PI0015537 (gene) Melon (PI 482460) v1

Overview


Name	PI0015537
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr02: 20055699 .. 20056258 (-)
RNA-Seq Expression	PI0015537
Synteny	PI0015537

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTACATGAACTCAATGTTTTTTAAGGTTTTGTTTGTTGTCATTCTCATAATTACTTCTTCCCAATATGTGGCGTTTGGAAGACAGATTGCTGATTCCACTCCTCATTATCGATCTTGTAAGAATCCCAATAATCAAAATGACAATTTTCAATGATTTTTCTTTCCAATATTTCATGCACCAAATTTTTGAAACCATGTTTCAAAGTCTGGTACTATATGGTGAAATATATAAAATTGTCCTCTTTTTTTTTTTTTTTCACTATATAGACTTAGTGTGATTAGGGTAGTAGAAGATTCAAACAATGTACTTTGGGTTACTAACACATTCGTATTCCAATGAGCTATGTTTGGCTCTTTACTAAACCTAGTTAAGTTTTCTTTTAATTGGTTTAATTGTAATTGTTCTCATATATAATTGTATATATGATTGCAGATCATAAAAATCATAGGGAAAAGGAGAAGGATTCAAGAGTTGAACATCATCCCCAAACTCATGTTCCAAGAAGGTGCGTTATATGGAGGAAGTGGAGGGGAGCCATCAAGTTTAATTAG

mRNA sequence

ATGGCTTCCTACATGAACTCAATGTTTTTTAAGGTTTTGTTTGTTGTCATTCTCATAATTACTTCTTCCCAATATGTGGCGTTTGGAAGACAGATTGCTGATTCCACTCCTCATTATCGATCTTATCATAAAAATCATAGGGAAAAGGAGAAGGATTCAAGAGTTGAACATCATCCCCAAACTCATGTTCCAAGAAGGTGCGTTATATGGAGGAAGTGGAGGGGAGCCATCAAGTTTAATTAG

Coding sequence (CDS)

ATGGCTTCCTACATGAACTCAATGTTTTTTAAGGTTTTGTTTGTTGTCATTCTCATAATTACTTCTTCCCAATATGTGGCGTTTGGAAGACAGATTGCTGATTCCACTCCTCATTATCGATCTTATCATAAAAATCATAGGGAAAAGGAGAAGGATTCAAGAGTTGAACATCATCCCCAAACTCATGTTCCAAGAAGGTGCGTTATATGGAGGAAGTGGAGGGGAGCCATCAAGTTTAATTAG

Protein sequence

MASYMNSMFFKVLFVVILIITSSQYVAFGRQIADSTPHYRSYHKNHREKEKDSRVEHHPQTHVPRRCVIWRKWRGAIKFN

Homology

[Close]

BLAST of PI0015537 vs. ExPASy TrEMBL
Match: A0A0A0KUB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017210 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11
Identity = 48/68 (70.59%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 1  MASYMNSMFFKVLFVVILIITSSQYVAFGR-QIADSTPHYRSYHKNHREKEKD-SRVEHH 60
          MAS  +SM FK LFVVILIITSSQYVAFGR  I+D+ PHYRS HK+ REKEK  SRVEH 
Sbjct: 1  MASNKDSMLFKALFVVILIITSSQYVAFGRLHISDAIPHYRSDHKDDREKEKTISRVEHL 60

Query: 61 PQTHVPRR 67
           QT  PR+
Sbjct: 61 SQTDTPRK 68

[Close]

BLAST of PI0015537 vs. NCBI nr
Match: KAE8649130.1 (hypothetical protein Csa_014869 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 6.2e-11
Identity = 48/68 (70.59%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 1  MASYMNSMFFKVLFVVILIITSSQYVAFGR-QIADSTPHYRSYHKNHREKEKD-SRVEHH 60
          MAS  +SM FK LFVVILIITSSQYVAFGR  I+D+ PHYRS HK+ REKEK  SRVEH 
Sbjct: 22 MASNKDSMLFKALFVVILIITSSQYVAFGRLHISDAIPHYRSDHKDDREKEKTISRVEHL 81

Query: 61 PQTHVPRR 67
           QT  PR+
Sbjct: 82 SQTDTPRK 89

The following BLAST results are available for this feature:

BLAST of PI0015537 vs.


Match Name	E-value	Identity	Description

BLAST of PI0015537 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUB2	3.0e-11	70.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017210 PE=4 SV=1	[more]

BLAST of PI0015537 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649130.1	6.2e-11	70.59	hypothetical protein Csa_014869 [Cucumis sativus]	[more]

BLAST of PI0015537 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015537.1	PI0015537.1	mRNA