PI0015978 (gene) Melon (PI 482460) v1

Overview


Name	PI0015978
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Methyltransferase FkbM family
Location	chr09: 1016922 .. 1017080 (-)
RNA-Seq Expression	PI0015978
Synteny	PI0015978

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATACTTTGTTCGGTTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCACCCCAACAATACTTAATAATAATAATGGCGAAACCCATAGCTCACAATCAAGAAACAATAAAGGGAAATCCAAGACCCAGACATCCACTCAACAACGCAACCGCTAG

mRNA sequence

ATGAATACTTTGTTCGGTTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCACCCCAACAATACTTAATAATAATAATGGCGAAACCCATAGCTCACAATCAAGAAACAATAAAGGGAAATCCAAGACCCAGACATCCACTCAACAACGCAACCGCTAG

Coding sequence (CDS)

ATGAATACTTTGTTCGGTTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCACCCCAACAATACTTAATAATAATAATGGCGAAACCCATAGCTCACAATCAAGAAACAATAAAGGGAAATCCAAGACCCAGACATCCACTCAACAACGCAACCGCTAG

Protein sequence

MNTLFGLFDSFAAQILFTPTILNNNNGETHSSQSRNNKGKSKTQTSTQQRNR

Homology

[Close]

BLAST of PI0015978 vs. ExPASy TrEMBL
Match: A0A0A0KM86 (Methyltransferase FkbM family OS=Cucumis sativus OX=3659 GN=Csa_5G146920 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 1  MNTLFGLFDSFAAQILFTPTILNNNNGETHSSQSRNNKGKSKTQTSTQQRNR 53
          MN+LFGLFDSFAAQILF   +LN NNG THSSQSR + G+SKTQ  TQQ NR
Sbjct: 1  MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR 52

[Close]

BLAST of PI0015978 vs. NCBI nr
Match: KGN49969.1 (hypothetical protein Csa_000477 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-08
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 1  MNTLFGLFDSFAAQILFTPTILNNNNGETHSSQSRNNKGKSKTQTSTQQRNR 53
          MN+LFGLFDSFAAQILF   +LN NNG THSSQSR + G+SKTQ  TQQ NR
Sbjct: 1  MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR 52

The following BLAST results are available for this feature:

BLAST of PI0015978 vs.


Match Name	E-value	Identity	Description

BLAST of PI0015978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM86	1.2e-08	73.08	Methyltransferase FkbM family OS=Cucumis sativus OX=3659 GN=Csa_5G146920 PE=4 SV...	[more]

BLAST of PI0015978 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49969.1	2.4e-08	73.08	hypothetical protein Csa_000477 [Cucumis sativus]	[more]

BLAST of PI0015978 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015978.1	PI0015978.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity