PI0015288 (gene) Melon (PI 482460) v1

Overview


Name	PI0015288
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr06: 19591787 .. 19594137 (-)
RNA-Seq Expression	PI0015288
Synteny	PI0015288

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACTTTACTAACTTCTTTTGTGCAAGGTGGTTCTGTGAAAGTTGCTAAGTGTGGGGTATGCGGTCTAGTCGGACATCCGAATGACAAATGCCCAGACTTAATTGAGGAAGCAAATGTCATATGTAAGTACGATCCCCATAGTAATACTTACAATTCCGGTTGGAGAGACAACCCAAATCTAAGGATGGGAAATGACAACCAAAGACCTTCACAAGCAACTTCCTCTTCAAACAATCAAGGTACAAATTTAGAAGATTTAGTTAAAGCTCTTACTACTAATACCATCTCTTTTCAAAATGAAATAAAGCAACAAATGTCTCATTTGACAAACGCAATTAGCAAGCTAGAAGGTAAAGGCAAACTTCCGGCACAACCGGATCATGCAAACGTAAGTGTCATCTCACTGAGAAGCGGTAAAATTCTAGAAACCTCTCCAAGTGAAGAAAATGTAACTTCTAACCCTATCCTTCTTAATAATAATGATGAGACTAAGGAAGAAAAAGTAGAAACAAATGCTCTACCATCCAGTTCCAACAAAGGTAAATCTCCAATTCTTGATTATACTCCTTATGTTCCTAAAACTCCTTTTCCTTCTAGGTTGGCTCCCAAGAAAAAGGAATCACCCAAGGAAGAAGAACTCTTGGAGATATTCAGAAAGGTGCAAATTAATCTACCTCTACTTGATGCGATCCAACAAGTTCCGAGGTATGCAAAATTTCTCAAAGAACTATGCACCAACAAAAGGAAAATCAAGGAAAAATCGATGGTAAGTCATAACGTTTCTGCACTTTTAAAGAACACTATTCCGGAGAAACAAAATGATCCCGGTATGTTTTCTCTTCCTTGCATAATAGGCAATAGGCCAATTTCCCATGCAATGCTTGACTTAGGAGCATCAATTAATGTCATGCCATATAGTGTATATAAAGATCTAGAATTGAATAACTTGCAAAAGACAAGTGTATGCATACAATTGGCTGATAGATCTTTTATTTCACCGCTAGGAATTGTAGAAGGTTTCCTTGTAAAAATTGACAAATTAATTTCTCCTGCGGATTTCTATATTTTAGAAATGAATGATGCATGTGCAAAACCATCCCACTCAATTCTATTAGGAAGACCTTGTCTAAAAACTGCAAAAGCAATAATAGATGTAGATAAAGGTTCCTTAAGTGTTGAATTCGATGGAGATGTTGTGACATTTAACATTTTTGAATCAATGAAATATCCTGAGGAATGTCTATCTTTATGTTGAATAGAATTGCATGACGAAATAGAAGAAATGCCTAATAATGATTATCTTTGTGAACAAGAAATTCATGAAAATGAAGAGTTGGTAGAAGTAGAATTAGAAAATAATCTTGAGAAAAATAATTGTGATAATCTTTTCTTCTCTCCACAGGAAATAGGGATTGAGCTCAAAGCTCTCCCACGAAACTTGAAGTACGTATTCTTAGGAGAAAAGAATACGCTTCCTGTCATCATTTCCAAGGAATTACACCAAAACTAAGAAGAAAGACTCATCGAAGTCTTGAAGAACAAAAAGAAAGCAATATGATGGACTTTAGAAGATCTTAAAGGTATTCCTTCTAATTTTTGCACACATAGAATAATTGTAACGACTGCAAACTCGGGATCATTGAGGTAATTTCTCTTTCTTAAATTCTTGTTTAAATTAAAAGAAAGAGTTGGGTTTACTAAGGTTACATTTGAAATTTTAGGATTTTTGGAATTAAAGTTGCAAAATACCTTTTATTTGGACATAAGGGTATTTTGGTCATTTTGGGCTCAAAACCCTTCTTCAACCCTTAAATCCTTATTTTCTCTCCTCTTTTCAGTTCTTCACTTCTCATTCTTGCACTCAGCCGCCGAGCAGCACTCTTTCTCCCCAGTTCCCTTGCGTCGTGCGTTGTCTTCGCCGTTCGAAAGCTCTCCGGTCATCGTTTCGCTGGAAAGGAAGCTTTGGTCTTTGGTTTGGGCGTTCTGGGCTATTTTTGCAAAGTGTGGAGGCGCTTCGTGGCTTTCTCGTCTTGTTGGTTTTCTTTCGGTAATTCTCTGATAAGACTATTTTCCTAGGAAAATATCTATCTTAATTAATAATAATAAATTGCAAATACTTATCAACATTGTATTTTTACATAGGAAATGACACAAAGCCCCTTCACAAGCCCTTGTGCACAAAAGCAAGCTAAAACAAGCTTCTTGCGGCCAGAAACTGTGAAATACAAATTCGAGGGCAAAATGGTAATTTTCCCGAAAGTATTCAAAAACCCTCTTCGCGGCAAAACTACTTCAGAACGCGTAGCTCATCGCAGACTGCCTACTTCGCGAGGCAATGCTTCATGA

mRNA sequence

ATGACTACTTTACTAACTTCTTTTGTGCAAGGTGGTTCTGTGAAAGTTGCTAAGTGTGGGGTATGCGGTCTAGTCGGACATCCGAATGACAAATGCCCAGACTTAATTGAGGAAGCAAATGTCATATGTAAGTACGATCCCCATAGTAATACTTACAATTCCGGTTGGAGAGACAACCCAAATCTAAGGATGGGAAATGACAACCAAAGACCTTCACAAGCAACTTCCTCTTCAAACAATCAAGGTACAAATTTAGAAGATTTAGTTAAAGCTCTTACTACTAATACCATCTCTTTTCAAAATGAAATAAAGCAACAAATGTCTCATTTGACAAACGCAATTAGCAAGCTAGAAGGTAAAGGCAAACTTCCGGCACAACCGGATCATGCAAACGTAAGTGTCATCTCACTGAGAAGCGGTAAAATTCTAGAAACCTCTCCAAGTGAAGAAAATGTAACTTCTAACCCTATCCTTCTTAATAATAATGATGAGACTAAGGAAGAAAAAGTAGAAACAAATGCTCTACCATCCAGTTCCAACAAAGTTCTTCACTTCTCATTCTTGCACTCAGCCGCCGAGCAGCACTCTTTCTCCCCAGTTCCCTTGCGTCGTGCGTTGTCTTCGCCGTTCGAAAGCTCTCCGGTCATCGTTTCGCTGGAAAGGAAGCTTTGGTCTTTGGTTTGGGCGTTCTGGGCTATTTTTGCAAAGTGTGGAGGCGCTTCGTGGCTTTCTCGTCTTGTTGGTTTTCTTTCGGAAATGACACAAAGCCCCTTCACAAGCCCTTGTGCACAAAAGCAAGCTAAAACAAGCTTCTTGCGGCCAGAAACTGTGAAATACAAATTCGAGGGCAAAATGGTAATTTTCCCGAAAGTATTCAAAAACCCTCTTCGCGGCAAAACTACTTCAGAACGCGTAGCTCATCGCAGACTGCCTACTTCGCGAGGCAATGCTTCATGA

Coding sequence (CDS)

ATGACTACTTTACTAACTTCTTTTGTGCAAGGTGGTTCTGTGAAAGTTGCTAAGTGTGGGGTATGCGGTCTAGTCGGACATCCGAATGACAAATGCCCAGACTTAATTGAGGAAGCAAATGTCATATGTAAGTACGATCCCCATAGTAATACTTACAATTCCGGTTGGAGAGACAACCCAAATCTAAGGATGGGAAATGACAACCAAAGACCTTCACAAGCAACTTCCTCTTCAAACAATCAAGGTACAAATTTAGAAGATTTAGTTAAAGCTCTTACTACTAATACCATCTCTTTTCAAAATGAAATAAAGCAACAAATGTCTCATTTGACAAACGCAATTAGCAAGCTAGAAGGTAAAGGCAAACTTCCGGCACAACCGGATCATGCAAACGTAAGTGTCATCTCACTGAGAAGCGGTAAAATTCTAGAAACCTCTCCAAGTGAAGAAAATGTAACTTCTAACCCTATCCTTCTTAATAATAATGATGAGACTAAGGAAGAAAAAGTAGAAACAAATGCTCTACCATCCAGTTCCAACAAAGTTCTTCACTTCTCATTCTTGCACTCAGCCGCCGAGCAGCACTCTTTCTCCCCAGTTCCCTTGCGTCGTGCGTTGTCTTCGCCGTTCGAAAGCTCTCCGGTCATCGTTTCGCTGGAAAGGAAGCTTTGGTCTTTGGTTTGGGCGTTCTGGGCTATTTTTGCAAAGTGTGGAGGCGCTTCGTGGCTTTCTCGTCTTGTTGGTTTTCTTTCGGAAATGACACAAAGCCCCTTCACAAGCCCTTGTGCACAAAAGCAAGCTAAAACAAGCTTCTTGCGGCCAGAAACTGTGAAATACAAATTCGAGGGCAAAATGGTAATTTTCCCGAAAGTATTCAAAAACCCTCTTCGCGGCAAAACTACTTCAGAACGCGTAGCTCATCGCAGACTGCCTACTTCGCGAGGCAATGCTTCATGA

Protein sequence

MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILETSPSEENVTSNPILLNNNDETKEEKVETNALPSSSNKVLHFSFLHSAAEQHSFSPVPLRRALSSPFESSPVIVSLERKLWSLVWAFWAIFAKCGGASWLSRLVGFLSEMTQSPFTSPCAQKQAKTSFLRPETVKYKFEGKMVIFPKVFKNPLRGKTTSERVAHRRLPTSRGNAS

Homology

[Close]

BLAST of PI0015288 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.9e-64
Identity = 128/179 (71.51%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 2   TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPN 61
           TTLLTSFVQG  +KV KCGVCGLVGH N+KCP++IE+ N++ +YDPHSNTYNSGWRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGKG 121
           LR GNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ E+KQQM+ LT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS 180
           KLPAQ DHANVS ISLRSGKIL+T +  E+ VTS P+ LN+ +E+KEEKVETN  PS+S
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNS 387

[Close]

BLAST of PI0015288 vs. ExPASy TrEMBL
Match: A0A5D3DCG3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold860G00100 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNP 60
           MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+ N++ KYDPH NTYNSGWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGK 120
           NLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ E+KQQM+ LT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS 180
           GKL AQPDHANVSVISLRS KIL+T +  E+ VTS P+ LN+ +E+KEEK ETN  PS+S
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

[Close]

BLAST of PI0015288 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 127/180 (70.56%), Postives = 154/180 (85.56%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP++IE+ N++ KYDP+ NTYNSGWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGK 120
           NLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ E+KQQM+ LT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS 180
           GKLPAQPD+ANVS ISLRSGKIL+T +  E+ VTS  + LN+ +E+KEEKVETN  PS+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

[Close]

BLAST of PI0015288 vs. ExPASy TrEMBL
Match: A0A1S4E3R2 (uncharacterized protein LOC107991910 OS=Cucumis melo OX=3656 GN=LOC107991910 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNP 60
           MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+ N++ KYDPH NTYNSGWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGK 120
           NLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ E+KQQM+ LT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS 180
           GKL AQPDHANVSVISLRS KIL+T +  E+ VTS P+ LN+ +E+KEEK ETN  PS+S
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

[Close]

BLAST of PI0015288 vs. ExPASy TrEMBL
Match: A0A5A7UAL2 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001750 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63
Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP++IE+ N++ KYDPH NTYN GWRDNP
Sbjct: 33  MTTLLTSFVQGTPLKVTKCGVCCLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNLGWRDNP 92

Query: 61  NLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGK 120
           NLR GNDNQ+ +QA  +S+NQGTNLED++KAL T T+SFQ E+KQQM+ LT AISK++ K
Sbjct: 93  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALITKTLSFQQEMKQQMTQLTTAISKMDVK 152

Query: 121 GKLPAQPDHANVSVISLRSGKILETSPS-EENVTSNPILLNNNDETKEEKVETNALPSSS 180
           GKLPAQPDHANVS ISLRSGKIL+TS + E+ VTS P+  N+ +E+KEEKVETN  PS+S
Sbjct: 153 GKLPAQPDHANVSAISLRSGKILDTSTTKEKKVTSKPLPFNSKNESKEEKVETNPSPSNS 212

[Close]

BLAST of PI0015288 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.1 bits (653), Expect = 3.9e-64
Identity = 128/179 (71.51%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 2   TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPN 61
           TTLLTSFVQG  +KV KCGVCGLVGH N+KCP++IE+ N++ +YDPHSNTYNSGWRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGKG 121
           LR GNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ E+KQQM+ LT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS 180
           KLPAQ DHANVS ISLRSGKIL+T +  E+ VTS P+ LN+ +E+KEEKVETN  PS+S
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNS 387

[Close]

BLAST of PI0015288 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-63
Identity = 127/180 (70.56%), Postives = 154/180 (85.56%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP++IE+ N++ KYDP+ NTYNSGWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGK 120
           NLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ E+KQQM+ LT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS 180
           GKLPAQPD+ANVS ISLRSGKIL+T +  E+ VTS  + LN+ +E+KEEKVETN  PS+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

[Close]

BLAST of PI0015288 vs. NCBI nr
Match: XP_016902871.1 (PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-63
Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNP 60
           MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+ N++ KYDPH NTYNSGWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGK 120
           NLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ E+KQQM+ LT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS 180
           GKL AQPDHANVSVISLRS KIL+T +  E+ VTS P+ LN+ +E+KEEK ETN  PS+S
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

[Close]

BLAST of PI0015288 vs. NCBI nr
Match: KAA0051761.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21361.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-63
Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNP 60
           MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+ N++ KYDPH NTYNSGWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGK 120
           NLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ E+KQQM+ LT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS 180
           GKL AQPDHANVSVISLRS KIL+T +  E+ VTS P+ LN+ +E+KEEK ETN  PS+S
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

[Close]

BLAST of PI0015288 vs. NCBI nr
Match: KAA0050529.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.1 bits (645), Expect = 3.3e-63
Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP++IE+ N++ KYDPH NTYN GWRDNP
Sbjct: 33  MTTLLTSFVQGTPLKVTKCGVCCLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNLGWRDNP 92

Query: 61  NLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHLTNAISKLEGK 120
           NLR GNDNQ+ +QA  +S+NQGTNLED++KAL T T+SFQ E+KQQM+ LT AISK++ K
Sbjct: 93  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALITKTLSFQQEMKQQMTQLTTAISKMDVK 152

Query: 121 GKLPAQPDHANVSVISLRSGKILETSPS-EENVTSNPILLNNNDETKEEKVETNALPSSS 180
           GKLPAQPDHANVS ISLRSGKIL+TS + E+ VTS P+  N+ +E+KEEKVETN  PS+S
Sbjct: 153 GKLPAQPDHANVSAISLRSGKILDTSTTKEKKVTSKPLPFNSKNESKEEKVETNPSPSNS 212

The following BLAST results are available for this feature:

BLAST of PI0015288 vs.


Match Name	E-value	Identity	Description

BLAST of PI0015288 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQ60	1.9e-64	71.51	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3DCG3	1.2e-63	70.56	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
E5GBZ4	1.2e-63	70.56	Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S4E3R2	1.2e-63	70.56	uncharacterized protein LOC107991910 OS=Cucumis melo OX=3656 GN=LOC107991910 PE=...	[more]
A0A5A7UAL2	1.6e-63	70.56	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of PI0015288 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067359.1	3.9e-64	71.51	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos...	[more]
ADN33993.1	2.5e-63	70.56	retrotransposon gag protein [Cucumis melo subsp. melo]	[more]
XP_016902871.1	2.5e-63	70.56	PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]	[more]
KAA0051761.1	2.5e-63	70.56	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21361.1 retrotranspos...	[more]
KAA0050529.1	3.3e-63	70.56	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0015288 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015288.1	PI0015288.1	mRNA