PI0014935 (gene) Melon (PI 482460) v1

Overview


Name	PI0014935
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	60S ribosomal protein L18
Location	chr05: 22198513 .. 22199817 (+)
RNA-Seq Expression	PI0014935
Synteny	PI0014935

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCTGAATATGAGTTTCAAAAAAACCCATTTGTTAGTGTTGGGCTTGAAGAACCCGGAAACCCAATGGGTATTTTCTCTTGAAAGTGCACCTGATCGGCTGACCCTTATTCCCTCCCTTCTTCCTTTTTATCTCTTTTGTCCCTCCTGCTTTCTCGCGTTTCTCTTCCGGCCACCGCACGCTGCCGCTTCGATCCACCTTCCTTCGACGCCGCCCTCGTCAAAATCACTTTACTGGAGAAGCCTCGCGGTGATTTTGCGCGGTCTGCTACCTCAACGCCGCGTTAAACCACCGTTTCGACGCTGCTAATTTAAGCGAGTTTTAGGGGCGATCTTGTTCAAGGGCTGTTAAGGTAACTCCGTTAGTTCATTGTTAAAATTGCTTTTGAAGTAAGTGGCATTACCAATGGAAAGCCTTTGGCTTGGTTGGACACTTTTTTTTTTTTTGGCGGTGTGTTCTGAGTTGTGCCGTGAACATTGAATTTGTTTAATATGTGTATTTTGAATTTTGATAAAATGGGGTGGTTGTGTGAATTATTTTACTTGGAGGTAAAGGACGAGTGTTCTGAACTATGTGCTATGAGTGTTGAATTTGTTGATATGTGATCTGATTATGTGGCGTGGATGTTAGATTTGGTGGATGTCTGAATTACATTACTTGTTTGTGGTTTGAACATCTCGAGGTACATGTATGTAGATGAGACTTTTGTTTAGGTTATAAGTACATGATAACCGGCGGCGGCGGCTGCTAAACTTGGCATAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGACTGCACCCAAATCTGATGATATCTACCTAAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTCCGTCAGACTGGAAGCAATTTCGATGCTGTGATTCTCTAGCGCCTGTTAATAGGCAAGGTTAACAAGCCTCCACTTTCGATCTCTAGGCTATCCAGTCCATGAAAGGAAAGGAAAGGAAAGTAAGATTTCTTTTGTTGGGAAAATTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGTTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGAAATTTGACCAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGGTTCCTCTTAGAGGTCCTAAGAACTACCAAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTATCACACAGCCATTCCAAGCCATATGTGAGGTCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATGGGGTTTGA

mRNA sequence

ATGTGGCTGAATATGAGTTTCAAAAAAACCCATTTGTTAGTGTTGGGCTTGAAGAACCCGGAAACCCAATGGGTATTTTCTCTTGAAAGTGCACCTGATCGGCTGACCCTTATTCCCTCCCTTCTTCCTTTTTATCTCTTTTGTCCCTCCTGCTTTCTCGCGTTTCTCTTCCGGCCACCGCACGCTGCCGCTTCGATCCACCTTCCTTCGACGCCGCCCTCGTCAAAATCACTTTACTGGAGAAGCCTCGCGGTGATTTTGCGCGGCTATCCAGTCCATGAAAGGAAAGGAAAGGAAAGTAAGATTTCTTTTGTTGGGAAAATTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGTTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGAAATTTGACCAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGGTTCCTCTTAGAGGTCCTAAGAACTACCAAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTATCACACAGCCATTCCAAGCCATATGTGAGGTCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATGGGGTTTGA

Coding sequence (CDS)

ATGTGGCTGAATATGAGTTTCAAAAAAACCCATTTGTTAGTGTTGGGCTTGAAGAACCCGGAAACCCAATGGGTATTTTCTCTTGAAAGTGCACCTGATCGGCTGACCCTTATTCCCTCCCTTCTTCCTTTTTATCTCTTTTGTCCCTCCTGCTTTCTCGCGTTTCTCTTCCGGCCACCGCACGCTGCCGCTTCGATCCACCTTCCTTCGACGCCGCCCTCGTCAAAATCACTTTACTGGAGAAGCCTCGCGGTGATTTTGCGCGGCTATCCAGTCCATGAAAGGAAAGGAAAGGAAAGTAAGATTTCTTTTGTTGGGAAAATTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGTTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGAAATTTGACCAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGGTTCCTCTTAGAGGTCCTAAGAACTACCAAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTATCACACAGCCATTCCAAGCCATATGTGAGGTCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATGGGGTTTGA

Protein sequence

MWLNMSFKKTHLLVLGLKNPETQWVFSLESAPDRLTLIPSLLPFYLFCPSCFLAFLFRPPHAAASIHLPSTPPSSKSLYWRSLAVILRGYPVHERKGKESKISFVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV

Homology

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BLAST of PI0014935 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-40
Identity = 86/115 (74.78%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 97  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLG 156
           GKE KI+  VG I D++R+ E+PA+K  ALRFT+ AR+RIEKAG ECL FDQLALRA LG
Sbjct: 73  GKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLG 132

Query: 157 QNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           QNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVR+KGRKFE+ARGKR SRG+ V
Sbjct: 133 QNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187

[Close]

BLAST of PI0014935 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.5e-39
Identity = 83/115 (72.17%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 97  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLG 156
           GK+ KI+  VG I D++R+ E+PA+K  ALRFT+ AR+RIEKAG ECL FDQLALRA LG
Sbjct: 73  GKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLG 132

Query: 157 QNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           QNTV LRGPKN +EAVKHFGPAPGV HS++KPYVR KGRKFE+ARGKR SRG+ V
Sbjct: 133 QNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 187

[Close]

BLAST of PI0014935 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35
Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHL 155
           +GKE KI   VG + D+IR+ +VP +K  AL+FT+TAR+RI+KAG ECL FDQLALR  L
Sbjct: 69  QGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL 128

Query: 156 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
             +TV LRGPKN +EAVKHFGPAPGV HSH+KPYVRSKGRKFE+ARG+R SRG+ V
Sbjct: 129 -TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFRV 183

[Close]

BLAST of PI0014935 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 97  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL- 156
           GK+ KI+  VG + D++RI +VPAL   ALRFT++AR+RI KAG ECL FDQLAL     
Sbjct: 73  GKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTW 132

Query: 157 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
            +NTV LRGPKN +EAVKHFGPAPGV HSH+KPYVR  G+K E ARG+R SRG+ V
Sbjct: 133 SENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV 188

[Close]

BLAST of PI0014935 vs. ExPASy Swiss-Prot
Match: Q4PM04 (60S ribosomal protein L18 OS=Ixodes scapularis OX=6945 GN=RpL18 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30
Identity = 68/116 (58.62%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 94  ERKGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRA 153
           ++ G+E+ I+  VG + D++R+ +VP L+  ALR T+ AR+RI KAG E L FDQLA++A
Sbjct: 71  KKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGEILTFDQLAVQA 130

Query: 154 HLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGY 207
             G+ TV ++GP+N +EA +HFGPAPGV HSH+KPYVRSKGRKFERARG+R SR Y
Sbjct: 131 PKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGRKFERARGRRKSRRY 186

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BLAST of PI0014935 vs. ExPASy TrEMBL
Match: A0A5A7TD77 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00400 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 8.0e-48
Identity = 100/114 (87.72%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQ 155
           KGKES+IS  VG +ADEIRICEVPALKALR TQTARSRIEKAGWECL FDQLA RAHLGQ
Sbjct: 2   KGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQ 61

Query: 156 NTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           NTV LRGPKN QEA+KHFGPAP VSHSHS+PYVRSKGR FERARGKRNSRGYGV
Sbjct: 62  NTVLLRGPKNSQEALKHFGPAPAVSHSHSEPYVRSKGRNFERARGKRNSRGYGV 115

[Close]

BLAST of PI0014935 vs. ExPASy TrEMBL
Match: A0A5D3BA35 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001230 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.7e-46
Identity = 98/114 (85.96%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQ 155
           KGKES+IS  VG +ADEIRICEVPALKALR TQTARSRIEKAGWECL FDQLA RAHLGQ
Sbjct: 2   KGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQ 61

Query: 156 NTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           NTV LRGPKN QEA+K FGPAP VSHSHS+PYVRS GR FERARGKRNSRGYGV
Sbjct: 62  NTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRNFERARGKRNSRGYGV 115

[Close]

BLAST of PI0014935 vs. ExPASy TrEMBL
Match: A0A5A7U942 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004150 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.0e-42
Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHL 155
           KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA L
Sbjct: 72  KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL 131

Query: 156 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           GQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGRKFERARGKRNSRGY V
Sbjct: 132 GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 187

[Close]

BLAST of PI0014935 vs. ExPASy TrEMBL
Match: A0A0A0LWD1 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569250 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.0e-42
Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHL 155
           KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA L
Sbjct: 129 KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL 188

Query: 156 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           GQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGRKFERARGKRNSRGY V
Sbjct: 189 GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 244

[Close]

BLAST of PI0014935 vs. ExPASy TrEMBL
Match: A0A1S3BPL9 (60S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.0e-42
Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHL 155
           KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA L
Sbjct: 72  KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL 131

Query: 156 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           GQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGRKFERARGKRNSRGY V
Sbjct: 132 GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 187

[Close]

BLAST of PI0014935 vs. NCBI nr
Match: KAA0041394.1 (60S ribosomal protein L18-2 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-47
Identity = 100/114 (87.72%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQ 155
           KGKES+IS  VG +ADEIRICEVPALKALR TQTARSRIEKAGWECL FDQLA RAHLGQ
Sbjct: 2   KGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQ 61

Query: 156 NTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           NTV LRGPKN QEA+KHFGPAP VSHSHS+PYVRSKGR FERARGKRNSRGYGV
Sbjct: 62  NTVLLRGPKNSQEALKHFGPAPAVSHSHSEPYVRSKGRNFERARGKRNSRGYGV 115

[Close]

BLAST of PI0014935 vs. NCBI nr
Match: TYJ96153.1 (60S ribosomal protein L18-2 [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-45
Identity = 98/114 (85.96%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQ 155
           KGKES+IS  VG +ADEIRICEVPALKALR TQTARSRIEKAGWECL FDQLA RAHLGQ
Sbjct: 2   KGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQ 61

Query: 156 NTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           NTV LRGPKN QEA+K FGPAP VSHSHS+PYVRS GR FERARGKRNSRGYGV
Sbjct: 62  NTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRNFERARGKRNSRGYGV 115

[Close]

BLAST of PI0014935 vs. NCBI nr
Match: XP_011659839.1 (60S ribosomal protein L18-2 [Cucumis sativus] >KAE8653364.1 hypothetical protein Csa_007522 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-41
Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHL 155
           KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA L
Sbjct: 72  KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL 131

Query: 156 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           GQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGRKFERARGKRNSRGY V
Sbjct: 132 GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 187

[Close]

BLAST of PI0014935 vs. NCBI nr
Match: XP_008450608.1 (PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa] >TYK10265.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-41
Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHL 155
           KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA L
Sbjct: 72  KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL 131

Query: 156 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           GQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGRKFERARGKRNSRGY V
Sbjct: 132 GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 187

[Close]

BLAST of PI0014935 vs. NCBI nr
Match: XP_038887726.1 (60S ribosomal protein L18-2-like [Benincasa hispida])

HSP 1 Score: 179.1 bits (453), Expect = 3.9e-41
Identity = 95/116 (81.90%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 96  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHL 155
           KGKESKI+  VG I D+ R+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA L
Sbjct: 72  KGKESKIAVVVGTITDDTRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL 131

Query: 156 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           GQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGRKFERARGKRNSRGY V
Sbjct: 132 GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV 187

[Close]

BLAST of PI0014935 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 86/115 (74.78%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 97  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLG 156
           GKE KI+  VG I D++R+ E+PA+K  ALRFT+ AR+RIEKAG ECL FDQLALRA LG
Sbjct: 73  GKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLG 132

Query: 157 QNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           QNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVR+KGRKFE+ARGKR SRG+ V
Sbjct: 133 QNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187

[Close]

BLAST of PI0014935 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 161.8 bits (408), Expect = 6.0e-40
Identity = 83/115 (72.17%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 97  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLG 156
           GK+ KI+  VG I D++R+ E+PA+K  ALRFT+ AR+RIEKAG ECL FDQLALRA LG
Sbjct: 73  GKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLG 132

Query: 157 QNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
           QNTV LRGPKN +EAVKHFGPAPGV HS++KPYVR KGRKFE+ARGKR SRG+ V
Sbjct: 133 QNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 187

[Close]

BLAST of PI0014935 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 7.2e-33
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 97  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL- 156
           GK+ KI+  VG + D++RI +VPAL   ALRFT++AR+RI KAG ECL FDQLAL     
Sbjct: 20  GKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTW 79

Query: 157 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
            +NTV LRGPKN +EAVKHFGPAPGV HSH+KPYVR  G+K E ARG+R SRG+ V
Sbjct: 80  SENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV 135

[Close]

BLAST of PI0014935 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 7.2e-33
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 97  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL- 156
           GK+ KI+  VG + D++RI +VPAL   ALRFT++AR+RI KAG ECL FDQLAL     
Sbjct: 20  GKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTW 79

Query: 157 GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV 209
            +NTV LRGPKN +EAVKHFGPAPGV HSH+KPYVR  G+K E ARG+R SRG+ V
Sbjct: 80  SENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV 135

The following BLAST results are available for this feature:

BLAST of PI0014935 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42791	1.6e-40	74.78	60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2	[more]
Q940B0	8.5e-39	72.17	60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1	[more]
O65729	1.5e-35	68.10	60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV...	[more]
O22254	1.0e-31	63.79	Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A P...	[more]
Q4PM04	3.2e-30	58.62	60S ribosomal protein L18 OS=Ixodes scapularis OX=6945 GN=RpL18 PE=2 SV=1	[more]

BLAST of PI0014935 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TD77	8.0e-48	87.72	60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3BA35	5.7e-46	85.96	60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7U942	5.0e-42	82.76	60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0LWD1	5.0e-42	82.76	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A1S3BPL9	5.0e-42	82.76	60S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1	[more]

BLAST of PI0014935 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041394.1	1.6e-47	87.72	60S ribosomal protein L18-2 [Cucumis melo var. makuwa]	[more]
TYJ96153.1	1.2e-45	85.96	60S ribosomal protein L18-2 [Cucumis melo var. makuwa]	[more]
XP_011659839.1	1.0e-41	82.76	60S ribosomal protein L18-2 [Cucumis sativus] >KAE8653364.1 hypothetical protein...	[more]
XP_008450608.1	1.0e-41	82.76	PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosoma...	[more]
XP_038887726.1	3.9e-41	81.90	60S ribosomal protein L18-2-like [Benincasa hispida]	[more]

BLAST of PI0014935 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05590.1	1.1e-41	74.78	ribosomal protein L18	[more]
AT5G27850.1	6.0e-40	72.17	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.1	7.2e-33	63.79	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.2	7.2e-33	63.79	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.100.10.10		coord: 81..207 e-value: 6.9E-46 score: 158.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..208
None	No IPR available	PANTHER	PTHR10934:SF18	60S RIBOSOMAL PROTEIN L18-1-RELATED	coord: 95..207
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 94..206 e-value: 8.9E-43 score: 145.9
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 95..207
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 102..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014935.1	PI0014935.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome