExPASy TrEMBL
Match:
A0A5A7TUX7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE=3 SV=1)
HSP 1 Score: 227.6 bits (579), Expect = 3.5e-56
Identity = 119/154 (77.27%), Postives = 128/154 (83.12%), Query Frame = 0
Query: 4 KVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKDYGI 63
+V+K E+NVDVIILND Q KD +EV NEKEVVCEFN+ MSLPLK ILRF E V +KD GI
Sbjct: 748 EVVKDEVNVDVIILNDLQ-KDAIEVRNEKEVVCEFNMKMSLPLKTILRFAENVMDKDSGI 807
Query: 64 RYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDPSFI 123
RYQLP SLFGIGRKTCVLREDI+DFCNMREVKTLT V Y VYLHSQD +SNYIFV PS I
Sbjct: 808 RYQLPFSLFGIGRKTCVLREDIIDFCNMREVKTLTFVAYTVYLHSQDKLSNYIFVGPSLI 867
Query: 124 SVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG 157
SVGHN QEVR RNLCS LMAS+ NQLV FN G
Sbjct: 868 SVGHNTQEVRARNLCSRLMASKSNQLVLAPFNPG 900
BLAST of PI0016043 vs. ExPASy TrEMBL
Match:
A0A5D3BVS7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE=4 SV=1)
HSP 1 Score: 227.6 bits (579), Expect = 3.5e-56
Identity = 119/154 (77.27%), Postives = 128/154 (83.12%), Query Frame = 0
Query: 4 KVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKDYGI 63
+V+K E+NVDVIILND Q KD +EV NEKEVVCEFN+ MSLPLK ILRF E V +KD GI
Sbjct: 748 EVVKDEVNVDVIILNDLQ-KDAIEVRNEKEVVCEFNMKMSLPLKTILRFAENVMDKDSGI 807
Query: 64 RYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDPSFI 123
RYQLP SLFGIGRKTCVLREDI+DFCNMREVKTLT V Y VYLHSQD +SNYIFV PS I
Sbjct: 808 RYQLPFSLFGIGRKTCVLREDIIDFCNMREVKTLTFVAYTVYLHSQDKLSNYIFVGPSLI 867
Query: 124 SVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG 157
SVGHN QEVR RNLCS LMAS+ NQLV FN G
Sbjct: 868 SVGHNTQEVRARNLCSRLMASKSNQLVLAPFNPG 900
BLAST of PI0016043 vs. ExPASy TrEMBL
Match:
A0A5A7U2V5 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00040 PE=3 SV=1)
HSP 1 Score: 223.4 bits (568), Expect = 6.6e-55
Identity = 118/152 (77.63%), Postives = 127/152 (83.55%), Query Frame = 0
Query: 4 KVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKDYGI 63
+V+K+E+NVDVIILND Q +D +EV NEKEVVCE NI MSLPLK ILRF EKVT KD GI
Sbjct: 287 EVVKEEVNVDVIILNDLQ-EDAIEVRNEKEVVCESNIKMSLPLKIILRFAEKVTNKDSGI 346
Query: 64 RYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDPSFI 123
RYQLP SLFGI RK CVLREDI+DFCNMREVKTLTLV YM Y HSQD +SNYIFVDPS I
Sbjct: 347 RYQLPFSLFGIDRKMCVLREDIIDFCNMREVKTLTLVAYMAYWHSQDELSNYIFVDPSLI 406
Query: 124 SVGHNIQEVRVRNLCSILMASQQNQLVTTHFN 155
SVGHN QEVR RNLCS LMAS+ NQLV FN
Sbjct: 407 SVGHNTQEVRARNLCSRLMASKPNQLVLAPFN 437
BLAST of PI0016043 vs. ExPASy TrEMBL
Match:
A0A5A7U6T9 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3445G00180 PE=3 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 115/157 (73.25%), Postives = 129/157 (82.17%), Query Frame = 0
Query: 1 MTTKVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKD 60
+TTKV+K+E+NVDVIILN DQ +D +EV NEKE+VC+ NI M LPLK ILRF EKV +KD
Sbjct: 3 VTTKVVKEEVNVDVIILN-DQQEDAIEVCNEKEIVCDSNIKMPLPLKTILRFAEKVMDKD 62
Query: 61 YGIRYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDP 120
GIRYQLP SLFGIGRKTCVLREDI+D CN+ E KTLTLV YMVYLHSQD +SNYIFVDP
Sbjct: 63 SGIRYQLPFSLFGIGRKTCVLREDIIDICNIGEAKTLTLVAYMVYLHSQDELSNYIFVDP 122
Query: 121 SFISVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG 157
I+V HN QEVR RNLCS LMAS+ NQLV FN G
Sbjct: 123 FLINVEHNTQEVRARNLCSRLMASKSNQLVLAPFNPG 158
BLAST of PI0016043 vs. ExPASy TrEMBL
Match:
A0A5D3BHZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00150 PE=4 SV=1)
HSP 1 Score: 221.5 bits (563), Expect = 2.5e-54
Identity = 117/157 (74.52%), Postives = 131/157 (83.44%), Query Frame = 0
Query: 1 MTTKVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKD 60
+TTKVIK+E+NVDVIIL DDQH+D +EV N+KEVVCE NI+M LPLK I RF+EKV +KD
Sbjct: 3 VTTKVIKEEVNVDVIIL-DDQHEDAIEVLNKKEVVCESNIDMPLPLKTIHRFIEKVMDKD 62
Query: 61 YGIRYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDP 120
IRYQL SLFGIGRKTCVLREDI+DFC MRE+KTLTL+ YM YL SQD VSNYIFVD
Sbjct: 63 SNIRYQLSFSLFGIGRKTCVLREDIIDFCIMREIKTLTLIAYMAYLPSQDHVSNYIFVDL 122
Query: 121 SFISVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG 157
S ISVG N QEVRVRNLCS LMAS+QNQL+ FN G
Sbjct: 123 SLISVGQNTQEVRVRNLCSRLMASKQNQLILAPFNPG 158
BLAST of PI0016043 vs. NCBI nr
Match:
TYK03264.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 227.6 bits (579), Expect = 7.2e-56
Identity = 119/154 (77.27%), Postives = 128/154 (83.12%), Query Frame = 0
Query: 4 KVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKDYGI 63
+V+K E+NVDVIILND Q KD +EV NEKEVVCEFN+ MSLPLK ILRF E V +KD GI
Sbjct: 748 EVVKDEVNVDVIILNDLQ-KDAIEVRNEKEVVCEFNMKMSLPLKTILRFAENVMDKDSGI 807
Query: 64 RYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDPSFI 123
RYQLP SLFGIGRKTCVLREDI+DFCNMREVKTLT V Y VYLHSQD +SNYIFV PS I
Sbjct: 808 RYQLPFSLFGIGRKTCVLREDIIDFCNMREVKTLTFVAYTVYLHSQDKLSNYIFVGPSLI 867
Query: 124 SVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG 157
SVGHN QEVR RNLCS LMAS+ NQLV FN G
Sbjct: 868 SVGHNTQEVRARNLCSRLMASKSNQLVLAPFNPG 900
BLAST of PI0016043 vs. NCBI nr
Match:
KAA0046884.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 227.6 bits (579), Expect = 7.2e-56
Identity = 119/154 (77.27%), Postives = 128/154 (83.12%), Query Frame = 0
Query: 4 KVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKDYGI 63
+V+K E+NVDVIILND Q KD +EV NEKEVVCEFN+ MSLPLK ILRF E V +KD GI
Sbjct: 748 EVVKDEVNVDVIILNDLQ-KDAIEVRNEKEVVCEFNMKMSLPLKTILRFAENVMDKDSGI 807
Query: 64 RYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDPSFI 123
RYQLP SLFGIGRKTCVLREDI+DFCNMREVKTLT V Y VYLHSQD +SNYIFV PS I
Sbjct: 808 RYQLPFSLFGIGRKTCVLREDIIDFCNMREVKTLTFVAYTVYLHSQDKLSNYIFVGPSLI 867
Query: 124 SVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG 157
SVGHN QEVR RNLCS LMAS+ NQLV FN G
Sbjct: 868 SVGHNTQEVRARNLCSRLMASKSNQLVLAPFNPG 900
BLAST of PI0016043 vs. NCBI nr
Match:
KAA0049568.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])
HSP 1 Score: 223.4 bits (568), Expect = 1.4e-54
Identity = 118/152 (77.63%), Postives = 127/152 (83.55%), Query Frame = 0
Query: 4 KVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKDYGI 63
+V+K+E+NVDVIILND Q +D +EV NEKEVVCE NI MSLPLK ILRF EKVT KD GI
Sbjct: 287 EVVKEEVNVDVIILNDLQ-EDAIEVRNEKEVVCESNIKMSLPLKIILRFAEKVTNKDSGI 346
Query: 64 RYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDPSFI 123
RYQLP SLFGI RK CVLREDI+DFCNMREVKTLTLV YM Y HSQD +SNYIFVDPS I
Sbjct: 347 RYQLPFSLFGIDRKMCVLREDIIDFCNMREVKTLTLVAYMAYWHSQDELSNYIFVDPSLI 406
Query: 124 SVGHNIQEVRVRNLCSILMASQQNQLVTTHFN 155
SVGHN QEVR RNLCS LMAS+ NQLV FN
Sbjct: 407 SVGHNTQEVRARNLCSRLMASKPNQLVLAPFN 437
BLAST of PI0016043 vs. NCBI nr
Match:
KAA0051623.1 (uncharacterized protein E6C27_scaffold4784G00030 [Cucumis melo var. makuwa] >TYK27633.1 uncharacterized protein E5676_scaffold3445G00180 [Cucumis melo var. makuwa])
HSP 1 Score: 222.6 bits (566), Expect = 2.3e-54
Identity = 115/157 (73.25%), Postives = 129/157 (82.17%), Query Frame = 0
Query: 1 MTTKVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKD 60
+TTKV+K+E+NVDVIILN DQ +D +EV NEKE+VC+ NI M LPLK ILRF EKV +KD
Sbjct: 3 VTTKVVKEEVNVDVIILN-DQQEDAIEVCNEKEIVCDSNIKMPLPLKTILRFAEKVMDKD 62
Query: 61 YGIRYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDP 120
GIRYQLP SLFGIGRKTCVLREDI+D CN+ E KTLTLV YMVYLHSQD +SNYIFVDP
Sbjct: 63 SGIRYQLPFSLFGIGRKTCVLREDIIDICNIGEAKTLTLVAYMVYLHSQDELSNYIFVDP 122
Query: 121 SFISVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG 157
I+V HN QEVR RNLCS LMAS+ NQLV FN G
Sbjct: 123 FLINVEHNTQEVRARNLCSRLMASKSNQLVLAPFNPG 158
BLAST of PI0016043 vs. NCBI nr
Match:
TYJ98686.1 (uncharacterized protein E5676_scaffold429G00150 [Cucumis melo var. makuwa])
HSP 1 Score: 221.5 bits (563), Expect = 5.2e-54
Identity = 117/157 (74.52%), Postives = 131/157 (83.44%), Query Frame = 0
Query: 1 MTTKVIKQEMNVDVIILNDDQHKDVVEVPNEKEVVCEFNINMSLPLKAILRFVEKVTEKD 60
+TTKVIK+E+NVDVIIL DDQH+D +EV N+KEVVCE NI+M LPLK I RF+EKV +KD
Sbjct: 3 VTTKVIKEEVNVDVIIL-DDQHEDAIEVLNKKEVVCESNIDMPLPLKTIHRFIEKVMDKD 62
Query: 61 YGIRYQLPISLFGIGRKTCVLREDIVDFCNMREVKTLTLVVYMVYLHSQD-VSNYIFVDP 120
IRYQL SLFGIGRKTCVLREDI+DFC MRE+KTLTL+ YM YL SQD VSNYIFVD
Sbjct: 63 SNIRYQLSFSLFGIGRKTCVLREDIIDFCIMREIKTLTLIAYMAYLPSQDHVSNYIFVDL 122
Query: 121 SFISVGHNIQEVRVRNLCSILMASQQNQLVTTHFNQG 157
S ISVG N QEVRVRNLCS LMAS+QNQL+ FN G
Sbjct: 123 SLISVGQNTQEVRVRNLCSRLMASKQNQLILAPFNPG 158
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TUX7 | 3.5e-56 | 77.27 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE... | [more] |
| A0A5D3BVS7 | 3.5e-56 | 77.27 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE... | [more] |
| A0A5A7U2V5 | 6.6e-55 | 77.63 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5A7U6T9 | 1.1e-54 | 73.25 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5D3BHZ0 | 2.5e-54 | 74.52 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK03264.1 | 7.2e-56 | 77.27 | transposase [Cucumis melo var. makuwa] | [more] |
| KAA0046884.1 | 7.2e-56 | 77.27 | transposase [Cucumis melo var. makuwa] | [more] |
| KAA0049568.1 | 1.4e-54 | 77.63 | putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] | [more] |
| KAA0051623.1 | 2.3e-54 | 73.25 | uncharacterized protein E6C27_scaffold4784G00030 [Cucumis melo var. makuwa] >TYK... | [more] |
| TYJ98686.1 | 5.2e-54 | 74.52 | uncharacterized protein E5676_scaffold429G00150 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
