PI0015945 (gene) Melon (PI 482460) v1

Overview
NamePI0015945
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 30584643 .. 30585375 (+)
RNA-Seq ExpressionPI0015945
SyntenyPI0015945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACTAAACCACTTTCACCTCCACCGCCGGCCACAGACGAACCGGAAGTTCCACCTCCACAACTCACACCTCCACCGTCGGCACTATCTAAACCACCTTCATCTTCACCGCCGGCCACGGACGAACCGGAAGTTCCACCTCCACCAACTGAACTCACACCGCCGGCCACGGACGAACCGGAAGTTCCACTTCCACCAACTGAACTCACACCTCCACCGTCGACACTGTCTAAACCACCTCCACCTCCACCATTCCCGATACTCAATCGAGCGCTTCGGCGTCGGAGGATATCAGCCACCCAAGAAGAAGGATTGGGAACTCTGGAAATAAGGGAGGAAAGCCGACCACAAACAGAGATCATAGAAGCAAGCCAACCACAAACAGAGATCACAGAAGTCCCCGAGCCAACTCAAGATTTTATTGTAATGAAATCTTCCGATTCATCAAATTTGTCAATCCAATCCATGGAGAAGGAAGGTCGGCAAGAAGTCGATACGAAACTGGAAAGACTTTGGAGAAGAACTTGGACAATATCGACCTTAGTGCTTGGGGCAGTTATCTTAGGCTCTACTACCCAAACAAGTCTCTTCAAAGGTACTTTTCAATGGATTATTAAACCTCTGGTATTATTTTGTTATGGTAGCTTTGGGTCTGCCTTTATTGCTTCTTTCTTATTGCTTGCATGCTGTAATTACTGTGGTAGAAAATATGTTTCTTGGGCATGGATAA

mRNA sequence

ATGGCTACTAAACCACTTTCACCTCCACCGCCGGCCACAGACGAACCGGAAGTTCCACCTCCACAACTCACACCTCCACCGTCGGCACTATCTAAACCACCTTCATCTTCACCGCCGGCCACGGACGAACCGGAAGTTCCACCTCCACCAACTGAACTCACACCGCCGGCCACGGACGAACCGGAAGTTCCACTTCCACCAACTGAACTCACACCTCCACCGTCGACACTGTCTAAACCACCTCCACCTCCACCATTCCCGATACTCAATCGAGCGCTTCGGCGTCGGAGGATATCAGCCACCCAAGAAGAAGGATTGGGAACTCTGGAAATAAGGGAGGAAAGCCGACCACAAACAGAGATCATAGAAGCAAGCCAACCACAAACAGAGATCACAGAAGTCCCCGAGCCAACTCAAGATTTTATTGTAATGAAATCTTCCGATTCATCAAATTTGTCAATCCAATCCATGGAGAAGGAAGGTCGGCAAGAAGTCGATACGAAACTGGAAAGACTTTGGAGAAGAACTTGGACAATATCGACCTTAGTGCTTGGGGCAGTTATCTTAGGCTCTACTACCCAAACAAGTCTCTTCAAAGAAAATATGTTTCTTGGGCATGGATAA

Coding sequence (CDS)

ATGGCTACTAAACCACTTTCACCTCCACCGCCGGCCACAGACGAACCGGAAGTTCCACCTCCACAACTCACACCTCCACCGTCGGCACTATCTAAACCACCTTCATCTTCACCGCCGGCCACGGACGAACCGGAAGTTCCACCTCCACCAACTGAACTCACACCGCCGGCCACGGACGAACCGGAAGTTCCACTTCCACCAACTGAACTCACACCTCCACCGTCGACACTGTCTAAACCACCTCCACCTCCACCATTCCCGATACTCAATCGAGCGCTTCGGCGTCGGAGGATATCAGCCACCCAAGAAGAAGGATTGGGAACTCTGGAAATAAGGGAGGAAAGCCGACCACAAACAGAGATCATAGAAGCAAGCCAACCACAAACAGAGATCACAGAAGTCCCCGAGCCAACTCAAGATTTTATTGTAATGAAATCTTCCGATTCATCAAATTTGTCAATCCAATCCATGGAGAAGGAAGGTCGGCAAGAAGTCGATACGAAACTGGAAAGACTTTGGAGAAGAACTTGGACAATATCGACCTTAGTGCTTGGGGCAGTTATCTTAGGCTCTACTACCCAAACAAGTCTCTTCAAAGAAAATATGTTTCTTGGGCATGGATAA

Protein sequence

MATKPLSPPPPATDEPEVPPPQLTPPPSALSKPPSSSPPATDEPEVPPPPTELTPPATDEPEVPLPPTELTPPPSTLSKPPPPPPFPILNRALRRRRISATQEEGLGTLEIREESRPQTEIIEASQPQTEITEVPEPTQDFIVMKSSDSSNLSIQSMEKEGRQEVDTKLERLWRRTWTISTLVLGAVILGSTTQTSLFKENMFLGHG
Homology
[Close]
BLAST of PI0015945 vs. NCBI nr
Match: XP_038868614.1 (basic proline-rich protein-like, partial [Salvelinus namaycush])

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-04
Identity = 48/89 (53.93%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 5   PLSPPPPATDEPEVPPPQLTPPPSALSKPPSSSPPATDEPEVPPPPTELTPPATDEPEVP 64
           P  PPPP T  P  PPP LTPPP  L+ PP + PP T  P  PPPPT   PP T  P  P
Sbjct: 201 PPPPPPPPTPPPPTPPPPLTPPPPPLTPPPPTPPPPTPPPLTPPPPT--PPPPTPPPLTP 260

Query: 65  LPPT------ELTPPPSTLSKPPPPPPFP 88
            PPT       LTPPP  L+ PPPPPP P
Sbjct: 261 PPPTPPPPPPPLTPPPPPLTPPPPPPPPP 287

The following BLAST results are available for this feature:
BLAST of PI0015945 vs.
Match NameE-valueIdentityDescription
BLAST of PI0015945 vs.
Match NameE-valueIdentityDescription
BLAST of PI0015945 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038868614.13.8e-0453.93basic proline-rich protein-like, partial [Salvelinus namaycush][more]
BLAST of PI0015945 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0015945.1PI0015945.1mRNA