PI0015422 (gene) Melon (PI 482460) v1

Overview
NamePI0015422
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr09: 19568684 .. 19569212 (+)
RNA-Seq ExpressionPI0015422
SyntenyPI0015422
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTGGTAAAAAATTATATTAAAAAAAATATATCAAAATAATAACAAACAATTTCCCATAAAAAAAAAGAAAAAAAGGGAAAAGTCAGAGTCAGAGACCAAATCATCCCTTTCTATTTTATTTCGTTTGCATATTCCGGAATCCAAGTCCCAACCTCCGTATCAAAAAACACAAAAACTCTCACCGTCATCCTTCTCCATACATATCCATTTCTCTTCTCTCTATTCTTTACATAAACTGTTATAACTTTCTCTTTCCCATTTTACGATTTCCGTTTTTTTCTCGGTCCTTAACCTTCTCCATCTTCTTCGCCGACTTTCTTCTTCACCTTTCCTCCTGTTTTTCTCCGCCTTGGTAGCTACTCATCTCTTTCTCTATTTATGTCTGCTTTTTTTCGCAGTGAATTCTTCTTTGTGTGTTGGTGTTATAGTTGTGGATTTCTTTATGGTGGTGTCTTGCTGCTGATGTTGTTTTGTTTTTGTGTGTGGTTTGTTGTGGATTTTTTGGCATTGAAGGAAGGTGTGA

mRNA sequence

ATGCAAGTGAGTCAGAGACCAAATCATCCCTTTCTATTTTATTTCGTTTGCATATTCCGGAATCCAAGTCCCAACCTCCGTATCAAAAAACACAAAAACTCTCACCGTCATCCTTCTCCATACATATCCATTTCTCTTCTCTCTATTCTTTACATAAACTGTTATAACTTTCTCTTTCCCATTTTACGATTTCCGTTTTTTTCTCGGTCCTTAACCTTCTCCATCTTCTTCGCCGACTTTCTTCTTCACCTTTCCTCCTGTTTTTCTCCGCCTTGGAAGGTGTGA

Coding sequence (CDS)

ATGCAAGTGAGTCAGAGACCAAATCATCCCTTTCTATTTTATTTCGTTTGCATATTCCGGAATCCAAGTCCCAACCTCCGTATCAAAAAACACAAAAACTCTCACCGTCATCCTTCTCCATACATATCCATTTCTCTTCTCTCTATTCTTTACATAAACTGTTATAACTTTCTCTTTCCCATTTTACGATTTCCGTTTTTTTCTCGGTCCTTAACCTTCTCCATCTTCTTCGCCGACTTTCTTCTTCACCTTTCCTCCTGTTTTTCTCCGCCTTGGAAGGTGTGA

Protein sequence

MQVSQRPNHPFLFYFVCIFRNPSPNLRIKKHKNSHRHPSPYISISLLSILYINCYNFLFPILRFPFFSRSLTFSIFFADFLLHLSSCFSPPWKV
Homology
[Close]
BLAST of PI0015422 vs. ExPASy TrEMBL
Match: A0A0A0KS52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G634360 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-23
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 0 

Query: 23 SPNLRIKKHKNSHRHPSPYISISLLSILYINCYNFLFPILRFPFFSRSLTFSIFFADFLL 82
          SPNLRIK  K  HRHPSPYISISLLS+L+IN YNFL PILRFPF+SRSLT S FFA+FLL
Sbjct: 10 SPNLRIKNIKTLHRHPSPYISISLLSVLHINFYNFLSPILRFPFYSRSLTLSFFFANFLL 69

Query: 83 HLSSCFSPPW 93
          HLSSCFSPPW
Sbjct: 70 HLSSCFSPPW 79

[Close]
BLAST of PI0015422 vs. NCBI nr
Match: KGN52440.1 (hypothetical protein Csa_008213 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 3.7e-23
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 0 

Query: 23 SPNLRIKKHKNSHRHPSPYISISLLSILYINCYNFLFPILRFPFFSRSLTFSIFFADFLL 82
          SPNLRIK  K  HRHPSPYISISLLS+L+IN YNFL PILRFPF+SRSLT S FFA+FLL
Sbjct: 10 SPNLRIKNIKTLHRHPSPYISISLLSVLHINFYNFLSPILRFPFYSRSLTLSFFFANFLL 69

Query: 83 HLSSCFSPPW 93
          HLSSCFSPPW
Sbjct: 70 HLSSCFSPPW 79

The following BLAST results are available for this feature:
BLAST of PI0015422 vs.
Match NameE-valueIdentityDescription
BLAST of PI0015422 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS521.8e-2382.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G634360 PE=4 SV=1[more]
BLAST of PI0015422 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52440.13.7e-2382.86hypothetical protein Csa_008213 [Cucumis sativus][more]
BLAST of PI0015422 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0015422.1PI0015422.1mRNA