PI0015577 (gene) Melon (PI 482460) v1

Overview
NamePI0015577
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 18211205 .. 18211775 (-)
RNA-Seq ExpressionPI0015577
SyntenyPI0015577
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGACCCTGGAAGGTTCATTATCCCATGTTCAATAGGCAGTATAGATCTTGGTCGCATACTATGTGATTTTGGAGCCAATATTAATGTAACGACCACAAGTTCGAGCCTCTTTAAGGTAATTACTCTCTTTAATTTTGGTTTATTAAGAGAAAGAGTTGGGTTTTATTAGGATTTATTTGAAATTTTAGGATTTTTGGGAGTTAGAGTTGCAAAATGACTTTTAATTGGACATAAGGGCATTTTGGTCATTTTCCAGATTTATAAACCTTTTTTTTCAACCCTTAAACCCTTTCCTTCCTTTCATTTTCAGTTTTTCTTCTTCTCCTTCTTGCATTCAGCCGCCGCGCAGCTCTCTCCTCCCCAGTCTCCTTGCGCCGCGCATTGTCTTCGTCGTGTTGGAAGTTCGCCGTCTTCCCTTGCCGCCGGGAAAGGTTCCGTGGTTGTTATTTGAGCGTTCTGGGTTGCGTTTTCGCGAAGTGTGGTGGTGTGGAGGAGCTTCCTTGTTCTTCCCCGTTCGTTTAGCCTTCTCTGGTAAGTTTCCAAGCGTTCCTTCACGTTTCACTTAA

mRNA sequence

ATGCGAGACCCTGGAAGGTTCATTATCCCATGTTCAATAGGCAGTATAGATCTTGGTCGCATACTATGTGATTTTGGAGCCAATATTAATGTAACGACCACAAGTTCGAGCCTCTTTAAGCCGCCGCGCAGCTCTCTCCTCCCCAGTCTCCTTGCGCCGCGCATTGTCTTCGTCGTGTTGGAAGTTCGCCGTCTTCCCTTGCCGCCGGGAAAGGTTCCGTGGTTGTTATTTGAGCGTTCTGGGTTGCGTTTTCGCGAAGTGTGGTGGTGTGGAGGAGCTTCCTTGTTCTTCCCCGTTCGTTTAGCCTTCTCTGGTAAGTTTCCAAGCGTTCCTTCACGTTTCACTTAA

Coding sequence (CDS)

ATGCGAGACCCTGGAAGGTTCATTATCCCATGTTCAATAGGCAGTATAGATCTTGGTCGCATACTATGTGATTTTGGAGCCAATATTAATGTAACGACCACAAGTTCGAGCCTCTTTAAGCCGCCGCGCAGCTCTCTCCTCCCCAGTCTCCTTGCGCCGCGCATTGTCTTCGTCGTGTTGGAAGTTCGCCGTCTTCCCTTGCCGCCGGGAAAGGTTCCGTGGTTGTTATTTGAGCGTTCTGGGTTGCGTTTTCGCGAAGTGTGGTGGTGTGGAGGAGCTTCCTTGTTCTTCCCCGTTCGTTTAGCCTTCTCTGGTAAGTTTCCAAGCGTTCCTTCACGTTTCACTTAA

Protein sequence

MRDPGRFIIPCSIGSIDLGRILCDFGANINVTTTSSSLFKPPRSSLLPSLLAPRIVFVVLEVRRLPLPPGKVPWLLFERSGLRFREVWWCGGASLFFPVRLAFSGKFPSVPSRFT
Homology
BLAST of PI0015577 vs. ExPASy TrEMBL
Match: A0A6J1DVY2 (uncharacterized protein LOC111024002 OS=Momordica charantia OX=3673 GN=LOC111024002 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-04
Identity = 36/83 (43.37%), Postives = 45/83 (54.22%), Query Frame = 0

Query: 2   RDPGRFIIPCSIGSIDLGRILCDFGANINVTTTSSSLFKPPRSSLLPSLLAPRIVFVVLE 61
           +DPG F IPCS+GS +LGR LCD GA IN+   S S+FK     L      P  V + L 
Sbjct: 43  KDPGSFTIPCSVGSKNLGRALCDLGARINL--MSLSVFK----ELNIGEARPTTVTLQLA 102

Query: 62  VRRLPLPPGKVPWLLFERSGLRF 85
            R +  P GK+  LL +   L F
Sbjct: 103 DRSIKKPEGKIEDLLVKVDELIF 119

BLAST of PI0015577 vs. ExPASy TrEMBL
Match: A0A072THS3 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_0042s0100 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.7e-04
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0

Query: 1  MRDPGRFIIPCSIGSIDLGRILCDFGANINVTTTS 36
          +++PG FIIPCSIG +D+GR LCD GA+IN+   S
Sbjct: 61 LKNPGAFIIPCSIGPVDIGRALCDLGASINLMPLS 95

BLAST of PI0015577 vs. NCBI nr
Match: XP_038904380.1 (uncharacterized protein LOC120090738 [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0

Query: 1   MRDPGRFIIPCSIGSIDLGRILCDFGANINVTTTSSSLFKPPRSSLLPSLLAPRIVFVVL 60
           MRDPG F IPCSIG + +G++LCD GA IN+     S+FK     L    LAP +  + L
Sbjct: 98  MRDPGSFTIPCSIGGLYIGQVLCDLGATINLIPL--SIFK----QLNVGQLAPTMATLQL 157

Query: 61  EVRRLPLPPGKV 73
             R L  P GK+
Sbjct: 158 ADRSLVHPEGKI 163

BLAST of PI0015577 vs. NCBI nr
Match: XP_038902448.1 (uncharacterized protein LOC120089094 [Benincasa hispida])

HSP 1 Score: 55.1 bits (131), Expect = 4.7e-04
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = 0

Query: 2  RDPGRFIIPCSIGSIDLGRILCDFGANINVTTTSSSLFKPPRSSLLPSLLAPRIVFVVLE 61
          ++PG F +PCSIG +D+G  LCD GANIN+     S+FK     L+     P  V + L 
Sbjct: 17 KEPGSFTVPCSIGGLDVGHTLCDLGANINLMPL--SIFK----KLMIGEAQPTSVTLQLA 76

Query: 62 VRRLPLPPGKVPWLLFERSGLRF 85
           R +  P GK+  +L +   L F
Sbjct: 77 DRTIKYPEGKIEDVLVKVDNLIF 93

BLAST of PI0015577 vs. NCBI nr
Match: XP_038904316.1 (uncharacterized protein LOC120090670 [Benincasa hispida])

HSP 1 Score: 55.1 bits (131), Expect = 4.7e-04
Identity = 33/72 (45.83%), Postives = 41/72 (56.94%), Query Frame = 0

Query: 1  MRDPGRFIIPCSIGSIDLGRILCDFGANINVTTTSSSLFKPPRSSLLPSLLAPRIVFVVL 60
          MRDPG F IPCSI  + +G+  CD GANIN+     S+FK     L    LAP +V + L
Sbjct: 21 MRDPGSFTIPCSIRGVYIGQAFCDLGANINLMPL--SIFK----QLRIGKLAPTMVTLQL 80

Query: 61 EVRRLPLPPGKV 73
            R L  P GK+
Sbjct: 81 ADRSLVPPEGKI 86

BLAST of PI0015577 vs. NCBI nr
Match: XP_022157244.1 (uncharacterized protein LOC111024002 [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 6.2e-04
Identity = 36/83 (43.37%), Postives = 45/83 (54.22%), Query Frame = 0

Query: 2   RDPGRFIIPCSIGSIDLGRILCDFGANINVTTTSSSLFKPPRSSLLPSLLAPRIVFVVLE 61
           +DPG F IPCS+GS +LGR LCD GA IN+   S S+FK     L      P  V + L 
Sbjct: 43  KDPGSFTIPCSVGSKNLGRALCDLGARINL--MSLSVFK----ELNIGEARPTTVTLQLA 102

Query: 62  VRRLPLPPGKVPWLLFERSGLRF 85
            R +  P GK+  LL +   L F
Sbjct: 103 DRSIKKPEGKIEDLLVKVDELIF 119

BLAST of PI0015577 vs. NCBI nr
Match: XP_012437587.1 (PREDICTED: uncharacterized protein LOC105763780 [Gossypium raimondii])

HSP 1 Score: 54.7 bits (130), Expect = 6.2e-04
Identity = 33/76 (43.42%), Postives = 42/76 (55.26%), Query Frame = 0

Query: 1   MRDPGRFIIPCSIGSIDLGRILCDFGANINVTTTSSSLFKPPRSSLLPSLLAPRIVFVVL 60
           M+DPG F IPCSIG+  LG+ LCDFGANIN+   S+         L    + P  V + L
Sbjct: 149 MKDPGSFTIPCSIGNHYLGKALCDFGANINLMPLSTF------RKLGIGHMKPTTVTLQL 208

Query: 61  EVRRLPLPPGKVPWLL 77
             R L  P GK+  +L
Sbjct: 209 ADRSLAQPEGKIKDIL 218

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DVY23.0e-0443.37uncharacterized protein LOC111024002 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A072THS36.7e-0460.00Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_0042s0100 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
XP_038904380.11.2e-0445.83uncharacterized protein LOC120090738 [Benincasa hispida][more]
XP_038902448.14.7e-0438.55uncharacterized protein LOC120089094 [Benincasa hispida][more]
XP_038904316.14.7e-0445.83uncharacterized protein LOC120090670 [Benincasa hispida][more]
XP_022157244.16.2e-0443.37uncharacterized protein LOC111024002 [Momordica charantia][more]
XP_012437587.16.2e-0443.42PREDICTED: uncharacterized protein LOC105763780 [Gossypium raimondii][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0015577.1PI0015577.1mRNA