PI0015500 (gene) Melon (PI 482460) v1

Overview


Name	PI0015500
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
Location	tig00003741: 26011 .. 26373 (-)
RNA-Seq Expression	PI0015500
Synteny	PI0015500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTGCTTTACGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTGTTATTCCTATTTTGGCATTTCTAATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTCGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGGTACAATTTAGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTCGAAACAGTTTTTCTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCATTGGAATGGTCTTAG

mRNA sequence

ATGTTTCTGCTTTACGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTGTTATTCCTATTTTGGCATTTCTAATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTCGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGGTACAATTTAGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTCGAAACAGTTTTTCTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCATTGGAATGGTCTTAG

Coding sequence (CDS)

ATGTTTCTGCTTTACGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTGTTATTCCTATTTTGGCATTTCTAATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTCGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGGTACAATTTAGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTCGAAACAGTTTTTCTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCATTGGAATGGTCTTAG

Protein sequence

MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS

Homology

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BLAST of PI0015500 vs. ExPASy Swiss-Prot
Match: Q4VZH0 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhC PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 9.5e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. ExPASy Swiss-Prot
Match: P52765 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Lupinus luteus OX=3873 GN=ndhC PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.0e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFW FLIISS+IPILAFLISG+LAP+SK PEKLSSYESGIEPMGDAW+QFRI
Sbjct: 1   MFLLYEYDIFWAFLIISSLIPILAFLISGILAPISKGPEKLSSYESGIEPMGDAWLQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. ExPASy Swiss-Prot
Match: Q49KZ3 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhC PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-56
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFW FLIISSVIPILAF ISG+LAP+SK PEKLSSYESGIEPMGDAW+QFRI
Sbjct: 1   MFLLYEYDIFWAFLIISSVIPILAFXISGILAPISKGPEKLSSYESGIEPMGDAWLQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. ExPASy Swiss-Prot
Match: Q9M3L9 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Spinacia oleracea OX=3562 GN=ndhC PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-56
Identity = 113/120 (94.17%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFW FLIISSVIPILAFL SG+LAP+SK PEKLSSYESGIEPMGDAW+QFRI
Sbjct: 1   MFLLYEYDIFWAFLIISSVIPILAFLFSGILAPISKGPEKLSSYESGIEPMGDAWLQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFD+LGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDILGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

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BLAST of PI0015500 vs. ExPASy Swiss-Prot
Match: Q09FV6 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Nandina domestica OX=41776 GN=ndhC PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 7.5e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLL+EYDIFW FLIISSVIPILAFLISGVLAP+S+ PEKLSSYESGIEPMGDAW+QFRI
Sbjct: 1   MFLLHEYDIFWAFLIISSVIPILAFLISGVLAPISEGPEKLSSYESGIEPMGDAWLQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. ExPASy TrEMBL
Match: A0A218KG53 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhC PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. ExPASy TrEMBL
Match: A0A6H0ETI4 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhC PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. ExPASy TrEMBL
Match: A0A1X9Q1U8 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhC PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. ExPASy TrEMBL
Match: A0A1P8LFN3 (NADH-quinone oxidoreductase subunit A OS=Citrullus mucosospermus OX=519315 GN=ndhC PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. ExPASy TrEMBL
Match: A0A6M3RTZ0 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ndhC PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. NCBI nr
Match: YP_009004049.1 (NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix] >YP_009317391.1 NADH dehydrogenase subunit 3 [Coccinia grandis] >YP_009325994.1 NADH dehydrogenase subunit 3 [Citrullus lanatus] >YP_009346489.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis x hytivus] >YP_009348036.1 NADH dehydrogenase subunit 3 [Citrullus mucosospermus] >YP_009420799.1 NADH dehydrogenase subunit 3 [Citrullus colocynthis] >YP_009431562.1 NADH dehydrogenase subunit 3 [Citrullus amarus] >YP_009431647.1 NADH dehydrogenase subunit 3 [Citrullus rehmii] >YP_009456066.1 NADH dehydrogenase subunit 3 [Momordica charantia] >YP_009456151.1 NADH dehydrogenase subunit 3 [Lagenaria siceraria] >YP_009751911.1 NADH dehydrogenase subunit C [Cyclanthera pedata] >YP_009751995.1 NADH dehydrogenase subunit C [Cionosicys macranthus] >YP_009752080.1 NADH dehydrogenase subunit C [Dendrosicyos socotranus] >YP_009752248.1 NADH dehydrogenase subunit C [Trichosanthes baviensis] >YP_009752332.1 NADH dehydrogenase subunit C [Bryonia marmorata] >YP_009752417.1 NADH dehydrogenase subunit C [Trichosanthes tricuspidata] >YP_009752501.1 NADH dehydrogenase subunit C [Trichosanthes tubiflora] >YP_009752586.1 NADH dehydrogenase subunit C [Trichosanthes homophylla] >YP_009753094.1 NADH dehydrogenase subunit C [Corallocarpus boehmii] >YP_009753179.1 NADH dehydrogenase subunit C [Trichosanthes truncata] >YP_009753263.1 NADH dehydrogenase subunit C [Nothoalsomitra suberosa] >YP_009753625.1 NADH dehydrogenase subunit C [Trichosanthes wallichiana] >YP_009753710.1 NADH dehydrogenase subunit C [Trichosanthes nervifolia] >YP_009753794.1 NADH dehydrogenase subunit C [Trichosanthes pilosa] >YP_009753879.1 NADH dehydrogenase subunit C [Trichosanthes lobata] >YP_009945422.1 NADH-plastoquinone oxidoreductase subunit 3 [Sechium edule] >YP_247604.1 NADH dehydrogenase subunit 3 [Cucumis sativus] >Q4VZH0.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit 3; AltName: Full=NADH-plastoquinone oxidoreductase subunit 3 [Cucumis sativus] >ALF03306.1 NADH dehydrogenase subunit 3 [Cucumis sativus var. hardwickii] >APW82466.1 NADH dehydrogenase subunit 3 [Citrullus lanatus subsp. vulgaris] >AVE15336.1 NdhC [Cucumis sativus var. sativus] >QIT04055.1 NADH dehydrogenase subunit C [Luffa aegyptiaca] >QIT05067.1 NADH dehydrogenase subunit C [Trichosanthes kirilowii] >QJD26476.1 NdhC [Trichosanthes kirilowii var. japonica] >QJD26650.1 NdhC [Trichosanthes rosthornii] >QKX48478.1 NADH-plastoquinone oxidoreductase subunit 3 [Luffa acutangula] >QNM38536.1 NADH-plastoquinone oxidoreductase subunit 3 [Lagenaria siceraria var. microcarpa] >QZL38598.1 NADH dehydrogenase subunit C [Citrullus naudinianus] >QZL38686.1 NADH dehydrogenase subunit C [Citrullus ecirrhosus])

HSP 1 Score: 227.3 bits (578), Expect = 7.3e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. NCBI nr
Match: YP_009751658.1 (NADH dehydrogenase subunit C [Hodgsonia heteroclita] >QIT04391.1 NADH dehydrogenase subunit C [Hodgsonia heteroclita])

HSP 1 Score: 226.9 bits (577), Expect = 9.5e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISG+LAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGILAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. NCBI nr
Match: YP_010131099.1 (NADH-plastoquinone oxidoreductase subunit 3 [Benincasa hispida] >QPZ75746.1 NADH-plastoquinone oxidoreductase subunit 3 [Benincasa hispida] >QSQ72315.1 NADH dehydrogenase subunit C [Benincasa hispida])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEA+IFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEAIIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. NCBI nr
Match: QHB75968.1 (NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAF+ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFIISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. NCBI nr
Match: YP_009236285.1 (NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum] >YP_009430632.1 NADH dehydrogenase subunit 3 [Gynostemma cardiospermum] >YP_009439809.1 NADH dehydrogenase subunit 3 [Gynostemma laxiflorum] >YP_009439896.1 NADH dehydrogenase subunit 3 [Gynostemma caulopterum] >YP_009439983.1 NADH dehydrogenase subunit 3 [Gynostemma pentagynum] >YP_009440162.1 NADH dehydrogenase subunit 3 [Gynostemma longipes] >YP_009440249.1 NADH dehydrogenase subunit 3 [Gynostemma burmanicum (nom. inval.)] >YP_009440336.1 NADH dehydrogenase subunit 3 [Gynostemma pubescens] >YP_009468866.1 NADH dehydrogenase subunit 3 [Gynostemma compressum] >YP_009674396.1 NADH dehydrogenase subunit 3 [Siraitia grosvenorii] >YP_009738206.1 NADH dehydrogenase subunit 3 [Siraitia siamensis] >YP_009751827.1 NADH dehydrogenase subunit C [Indofevillea khasiana] >YP_009752840.1 NADH dehydrogenase subunit C [Baijiania yunnanensis] >YP_009753009.1 NADH dehydrogenase subunit C [Gerrardanthus macrorhizus] >YP_010015144.1 NADH dehydrogenase subunit 3 [Gynostemma yixingense] >AMF84030.1 NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum] >ANI25190.1 NADH dehydrogenase subunit 3 [Gynostemma pentaphyllum] >ART65013.1 NADH dehydrogenase subunit 3 [Gynostemma pentaphyllum] >ART65100.1 NADH dehydrogenase subunit 3 [Gynostemma cardiospermum] >ATG86680.1 NADH dehydrogenase subunit 3 [Gynostemma laxiflorum])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAW+QFRI
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWLQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. TAIR 10
Match: ATCG00440.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein )

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-54
Identity = 107/120 (89.17%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
           MFLLYEYDIFW FL+ISS IP+LAFLISGVL+P+ K PEKLSSYESGIEP+GDAW+QFRI
Sbjct: 1   MFLLYEYDIFWAFLLISSAIPVLAFLISGVLSPIRKGPEKLSSYESGIEPIGDAWLQFRI 60

Query: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
           RYYMFALVFVVFDVETVFLYPWAMSFDVLGVS FIEA IFVLILI+GLVYAWRKGALEWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAFIEAFIFVLILILGLVYAWRKGALEWS 120

[Close]

BLAST of PI0015500 vs. TAIR 10
Match: AT2G07751.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein )

HSP 1 Score: 70.9 bits (172), Expect = 8.1e-13
Identity = 39/109 (35.78%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 12  VFLIISSVIPILAFLISGVLAPL----SKEPEKLSSYESGIEPMGDAWVQFRIRYYMFAL 71
           ++L+IS ++   + ++ GV  P     S  PEKLS+YE G +P GDA  +F IR+Y+ ++
Sbjct: 9   IYLVISLLV---SLILLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRFYLVSI 68

Query: 72  VFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA 117
           +F++ D+E  F +PWA+  + + +  F   + F+ IL +G +Y W++GA
Sbjct: 69  LFLIPDLEVTFFFPWAVPPNKIDLFGFWSMMAFLFILTIGFLYEWKRGA 114

[Close]

BLAST of PI0015500 vs. TAIR 10
Match: ATMG00990.1 (NADH dehydrogenase 3 )

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 40/118 (33.90%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 3   LLYEYDIFWVFLIISSVIPILAFLISGVLAPL----SKEPEKLSSYESGIEPMGDAWVQF 62
           ++ E+    ++L+IS ++   + ++ GV  P     S  PEKLS+YE G +P GDA  +F
Sbjct: 1   MMSEFAPISIYLVISLLV---SLILLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRF 60

Query: 63  RIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA 117
            IR+Y+ +++F++ D+E  F +PWA+  + + +  F   + F+ IL +G +Y W++GA
Sbjct: 61  DIRFYLVSILFLIPDLEVTFFFPWAVPPNKIDLFGFWSMMAFLFILTIGFLYEWKRGA 115

The following BLAST results are available for this feature:

BLAST of PI0015500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH0	9.5e-59	100.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus OX=36...	[more]
P52765	2.0e-56	95.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Lupinus luteus OX=387...	[more]
Q49KZ3	3.4e-56	95.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Eucalyptus globulus s...	[more]
Q9M3L9	3.4e-56	94.17	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Spinacia oleracea OX=...	[more]
Q09FV6	7.5e-56	95.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Nandina domestica OX=...	[more]

BLAST of PI0015500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG53	3.5e-56	100.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A6H0ETI4	3.5e-56	100.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Trichosanthes kirilow...	[more]
A0A1X9Q1U8	3.5e-56	100.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A1P8LFN3	3.5e-56	100.00	NADH-quinone oxidoreductase subunit A OS=Citrullus mucosospermus OX=519315 GN=nd...	[more]
A0A6M3RTZ0	3.5e-56	100.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Trichosanthes kirilow...	[more]

BLAST of PI0015500 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009004049.1	7.3e-56	100.00	NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix] >YP_009317391.1 NA...	[more]
YP_009751658.1	9.5e-56	99.17	NADH dehydrogenase subunit C [Hodgsonia heteroclita] >QIT04391.1 NADH dehydrogen...	[more]
YP_010131099.1	1.2e-55	99.17	NADH-plastoquinone oxidoreductase subunit 3 [Benincasa hispida] >QPZ75746.1 NADH...	[more]
QHB75968.1	1.2e-55	99.17	NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo]	[more]
YP_009236285.1	1.6e-55	99.17	NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum] >YP_009430...	[more]

BLAST of PI0015500 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00440.1	1.5e-54	89.17	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	[more]
AT2G07751.1	8.1e-13	35.78	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	[more]
ATMG00990.1	2.4e-12	33.90	NADH dehydrogenase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038430	NADH:ubiquinone oxidoreductase, subunit 3 superfamily	GENE3D	1.20.58.1610	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	coord: 1..120 e-value: 2.5E-44 score: 152.2
IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	PFAM	PF00507	Oxidored_q4	coord: 23..119 e-value: 2.3E-36 score: 123.9
IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	PANTHER	PTHR11058	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3	coord: 1..120
None	No IPR available	PANTHER	PTHR11058:SF12	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 3, CHLOROPLASTIC	coord: 1..120
IPR023043	NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid	HAMAP	MF_01394	NDH1_NuoA	coord: 3..120 score: 19.967321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015500.1	PI0015500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H