PI0015994 (gene) Melon (PI 482460) v1

Overview
NamePI0015994
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 1202432 .. 1203752 (+)
RNA-Seq ExpressionPI0015994
SyntenyPI0015994
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACTCAAACTACACCATCTAACTTATAAATTGCATTGATTATATAAGTTTTGAGGATTTAATTTTTATTATTTATAAGTTCAATTTCTACGATTGTTGTAGGCTTAAGGGTACAATTTTAACATTTTTAGAAGTTTGGGAGCCCACTTGTTATTATTAGAAGCTTGAGGGTGTAATTGCAACTAACGTCAAACTTTTGGATCATTTTGTAATTTAACTTATTAATAATAGATAAATAAATAAATACATAAACTTTGCTATTGATTTTGGAAAGGTTAAATTACAAAAAAATACCCCTAAATTAAATACCCTTTAGTTTTTGGATGAAAACCGTTAAAGTTTTGTTTAAAAAATGTTCAAAAATTCTCATTGATTCAAAGTTAACCCCAATTCTCTCGCTAACCTAAATAAAAACCCAAATTTTAAGGTAAAACCATATAGTCTTAAATTTATTTGTCTATTAATCTACATTGATAAATCATGGACACAACCAATCTCGTTATTATTGTAATTAACATACCGTTTATGTTAATTATCAAATAAAAAATGTGAGTTTTTTTTTTTTTTGTTTGATTAAAATCTTAATTTGGAACTATGTGAGATTTTTTGGAATTATATGTTTTAGTTAAAGGTTTAAAATATGGATGTTGATGGATATATCAAAGTTTTAATTTTACAAAAATTTTCATTTCGAACAATCTATTATATATATTATATTTATATTAGTGTCATTTTGATTTTTTTTTATTTGTAGATTTTTTAAGGAGGTAATGAAAATGTCGAATCATCCCTTTTATCGTCGAGCTCATGAAAAATATATGGATGAAAATTTAAATTTAAAGATATTTATGAAAAAAATTTTATGGGAATTTTTGAAATTTTTTTAACAAAAAAAAGTTTGAGAGTATTTTTTAAACAATTTTGACACACAGCAGCAAAAATTATGGGATTTTTTATTATTTAGCCTTTTTGGAAACCCGCTGTCACCGGTAACCGCCGGTTTCCATCATTGCTTGGCGGAGATTATTACTTTACCCCACACATTCACGTCTCACTCCTAATCTCTTCTCTATTTCCTGACGCAATTTCATCCTTATCGTCACCTCGCCGTCGTTCGTGGCAATTTCCGATCGCCTATTCTCTTCTCCGGTACGTTTCTTCTTTGCAACCCTTGATTTATTATTTTCCGTGTTTCTTGTTCGGTTGAGAAGTTGTGTTGGGATTCTTAATTTTTTACCTATTTGATGGACGATCCGCTCTTTTCAGTTGTTTTGATCGGTGGCGATCTTTGTTGATGCTTATTGGTACGGCGTGTTAG

mRNA sequence

ATGCCTTTTTGGAAACCCGCTGTCACCGGTAACCGCCGGTTTCCATCATTGCTTGGCGGAGATTATTACTTTACCCCACACATTCACGTCTCACTCCTAATCTCTTCTCTATTTCCTGACGCAATTTCATCCTTATCGTCACCTCGCCGTCGTTCGTGGCAATTTCCGATCGCCTATTCTCTTCTCCGTTGTTTTGATCGGTGGCGATCTTTGTTGATGCTTATTGGTACGGCGTGTTAG

Coding sequence (CDS)

ATGCCTTTTTGGAAACCCGCTGTCACCGGTAACCGCCGGTTTCCATCATTGCTTGGCGGAGATTATTACTTTACCCCACACATTCACGTCTCACTCCTAATCTCTTCTCTATTTCCTGACGCAATTTCATCCTTATCGTCACCTCGCCGTCGTTCGTGGCAATTTCCGATCGCCTATTCTCTTCTCCGTTGTTTTGATCGGTGGCGATCTTTGTTGATGCTTATTGGTACGGCGTGTTAG

Protein sequence

MPFWKPAVTGNRRFPSLLGGDYYFTPHIHVSLLISSLFPDAISSLSSPRRRSWQFPIAYSLLRCFDRWRSLLMLIGTAC
Homology
[Close]
BLAST of PI0015994 vs. NCBI nr
Match: KAE8650248.1 (hypothetical protein Csa_010335 [Cucumis sativus])

HSP 1 Score: 113.6 bits (283), Expect = 7.7e-22
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0 

Query: 2   PFWKPAVTGNRRFPSLLGGDYYFTPHIHVSLLISSLFPDAISSLSSPRRRSWQFPIA 59
           PFWK  VTGNRRFPSLLGG +YFTPHIHVSLLISSLFPDAISSLSSPRRRSWQFP+A
Sbjct: 206 PFWKSTVTGNRRFPSLLGGVHYFTPHIHVSLLISSLFPDAISSLSSPRRRSWQFPVA 262

The following BLAST results are available for this feature:
BLAST of PI0015994 vs.
Match NameE-valueIdentityDescription
BLAST of PI0015994 vs.
Match NameE-valueIdentityDescription
BLAST of PI0015994 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650248.17.7e-2291.23hypothetical protein Csa_010335 [Cucumis sativus][more]
BLAST of PI0015994 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0015994.1PI0015994.1mRNA