Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATATTGCAAGTCAATACCGCAGGAAGCTCTGTGCTCGCGGCTAATCAAATTGATGACATGGGATGTGTGGGATGCGGCGGTCATCATAACACTGATGCATGCCCACTCAATACTGAAACCGTCGCGTTCGTAAGGAACGACCCCTTTTCCAATACCTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGGCGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCACCTGGCTTCCACGCGAGGTACCAAAACAATAGACCCCAACAATCCCATCATCAACAGCATCCCACCACCACCGCCTCGTCCACCTCTCCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTGGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTTCCGAGCAATACAGAAATGCCAAATCAGGCGGGAGGATCTGGTAAAGAGAAGTGTCACGCGGTGACACTACGCAGTGGAAGAAATTTAACCATTCGCGACCCTGATGCTGAACGTAGCTACCCCAATTCTAACTCTACTGCCGAGATTGGCAGTTCAAGTAAAATTCCTAATCTTATAAATTTCCCTTCAACTGATAATGTTTCTTCCTCGCAGAATAA
mRNA sequence
ATGGCAATATTGCAAGTCAATACCGCAGGAAGCTCTGTGCTCGCGGCTAATCAAATTGATGACATGGGATGTGTGGGATGCGGCGGTCATCATAACACTGATGCATGCCCACTCAATACTGAAACCGTCGCGTTCGTAAGGAACGACCCCTTTTCCAATACCTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGGCGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCACCTGGCTTCCACGCGAGGTACCAAAACAATAGACCCCAACAATCCCATCATCAACAGCATCCCACCACCACCGCCTCGTCCACCTCTCCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTGGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTTCCGAGCAATACAGAAATGCCAAATCAGGCGGGAGGATCTGGTAAAGAGAAGTGTCACGCGGTGACACTACGCAGTGGAAGAAATTTAACCATTCGCGACCCTGATGCTGAACGTAGCTACCCCAATTCTAACTCTACTGCCGAGATTGGCAGTTCAAAATAA
Coding sequence (CDS)
ATGGCAATATTGCAAGTCAATACCGCAGGAAGCTCTGTGCTCGCGGCTAATCAAATTGATGACATGGGATGTGTGGGATGCGGCGGTCATCATAACACTGATGCATGCCCACTCAATACTGAAACCGTCGCGTTCGTAAGGAACGACCCCTTTTCCAATACCTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGGCGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCACCTGGCTTCCACGCGAGGTACCAAAACAATAGACCCCAACAATCCCATCATCAACAGCATCCCACCACCACCGCCTCGTCCACCTCTCCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTGGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTTCCGAGCAATACAGAAATGCCAAATCAGGCGGGAGGATCTGGTAAAGAGAAGTGTCACGCGGTGACACTACGCAGTGGAAGAAATTTAACCATTCGCGACCCTGATGCTGAACGTAGCTACCCCAATTCTAACTCTACTGCCGAGATTGGCAGTTCAAAATAA
Protein sequence
MAILQVNTAGSSVLAANQIDDMGCVGCGGHHNTDACPLNTETVAFVRNDPFSNTYNPGWRNHPNFGWGGSGQQQGRHGGQGDHRGEAPGFHARYQNNRPQQSHHQQHPTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPNSNSTAEIGSSK
Homology
BLAST of PI0015038 vs. ExPASy TrEMBL
Match:
A0A5D3D2S0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00800 PE=4 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 5.0e-29
Identity = 87/181 (48.07%), Postives = 106/181 (58.56%), Query Frame = 0
Query: 1 MAILQVNTAGSSVLAANQIDDMGCVGCGGHHNTDACPLNTETVAFVRNDPFSNTYNPGWR 60
MA+ QV+ G+ V A Q+D+M VGCG H TDAC LN E A+V++ P+SNTYN
Sbjct: 64 MALSQVDAVGNYVQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSNTYN---- 123
Query: 61 NHPNFGWGGSGQQQGRHGGQGDHRGEAPGFHARYQNNRPQQS--HHQQHPTTTASSTSPM 120
G++RGEAP H + +RP S HQQ T T SS S M
Sbjct: 124 -------------------AGNYRGEAPD-HRQRHYDRPHYSAPQHQQATTNTPSSFSSM 183
Query: 121 ENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAGGSGKE 180
LLR+YMQ+ DA +QSQ +SI NLE+ LGQLA DFSGR GSLPSN E+PN G K
Sbjct: 184 VALLRKYMQRKDAFMQSQTTSIINLEIHLGQLAKDFSGRPHGSLPSNIEVPNHNNGVHKN 220
BLAST of PI0015038 vs. ExPASy TrEMBL
Match:
A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 84/202 (41.58%), Postives = 120/202 (59.41%), Query Frame = 0
Query: 18 QIDDMGCVGCGGHHNTDACPLNTETVAFV-----RN-DPFSNTYNPGWRNHPNFGWGGSG 77
Q++D+ C C +H D CP N +V +V RN +P+SNTYNPGWR+HPNF W G G
Sbjct: 100 QVNDLICSFCSENHIYDXCPHNPASVFYVGHGNNRNFNPYSNTYNPGWRHHPNFSWXGQG 159
Query: 78 QQQGRHGGQGDHRGEAPGFHARYQNNRPQQSHHQQHPT-TTASSTSPMENLLREYMQKND 137
G + GQ + + PQQ ++Q+ T ++ S +EN+++EYM + D
Sbjct: 160 GSXGFNQGQSQQNKQPYVPPTQQYIPPPQQRYNQRTQTPPVQNNNSNLENMMKEYMARTD 219
Query: 138 ALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAGGSGKEKCHAVTLRSGRN 197
A++QSQA+S+RN E QLGQLA++ R QGS P +TE+P + GKE+C AVTLRSG
Sbjct: 220 AVIQSQAASMRNFETQLGQLANELKNRPQGSFPXHTELPKR---EGKEQCKAVTLRSGLA 279
Query: 198 LTIRD-PDAERSYPNSNSTAEI 212
P A+ P++ T +I
Sbjct: 280 YDEPTMPTADVQIPSTGPTVKI 298
BLAST of PI0015038 vs. ExPASy TrEMBL
Match:
A0A6J1BDW4 (uncharacterized protein LOC110426584 OS=Herrania umbratica OX=108875 GN=LOC110426584 PE=4 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26
Identity = 79/174 (45.40%), Postives = 102/174 (58.62%), Query Frame = 0
Query: 24 CVGCGGHHNTDACPLNTETVAFV------RNDPFSNTYNPGWRNHPNFGWGGSGQQQGRH 83
C CG H+ D CP N+E+V FV +N+P+SNTYNPGWRNHPNF W +
Sbjct: 56 CEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNFSWSNNA------ 115
Query: 84 GGQGDHRGEAPGFHARYQNNRPQQSHHQQHPTTTASSTSPMENLLREYMQKNDALLQSQA 143
G PGFH Q RPQ S + S +E LL +Y+ K DA++QSQ
Sbjct: 116 GPSNPKPIMPPGFH---QQARPQISEKK----------SQLEELLLQYISKTDAIIQSQG 175
Query: 144 SSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAGGSGKEKCHAVTLRSGRNL 192
+S+RNLE Q+GQLA+ + R QGSLPS+T Q GKE+C A+TLRSG+ +
Sbjct: 176 ASLRNLETQVGQLANSINNRPQGSLPSDT----QINPKGKEQCQAITLRSGKEI 206
BLAST of PI0015038 vs. ExPASy TrEMBL
Match:
A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 2.0e-25
Identity = 77/174 (44.25%), Postives = 99/174 (56.90%), Query Frame = 0
Query: 24 CVGCGGHHNTDACPLNTETVAFV------RNDPFSNTYNPGWRNHPNFGWGGSGQQQGRH 83
C CG H+ D CP N+E+V FV +N+P+SNTYNPGWRNHPNF W +
Sbjct: 313 CEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNFSWSNNA------ 372
Query: 84 GGQGDHRGEAPGFHARYQNNRPQQSHHQQHPTTTASSTSPMENLLREYMQKNDALLQSQA 143
G PGF Q RPQ S +E LL +Y+ K DA++QSQ
Sbjct: 373 GPSNPKPIMPPGFQ---QQARPQ----------IPEKKSQLEELLLQYISKTDAIIQSQG 432
Query: 144 SSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAGGSGKEKCHAVTLRSGRNL 192
+S+RNLE Q+GQLA+ + R QGSLPS+T Q GKE+C A+TLRSG+ +
Sbjct: 433 ASLRNLETQVGQLANSINNRPQGSLPSDT----QINPKGKEQCQAITLRSGKEI 463
BLAST of PI0015038 vs. ExPASy TrEMBL
Match:
A0A6J1AB81 (uncharacterized protein LOC110416390 OS=Herrania umbratica OX=108875 GN=LOC110416390 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 4.4e-25
Identity = 76/171 (44.44%), Postives = 98/171 (57.31%), Query Frame = 0
Query: 27 CGGHHNTDACPLNTETVAFV------RNDPFSNTYNPGWRNHPNFGWGGSGQQQGRHGGQ 86
CG H+ D CP N+E+V FV +N+P+SNTYNPGWRNHPNF W + G
Sbjct: 2 CGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNFSWSNNA------GPS 61
Query: 87 GDHRGEAPGFHARYQNNRPQQSHHQQHPTTTASSTSPMENLLREYMQKNDALLQSQASSI 146
PGF Q RPQ S +E LL +Y+ K DA++QSQ +S+
Sbjct: 62 NPKPIMPPGFQ---QQARPQ----------IPEKKSQLEELLLQYISKTDAIIQSQGASL 121
Query: 147 RNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAGGSGKEKCHAVTLRSGRNL 192
RNLE Q+GQLA+ + R QGSLPS+T Q GKE+C A+TLRSG+ +
Sbjct: 122 RNLETQVGQLANSINNRPQGSLPSDT----QINPKGKEQCQAITLRSGKEI 149
BLAST of PI0015038 vs. NCBI nr
Match:
XP_030498047.1 (uncharacterized protein LOC115713707 [Cannabis sativa])
HSP 1 Score: 153.7 bits (387), Expect = 1.8e-33
Identity = 96/198 (48.48%), Postives = 123/198 (62.12%), Query Frame = 0
Query: 3 ILQVNTAGSSV--LAANQIDDMGCVGCGGHHNTDACPLNTETVAFV-------RNDPFSN 62
IL+ G SV AA Q ++ CV CG H + CP N +V +V N+P+SN
Sbjct: 114 ILKNMNMGGSVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNFNRNNNPYSN 173
Query: 63 TYNPGWRNHPNFGWGGSGQQQGRHGGQGDHRGEAPGFHARYQNNRPQQSHHQQHPTTTAS 122
+YNP W++HPNF WGG G GQG + PGF Q RPQQSH Q S
Sbjct: 174 SYNPAWKHHPNFSWGGQGASSSGAQGQG-KQSFPPGFS---QQPRPQQSHQPQ-----GS 233
Query: 123 STSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAG 182
TS +E+L+R+YM KNDA++QSQA+S+RNLEVQLGQLA++ R QG+LPS+TE P +
Sbjct: 234 QTSSLESLMRDYMAKNDAVIQSQAASLRNLEVQLGQLANNLKNRPQGTLPSDTENPRR-- 293
Query: 183 GSGKEKCHAVTLRSGRNL 192
GKE C A+TLRSG+ L
Sbjct: 294 -DGKEHCKAITLRSGKIL 299
BLAST of PI0015038 vs. NCBI nr
Match:
XP_030509259.1 (uncharacterized protein LOC115723937 [Cannabis sativa])
HSP 1 Score: 150.6 bits (379), Expect = 1.5e-32
Identity = 96/197 (48.73%), Postives = 121/197 (61.42%), Query Frame = 0
Query: 3 ILQVNTAGSSV--LAANQIDDMGCVGCGGHHNTDACPLNTETVAFV-------RNDPFSN 62
IL+ G SV AA Q ++ CV CG H + CP N +V +V N+P+SN
Sbjct: 274 ILKNMNMGGSVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNFNRNNNPYSN 333
Query: 63 TYNPGWRNHPNFGWGGSG-QQQGRHGGQGDHRGEAPGFHARYQNNRPQQSHHQQHPTTTA 122
+YNP W++HPNF WGG G G QG + PGF Q RPQQ H Q
Sbjct: 334 SYNPAWKHHPNFSWGGQGASSSGAQQAQG-KQSFPPGFS---QQPRPQQPHQPQ-----G 393
Query: 123 SSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQA 182
S TS +E+L+R+YM KNDA++QSQA+S+RNLEVQLGQLA+D R QG+LPS+TE P +
Sbjct: 394 SQTSSLESLMRDYMAKNDAVIQSQAASLRNLEVQLGQLANDLKNRPQGTLPSDTENPRR- 453
Query: 183 GGSGKEKCHAVTLRSGR 190
GKE C AVTLRSG+
Sbjct: 454 --DGKEHCKAVTLRSGK 458
BLAST of PI0015038 vs. NCBI nr
Match:
XP_038902511.1 (uncharacterized protein LOC120089170 [Benincasa hispida])
HSP 1 Score: 148.3 bits (373), Expect = 7.7e-32
Identity = 77/167 (46.11%), Postives = 115/167 (68.86%), Query Frame = 0
Query: 18 QIDDMGCVGCGGHHNTDACPLNTETVAFVRNDPFSNTYNPGWRNHPNFGWGGSGQQQGRH 77
Q+ + C CG H+ + CP N + V ++N+P++NTYNPGWRNHPNF WGG+ Q G+
Sbjct: 231 QVAVISCAQCGEGHSVEMCPSNPQAVYSIQNNPYNNTYNPGWRNHPNFNWGGNNDQGGQR 290
Query: 78 GGQ--GDHRGEAPGFH--ARYQNNRPQQSHHQQHPTTTASSTSPMENLLREYMQKNDALL 137
Q ++RG P FH +++ +QSH+Q + ++++S +E LL++Y++KNDA++
Sbjct: 291 NLQNNSENRGNPPVFHQGLNQSHHQSRQSHNQPSSSNFSTNSSSLEALLKQYIEKNDAVM 350
Query: 138 QSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAGGSGKEKC 181
QSQASSIRNLEVQ+GQLA++ R G +PSN+E P G +GKE+C
Sbjct: 351 QSQASSIRNLEVQMGQLAAELRNRALGMMPSNSEAP---GSNGKEQC 394
BLAST of PI0015038 vs. NCBI nr
Match:
XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])
HSP 1 Score: 148.3 bits (373), Expect = 7.7e-32
Identity = 93/196 (47.45%), Postives = 116/196 (59.18%), Query Frame = 0
Query: 3 ILQVNTAGSSV--LAANQIDDMGCVGCGGHHNTDACPLNTETVAFV-------RNDPFSN 62
IL+ G SV AA Q CV CG H + CP N +V +V N+P+SN
Sbjct: 266 ILKNMNMGGSVQPAAAIQRAKNSCVYCGDGHTFENCPSNLASVCYVGNQNFNRNNNPYSN 325
Query: 63 TYNPGWRNHPNFGWGGSGQQQGRHGGQGDHRGEAPGFHARYQNNRPQQSHHQQHPTTTAS 122
+YNP W++HPNF WGG G+Q PGF Q RPQQ H Q S
Sbjct: 326 SYNPAWKHHPNFSWGGQGKQ-----------SFPPGFS---QQPRPQQPHQPQ-----GS 385
Query: 123 STSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQAG 182
TS +E+L+R+YM KND ++QSQA+S+RNLEVQLGQLA+D R QG+LPS+TE P +
Sbjct: 386 QTSSLESLMRDYMAKNDTVIQSQAASLRNLEVQLGQLANDLKNRPQGTLPSDTENPRR-- 439
Query: 183 GSGKEKCHAVTLRSGR 190
GKE C AVTLRSG+
Sbjct: 446 -DGKEHCKAVTLRSGK 439
BLAST of PI0015038 vs. NCBI nr
Match:
XP_030507648.1 (uncharacterized protein LOC115722545 [Cannabis sativa])
HSP 1 Score: 146.4 bits (368), Expect = 2.9e-31
Identity = 91/199 (45.73%), Postives = 122/199 (61.31%), Query Frame = 0
Query: 3 ILQVNTAGSSV--LAANQIDDMGCVGCGGHHNTDACPLNTETVAFV-------RNDPFSN 62
IL+ G SV AA Q ++ CV CG H + CP N +V +V N+P+SN
Sbjct: 208 ILKNMNMGGSVQPAAAIQRAEISCVYCGDGHTFENCPSNLASVCYVGNQNFNRNNNPYSN 267
Query: 63 TYNPGWRNHPNFGWGGSG-QQQGRHGGQGDHRGEAPGFHARYQNNRPQQSHHQQHPTTTA 122
+YNP W++HPNF WGG G G QG + PGF + ++++PQ
Sbjct: 268 SYNPAWKHHPNFSWGGQGASSSGAQQAQG-KQSFPPGFSQQPRSHQPQ-----------G 327
Query: 123 SSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTEMPNQA 182
S TS +E+L+R+YM KNDA++QSQA+S+RNLEVQLGQLA+D R QG+LPS+TE P +
Sbjct: 328 SQTSSLESLMRDYMAKNDAVIQSQAASLRNLEVQLGQLANDLKNRPQGTLPSDTENPRR- 387
Query: 183 GGSGKEKCHAVTLRSGRNL 192
GKE C A+TLRSG+ L
Sbjct: 388 --DGKEHCKAITLRSGKIL 391
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3D2S0 | 5.0e-29 | 48.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1DYG0 | 2.1e-27 | 41.58 | uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1BDW4 | 1.8e-26 | 45.40 | uncharacterized protein LOC110426584 OS=Herrania umbratica OX=108875 GN=LOC11042... | [more] |
A0A6J0ZX64 | 2.0e-25 | 44.25 | LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... | [more] |
A0A6J1AB81 | 4.4e-25 | 44.44 | uncharacterized protein LOC110416390 OS=Herrania umbratica OX=108875 GN=LOC11041... | [more] |
Match Name | E-value | Identity | Description | |