PI0014979 (gene) Melon (PI 482460) v1

Overview


Name	PI0014979
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Location	chr01: 23590393 .. 23590881 (+)
RNA-Seq Expression	PI0014979
Synteny	PI0014979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCGAGCTTCCGGAATACCTTTGGATCTTCGTAAAGTTGATCGTTATGAGTGTTATGACGAATTTGATTGGGAAGTTCAGTGGCAAAAAGAAGGCGATTCATTAGCTCGTTATTTAGTCAGACTTGCTGAGATGACGGAATCTGTAAAAATTATTCAACAAGCTTTGGAAGGAATTCCTGGGGGACCTTATGAAAATTTAGAAATACGATCTTTTGATCGAGCAAGGTCTCCGGAATGGAATGACTTTGACTATCGATTCATTAGTAAAAAACCTTCGCCAACTTTTGAATTGGCGAAACAAGAACTTTATGTGAGAGTCGAAGCCCCCAAAGGAGAATTAGGCATTTTTTTGATCGGGGATCAGGGTGGTTTTCCTTGGAGATGGAAAATTCGCCTGCCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAGTTAAAAGAATGATGATAAGTAAATTGTTGAATGAATTAGAAAACAATTAA

mRNA sequence

ATGCTGCGAGCTTCCGGAATACCTTTGGATCTTCGTAAAGTTGATCGTTATGAGTGTTATGACGAATTTGATTGGGAAGTTCAGTGGCAAAAAGAAGGCGATTCATTAGCTCGTTATTTAGTCAGACTTGCTGAGATGACGGAATCTGTAAAAATTATTCAACAAGCTTTGGAAGGAATTCCTGGGGGACCTTATGAAAATTTAGAAATACGATCTTTTGATCGAGCAAGGTCTCCGGAATGGAATGACTTTGACTATCGATTCATTAAACTTTATGTGAGAGTCGAAGCCCCCAAAGGAGAATTAGGCATTTTTTTGATCGGGGATCAGGGTGGTTTTCCTTGGAGATGGAAAATTCGCCTGCCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAGTTAAAAGAATGATGATAAGTAAATTGTTGAATGAATTAGAAAACAATTAA

Coding sequence (CDS)

ATGCTGCGAGCTTCCGGAATACCTTTGGATCTTCGTAAAGTTGATCGTTATGAGTGTTATGACGAATTTGATTGGGAAGTTCAGTGGCAAAAAGAAGGCGATTCATTAGCTCGTTATTTAGTCAGACTTGCTGAGATGACGGAATCTGTAAAAATTATTCAACAAGCTTTGGAAGGAATTCCTGGGGGACCTTATGAAAATTTAGAAATACGATCTTTTGATCGAGCAAGGTCTCCGGAATGGAATGACTTTGACTATCGATTCATTAAACTTTATGTGAGAGTCGAAGCCCCCAAAGGAGAATTAGGCATTTTTTTGATCGGGGATCAGGGTGGTTTTCCTTGGAGATGGAAAATTCGCCTGCCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAGTTAAAAGAATGATGATAAGTAAATTGTTGAATGAATTAGAAAACAATTAA

Protein sequence

MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFIKLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNELENN

Homology

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BLAST of PI0014979 vs. ExPASy Swiss-Prot
Match: Q4VZL2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhH PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-73
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDRARSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRARSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

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BLAST of PI0014979 vs. ExPASy Swiss-Prot
Match: Q09WW2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Morus indica OX=248361 GN=ndhH PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.7e-69
Identity = 126/159 (79.25%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGI  DLRKVD YECYDEFDWEVQWQKEGDSLARYLVR+ EMTES+KIIQQALEGI
Sbjct: 223 MLRASGIQWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESIKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIR FDR R+PEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRYFDRERNPEWNDFDYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQ GFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. ExPASy Swiss-Prot
Match: B1A990 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Carica papaya OX=3649 GN=ndhH PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 9.6e-69
Identity = 125/159 (78.62%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGI  DLRKVD YECYDEFDWEVQWQKEGDSLARYLVR++EMTES+KIIQQALEGI
Sbjct: 223 MLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRISEMTESIKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIR FDR + PEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRCFDRKKDPEWNDFDYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQ GFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

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BLAST of PI0014979 vs. ExPASy Swiss-Prot
Match: A4QLG5 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lepidium virginicum OX=59292 GN=ndhH PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 3.7e-68
Identity = 123/159 (77.36%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYE YDEF+WE+QWQK+GDSLARYLVRL+EMTES+KIIQQALEG+
Sbjct: 223 MLRASGIPWDLRKVDRYESYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGL 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLE RSFDR R+PEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLESRSFDRKRNPEWNDFDYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQ GFPWRWKIR PGFINLQILP+LVKRM ++ ++  L
Sbjct: 343 GDQSGFPWRWKIRPPGFINLQILPELVKRMKLADIMTIL 381

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BLAST of PI0014979 vs. ExPASy Swiss-Prot
Match: A0ZZ91 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Gossypium barbadense OX=3634 GN=ndhH PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.1e-67
Identity = 122/159 (76.73%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGI  DLRKVD YECYDEFDWE+QWQKEGDSLARYLVR++EMTES+KIIQQALEGI
Sbjct: 223 MLRASGIKWDLRKVDHYECYDEFDWEIQWQKEGDSLARYLVRISEMTESIKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIR FDR R PEWNDF+YRFI             +LY R+EAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRCFDRERDPEWNDFEYRFISIKPSPTFELPRQELYARMEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQ GFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

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BLAST of PI0014979 vs. ExPASy TrEMBL
Match: A0A218KGA7 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhH PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.8e-71
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDRARSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRARSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. ExPASy TrEMBL
Match: G3ETV5 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=ndhH PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.8e-71
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDRARSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRARSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. ExPASy TrEMBL
Match: A0A1X9Q1R4 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhH PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.8e-71
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDRARSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRARSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. ExPASy TrEMBL
Match: A0A1S4EU61 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo OX=3656 GN=ndhH PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.8e-71
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDRARSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRARSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. ExPASy TrEMBL
Match: A0A249RZD9 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhH PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.8e-71
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDRARSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRARSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. NCBI nr
Match: YP_004841841.1 (NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. melo] >YP_009004097.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis hystrix] >YP_009346532.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis x hytivus] >YP_009860131.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. agrestis] >YP_247656.1 NADH dehydrogenase subunit 7 [Cucumis sativus] >Q4VZL2.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit H; AltName: Full=NADH-plastoquinone oxidoreductase 49 kDa subunit; AltName: Full=NADH-plastoquinone oxidoreductase subunit H [Cucumis sativus] >ALF03357.1 NADH dehydrogenase subunit 7 [Cucumis sativus var. hardwickii] >ASY96641.1 NADH dehydrogenase subunit 7 [Cucumis melo var. conomon] >ASY96729.1 NADH dehydrogenase subunit 7 [Cucumis melo var. makuwa] >ASY96816.1 NADH dehydrogenase subunit 7 [Cucumis melo var. momordica] >ASY96903.1 NADH dehydrogenase subunit 7 [Cucumis melo var. dudaim] >ASY96990.1 NADH dehydrogenase subunit 7 [Cucumis melo var. cantalupo] >ASY97164.1 NADH dehydrogenase subunit 7 [Cucumis melo var. inodorus] >ASY97338.1 NADH dehydrogenase subunit 7 [Cucumis melo var. flexuosus] >AVE15388.1 NdhH [Cucumis sativus var. sativus] >MBC9855763.1 hypothetical protein [Adiantum capillus-veneris] >QJF46442.1 NADH dehydrogenase subunit 7 [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 9.9e-71
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDRARSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRARSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. NCBI nr
Match: TYK19320.1 (NADH dehydrogenase subunit 7 [Cucumis melo var. makuwa])

HSP 1 Score: 276.9 bits (707), Expect = 9.9e-71
Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 209 MLRASGIPWDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 268

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDRARSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 269 PGGPYENLEIRSFDRARSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 328

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 329 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 367

[Close]

BLAST of PI0014979 vs. NCBI nr
Match: YP_009420851.1 (NADH dehydrogenase subunit 7 [Citrullus colocynthis] >YP_009431699.1 NADH dehydrogenase subunit 7 [Citrullus rehmii] >YP_009456203.1 NADH dehydrogenase subunit 7 [Lagenaria siceraria] >QNM38588.1 NADH-plastoquinone oxidoreductase subunit 7 [Lagenaria siceraria var. microcarpa] >QZL38651.1 NADH dehydrogenase subunit H [Citrullus naudinianus] >ASP44514.1 NADH dehydrogenase subunit 7 [Citrullus colocynthis] >ASY96295.1 NADH dehydrogenase subunit 7 [Citrullus rehmii] >AUJ21968.1 NADH dehydrogenase subunit 7 [Lagenaria siceraria])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 133/159 (83.65%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVD YECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDR RSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. NCBI nr
Match: YP_009326046.1 (NADH dehydrogenase subunit 7 [Citrullus lanatus] >YP_009348088.1 NADH dehydrogenase subunit 7 [Citrullus mucosospermus] >YP_009431613.1 NADH dehydrogenase subunit 7 [Citrullus amarus] >APW82519.1 NADH dehydrogenase subunit 7 [Citrullus lanatus subsp. vulgaris] >QZL38740.1 NADH dehydrogenase subunit H [Citrullus ecirrhosus] >APD52538.1 NADH dehydrogenase subunit 7 [Citrullus lanatus] >APW82604.1 NADH dehydrogenase subunit 7 [Citrullus lanatus subsp. vulgaris] >APW82689.1 NADH dehydrogenase subunit 7 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 133/159 (83.65%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRKVD YECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDR RSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. NCBI nr
Match: YP_009317442.1 (NADH dehydrogenase subunit 7 [Coccinia grandis] >AOX48740.1 NADH dehydrogenase subunit 7 [Coccinia grandis] >AOX48825.1 NADH dehydrogenase subunit 7 [Coccinia grandis])

HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69
Identity = 132/159 (83.02%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRK+D YECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI
Sbjct: 223 MLRASGIPWDLRKIDHYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLEIRSFDR RSPEWNDFDYRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Sbjct: 343 GDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H )

HSP 1 Score: 255.4 bits (651), Expect = 2.9e-68
Identity = 120/159 (75.47%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLRASGIP DLRK+DRYE YDEF+WE+QWQK+GDSLARYLVRL+EMTES+KIIQQALEG+
Sbjct: 223 MLRASGIPWDLRKIDRYESYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGL 282

Query: 61  PGGPYENLEIRSFDRARSPEWNDFDYRFI-------------KLYVRVEAPKGELGIFLI 120
           PGGPYENLE R FDR R+PEWNDF+YRFI             +LYVRVEAPKGELGIFLI
Sbjct: 283 PGGPYENLESRGFDRKRNPEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLI 342

Query: 121 GDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL 147
           GDQ GFPWRWKIR PGFINLQILP+LVKRM ++ ++  L
Sbjct: 343 GDQSGFPWRWKIRPPGFINLQILPELVKRMKLADIMTIL 381

[Close]

BLAST of PI0014979 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 51/157 (32.48%), Postives = 71/157 (45.22%), Query Frame = 0


Query: 1   MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGI 60
           MLR  G+  D R+   Y+ +D+ D +V     GD   RY +R+ EM +S++II Q L  +
Sbjct: 223 MLRGPGVCWDSRRAAPYDVHDQSDLDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCLNQM 282

Query: 61  PGGPYENLEIRSFDRARSPE-------------------WNDFDYRFIKLYVRVEAPKGE 120
           P G      I++ DR   P                       F       Y  VEAPKGE
Sbjct: 283 PSG-----MIKADDRKLCPPSRCRMKLSMESSIHHFELYTEGFSVPASSTYTAVEAPKGE 342

Query: 121 LGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMM 139
            G+FL+ +    P+R KIR PG  + Q L  + K  M
Sbjct: 343 FGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHM 374

The following BLAST results are available for this feature:

BLAST of PI0014979 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZL2	1.3e-73	84.91	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q09WW2	5.7e-69	79.25	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Morus indica OX=24836...	[more]
B1A990	9.6e-69	78.62	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Carica papaya OX=3649...	[more]
A4QLG5	3.7e-68	77.36	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lepidium virginicum O...	[more]
A0ZZ91	1.1e-67	76.73	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Gossypium barbadense ...	[more]

BLAST of PI0014979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KGA7	4.8e-71	84.91	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus var. ...	[more]
G3ETV5	4.8e-71	84.91	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo subsp. m...	[more]
A0A1X9Q1R4	4.8e-71	84.91	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A1S4EU61	4.8e-71	84.91	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A249RZD9	4.8e-71	84.91	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo var. can...	[more]

BLAST of PI0014979 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841841.1	9.9e-71	84.91	NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. melo] >YP_00900...	[more]
TYK19320.1	9.9e-71	84.91	NADH dehydrogenase subunit 7 [Cucumis melo var. makuwa]	[more]
YP_009420851.1	1.1e-69	83.65	NADH dehydrogenase subunit 7 [Citrullus colocynthis] >YP_009431699.1 NADH dehydr...	[more]
YP_009326046.1	1.1e-69	83.65	NADH dehydrogenase subunit 7 [Citrullus lanatus] >YP_009348088.1 NADH dehydrogen...	[more]
YP_009317442.1	1.4e-69	83.02	NADH dehydrogenase subunit 7 [Coccinia grandis] >AOX48740.1 NADH dehydrogenase s...	[more]

BLAST of PI0014979 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01110.1	2.9e-68	75.47	NAD(P)H dehydrogenase subunit H	[more]
ATMG00510.1	1.7e-15	32.48	NADH dehydrogenase subunit 7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001135	NADH-quinone oxidoreductase, subunit D	PFAM	PF00346	Complex1_49kDa	coord: 1..141 e-value: 2.7E-40 score: 138.2
IPR029014	[NiFe]-hydrogenase, large subunit	GENE3D	1.10.645.10		coord: 1..146 e-value: 1.4E-41 score: 144.5
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	56762	HydB/Nqo4-like	coord: 1..141
IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 1..143
None	No IPR available	PANTHER	PTHR11993:SF39	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT H, CHLOROPLASTIC	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014979.1	PI0014979.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0050136	NADH dehydrogenase (quinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H