PI0014925 (gene) Melon (PI 482460) v1

Overview
NamePI0014925
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr09: 12936203 .. 12941253 (-)
RNA-Seq ExpressionPI0014925
SyntenyPI0014925
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAGGATCATATAGTACTGAAACAACAAAAGGATCAGATCAGGCCTTATTAGAAGATAATCATCGCTTGTTATCCATGATATCCACTCTCAAACTTGAGTTGCAAGTTGTTCGTGCGGACTTTGAAGCTCTATCCAAGTCGATCAAAATGCTTAGTTCTGGCACACAAAGTCTGGACAGTATTATGAAAGCTGGCAAGATTGGTATGGACAAAAAAGGGGATAGGATTCTCTGATAGAAGTCAATAGGGAACATCCAATGGATGTCCGAGAATGGTGTTTGTTTGTGCTAAGAAAGCTTGTATCGAGGAAACTGAAAAGGGTATATCTTAAGAAGGAAATTTAATTGACCGAGACAGGTTAGGAAAACTAGAGAAGGTGGGTGCATCACTTCTGTGGTAGACCTGGCCACATTCGTCCTTTCTACTACCGGTTGCTTAATCAACATGCTCACTTTAACAAGTATGTGAACAGAGGCTTTAGAAGGGTCAATTCAAAACAAGGCAATTCCAAATTTGTATGGAAAGTGAAACGAGATAACAGGTGCAATGTGACTTTCACATTCATTCATGCCTCAAGTAGAGAAGACTGATACTTCGATAGCGGCTACTCTCGTCATATGACTGAGAATTCTTCATTCTTTTATGACCTAAAGGAATGCTCTTTAGGGTATGTCACCTTTGTAGACGGAGCTAAAGGGAAAGTGCTAGGGAAAGGAGATATTGCTAAACTTAATTTGCCAAAATTTCAAGATGTGAGACTTATCAAAGGTGTAACTGCTAACTTAATTAGCATTAGTCAGTTGTGTGACCAAAGATTCAGTGTCAGTTTCTCAAAAGATAAATGTGAAGTTCATGATAAAGGGAGGCGTGTTATTATGAGTGGTACACGACTTTCTAATAACTAATATCATTGGGATCCCTATACAAAACAGTCAATGTGTAATTTGTCCAAAACAAGTGATGCAAAGTTATGGCATAAACAACTTGGACATGTAGTCTACCATCTATTTGCAAAGTGCTCAGTGCTGAGCCTGTCTTAGGAATTCCTTCTATCGAGATAGATGGTGATACGTTCTATAGTGAGTGTTTGGCAGGGAAGCAAGTCAAGGCATCTCACAAATCAGTTAATCCATGTACTACAAATCGGGTTCTTAAGCTCTTACACATTGATCTCATGGGTCCTATGCAAGTTGAAAGCCTTGGTGGGAAGAAGTATGCTTTTGTGTGTGTTGATGACTTTTTCGGCTGCTTTACCTGGGTGAAGTTCCTTCAGGAGAATCTGATGCGCTTAAAGTCTGTTGTGCTTTCTACATACAGCTTAAACGAGAATAAGAGAAGGCCATTATTCAAATTCGTAGTGATCATGACCAGGAATTCGAAAATGCTTCTTTTGATGAGTTTTGTTGCATAGAGGGTATTGTCCATGAGATTGGCTCCCTTAACTCCTCAGCAGAATGAAGTGGTAGAACGGTAGAATAGAACTCTACAAGAAATGTCTCGTGTTATGCTTCATTCAAAGAATCTACCTCTCTATTTTTGGGTTGAAGTGTTGAATACTGCTTGTCATATTCACAATTGGATTGCTCTACGTCCGAGACCTTCTAGCACCAGTTATCAACTTTGGAAAGATCGCAAACCGAATGTTAAGTATTTCCACGTCTTTTGGAGTATTTGTTATATTCTAACAGAGAAAGAATATCATAAAAAATGGGACTCCAAGATTGATGAGGACACATTTTTGGGATACTTCACAAGCAGTAGGGCATTCAAAGTGTTTAATAAGCGGACACAAACTGTCTTGGAGTTTATCAATGTGGTGATAAACGAATCCTTCAAAGTGATGTATGGATGGAGAGATGATGATGATGATGTTCCTCTTCTTGTGCCTGCTTCAAGACCTTCAAGGTCTGCTGAGAGCCAGACTGATGTTACTTCAGTCAATGAGTCTTGTGATAGTTGAAGGGACAATACATCTACTAATGTGTCAGATACTGAGGCTACAGTGGTATCGCCAGCTGATAGCATGAGGAATAACTCTAGGGACTCCAGATAGTCTGATTCTGCAGTTGCTTCAGTTGAGGCCTCGTTTGCTTATGTTTAGAAAAATTATTCGTTGAGCAGTATTATTGGCGAGATCTAGAGTAGTATTACGACTCGTAAGAAGAAACAAATGGATTATGCCAAGATGATTGCAAATGTTTGCTACACATCTTAGGTTGAACCTACTAGTGTATCAGATGCCTTTAAGGATGAACTGTGGATTTCTGCCATGCAGGACGAACTGGTTCAGTTTGAGCGAAATCAAGTATGAGAATTGGTTCCTAGACTTGCGGATGCTAAAGTTATTGGCACAAAGTAGATTTTTAAGAATAAAACTGATGAGCACGAAATTGTCACCAAAAATAAAGCTAGGCTTGTGGCTCATGGATATTCACAAATAAAAGGTGTAGATTTTGGAGAAACATTTGTGCCATAGCAAGACTGGAAGCAATTTGCTTACTGATAACTTGTAGAAATACAAGTTATTGCGGCCTTTTAGGTAGAATAATGAAGCTATACGCAGTGGAAAATGAGAAAATAACATTGATTGATGATTGTGAAAGATAAATTGTTTCTCAAAGAGTTAAAGAGTCAAATTCCTATTTTACGCATTTTATCATGTCTTATGCAGGATTTTAAGACGAAATGAGAAGTAACCACGCGAAGAAAGCATCAGGCGAGGAACCACGCGGGCAACTAGGCGAACTTGAACACATGGCTAGGCGATCCAAAGCTCTAGCCGACAATCTAGCCCGTGGAGATGTCAGAAAGGACACCTATAACAGTGTTGCGGTTGGCAGAAGAATTAATTAACTGTCCAGTGTCCTGTCACATCACGCCTCTCCTATATATATGGTGGAACCTTCTTAATTTACGACATGCGAAAATAGAGAGCGAATCCCTTTTCTCCACTTCCCCTTCTCTGCCTTGGTGAGAACCAGTTGTAAAGAGTTTACCGCTTCCCCCTTAATGTATAAGCAAAAATCAGAGCCAAGGAGTATGAGAAATCATACTCTGCAGCTCAGCCCCTTTCTTTGTATTTCATTTTGTTATTTAGAAACGCATTGTAATGTAAACTACCTGGTCACAAGACCTAGTATCTTAATTGTAATGAAAATCTTTTCTTGCTTTCATTCTCCCATCTCTTTACTTCACCATAACTATGAAATATGCATGAAAGATGTAACTATAATTCATTGCGAAGAAATCGTAAGATTTTCGTTATGCGGTCTTGCTTGGCAGGTGGCGAAGAGACGTAGAGACATAATCTTATCGCGGAACTTATCCTTAGCACATGAGACAGAAATGTTTAAGTGTGTGGCGGAAGCACCGAGAGGTTGCTCGCCTTAATTAAGGGTGGTGAAACATAAAGTAAAAACACGATTAGTTATAAATCATCCCTTAACTTTATGTATTTGGATCCCGAGAGGCGAGCAAGTATGGCGAAGGCACCGAAAAGGTTGCTCGCCTTAAAACTGAAGTTAATGAATGCTTTATAACGCCTTTTACGTGATAATAGTTGCATTGTATAATACATGATTCCTTCATTAAACACTGCCTAGAAATTGAGTTCGCATACTTCACATAATCCACTCTCCATAATCATACTCGTCATCTCGTTTGCATGATAGTGTAAATAATTAGACACCACAGAAATTACTTGTAAATGATACTGTATACCACACAAAGATTAGAACGCCTAATGAACCATTTAGTAAACCAAAATCCCTGCGTTCAACCCTGGCTTACCTAGGAAACCTCTTGCTCCGCTTATACTTGGGCGAGCAAGAGGAAAACTTGTACTTAACGAATCATCATTAGCAAGCATGCAACACATAGGCCTAGCTCTGCCCTTTTTAACGCATGATACTCGCCTAGTCGCCTAGTACCTTAGTCGCCTAATTAGAGCCTTGTTGAATATCTACGAATCGATTTTAAGAACCAAGTTTTTGCCACCGTTGTCGGGGATTTTATGTTTATCTTTTTGAGTTTAATCTGTGTGCTAATCTTGTGCAGAAGTTCAATTTCAGCTGAATCGTGCGTTCAAACCTGAAGAGCGTGTGAACAAGTTTAAGAGTGACGGTGAACAAGCGCAATTCGAGCTTGACCCTGAAATTGAGCGAACTTTTCGACGTAATTGGCGAAGAGCAAGGCAAAGACACGCAAGAAGAATGGAAAATAATAACAATAGAAATGCTCCTCCGCCGCAAGCTGCGCAAGAACCAAACGCCGCCTACATGGCGCATGACCTGGACAGGTCAATTAGGTCATATGTTGTGCCCAACCTCTATAACTTCAATCCAGGGATCGCCTACCTTGTGTTCGGCGAAAATGCAAGGTTTGAAATCAAGCCTGTGATGCTACAAATGATTTAGAACGTCGGACAGTTTTGCGGTCATCCTGGAGAAGATCCACACGATCACATTAGAAGTTTCTACTCTATTTGTGCTTCCTTCCATATGCTAGACATCTCATCTGAGGAATTGAGATTCACACTATTTTCGTTAACTCTAAGGGATGAGGCGAAAAGGTGTGCCAACGCCATGGAAGATGGCGAGGTAGGAACATGGGATCAATTGATAGAGAAATTTATGAAGAAATTTTTCCCACCTCACGAGAACGTGAGAAGAAGGAAGGAGCTCATGACCTTCCAGCAGAAAGATAGAGAGAACGTACATGATGCAGGGAGTAGGTTCAAGAGGATGGTCAAACCATGTCCCCACAATGGCATTCCCGAATGCATCTTGATGGAGGTCTTCTACTTTGGCTTGAACAAGGCAACACAGCAGACTGCTAATGCTGTATTTGTAGGTGGTATGTTGAAAAGCTCCTACAACCAGATTAAGGTAATGCTGGACACAATGGCCAGCAATAATGAAGAATGGGGAGAAACGGGTCAACAAAATCAAGGACGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCATCTAGCTCCCACGCGTGGTACCACAACAACAGACCCCAACACTCCCAGCATCAATAA

mRNA sequence

ATGGGAAGAGGATCATATAGTACTGAAACAACAAAAGGATCAGATCAGGCCTTATTAGAAGATAATCATCGCTTGTTATCCATGATATCCACTCTCAAACTTGAGTTGCAAGTTGTTCGTGCGGACTTTGAAGCTCTATCCAAGTCGATCAAAATGCTTAGTTCTGGCACACAAAGTCTGGACAGTATTATGAAAGCTGGCAAGATTGACGAAATGAGAAGTAACCACGCGAAGAAAGCATCAGGCGAGGAACCACGCGGGCAACTAGGCGAACTTGAACACATGGCTAGGCGATCCAAAGCTCTAGCCGACAATCTAGCCCGTGGAGATGTCAGAAAGGACACCTATAACAGTGTTGCGGTGGCGAAGAGACGTAGAGACATAATCTTATCGCGGAACTTATCCTTAGCACATGAGACAGAAATGTTTAAGTGTGTGGCGGAAGCACCGAGAGAAGTTCAATTTCAGCTGAATCGTGCGTTCAAACCTGAAGAGCGTGTGAACAAGTTTAAGAGTGACGGTGAACAAGCGCAATTCGAGCTTGACCCTGAAATTGAGCGAACTTTTCGACGTAATTGGCGAAGAGCAAGGCAAAGACACGCAAGAAGAATGGAAAATAATAACAATAGAAATGCTCCTCCGCCGCAAGCTGCGCAAGAACCAAACGCCGCCTACATGGCGCATGACCTGGACAGGTCAATTAGGTCATATGTTGTGCCCAACCTCTATAACTTCAATCCAGGGATCGCCTACCTTGTGTTCGGCGAAAATGCAAGGGATGAGGCGAAAAGGTGTGCCAACGCCATGGAAGATGGCGAGGTAGGAACATGGGATCAATTGATAGAGAAATTTATGAAGAAATTTTTCCCACCTCACGAGAACGTGAGAAGAAGGAAGGAGCTCATGACCTTCCAGCAGAAAGATAGAGAGAACGTACATGATGCAGGGAGTAGGTTCAAGAGGATGGTCAAACCATGTCCCCACAATGGCATTCCCGAATGCATCTTGATGGAGGTCTTCTACTTTGGCTTGAACAAGGCAACACAGCAGACTGCTAATGCTGTATTTGTAGGTGGTATGTTGAAAAGCTCCTACAACCAGATTAAGGTAATGCTGGACACAATGGCCAGCAATAATGAAGAATGGGGAGAAACGGGTCAACAAAATCAAGGACGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCATCTAGCTCCCACGCGTGGTACCACAACAACAGACCCCAACACTCCCAGCATCAATAA

Coding sequence (CDS)

ATGGGAAGAGGATCATATAGTACTGAAACAACAAAAGGATCAGATCAGGCCTTATTAGAAGATAATCATCGCTTGTTATCCATGATATCCACTCTCAAACTTGAGTTGCAAGTTGTTCGTGCGGACTTTGAAGCTCTATCCAAGTCGATCAAAATGCTTAGTTCTGGCACACAAAGTCTGGACAGTATTATGAAAGCTGGCAAGATTGACGAAATGAGAAGTAACCACGCGAAGAAAGCATCAGGCGAGGAACCACGCGGGCAACTAGGCGAACTTGAACACATGGCTAGGCGATCCAAAGCTCTAGCCGACAATCTAGCCCGTGGAGATGTCAGAAAGGACACCTATAACAGTGTTGCGGTGGCGAAGAGACGTAGAGACATAATCTTATCGCGGAACTTATCCTTAGCACATGAGACAGAAATGTTTAAGTGTGTGGCGGAAGCACCGAGAGAAGTTCAATTTCAGCTGAATCGTGCGTTCAAACCTGAAGAGCGTGTGAACAAGTTTAAGAGTGACGGTGAACAAGCGCAATTCGAGCTTGACCCTGAAATTGAGCGAACTTTTCGACGTAATTGGCGAAGAGCAAGGCAAAGACACGCAAGAAGAATGGAAAATAATAACAATAGAAATGCTCCTCCGCCGCAAGCTGCGCAAGAACCAAACGCCGCCTACATGGCGCATGACCTGGACAGGTCAATTAGGTCATATGTTGTGCCCAACCTCTATAACTTCAATCCAGGGATCGCCTACCTTGTGTTCGGCGAAAATGCAAGGGATGAGGCGAAAAGGTGTGCCAACGCCATGGAAGATGGCGAGGTAGGAACATGGGATCAATTGATAGAGAAATTTATGAAGAAATTTTTCCCACCTCACGAGAACGTGAGAAGAAGGAAGGAGCTCATGACCTTCCAGCAGAAAGATAGAGAGAACGTACATGATGCAGGGAGTAGGTTCAAGAGGATGGTCAAACCATGTCCCCACAATGGCATTCCCGAATGCATCTTGATGGAGGTCTTCTACTTTGGCTTGAACAAGGCAACACAGCAGACTGCTAATGCTGTATTTGTAGGTGGTATGTTGAAAAGCTCCTACAACCAGATTAAGGTAATGCTGGACACAATGGCCAGCAATAATGAAGAATGGGGAGAAACGGGTCAACAAAATCAAGGACGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCATCTAGCTCCCACGCGTGGTACCACAACAACAGACCCCAACACTCCCAGCATCAATAA

Protein sequence

MGRGSYSTETTKGSDQALLEDNHRLLSMISTLKLELQVVRADFEALSKSIKMLSSGTQSLDSIMKAGKIDEMRSNHAKKASGEEPRGQLGELEHMARRSKALADNLARGDVRKDTYNSVAVAKRRRDIILSRNLSLAHETEMFKCVAEAPREVQFQLNRAFKPEERVNKFKSDGEQAQFELDPEIERTFRRNWRRARQRHARRMENNNNRNAPPPQAAQEPNAAYMAHDLDRSIRSYVVPNLYNFNPGIAYLVFGENARDEAKRCANAMEDGEVGTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHNGIPECILMEVFYFGLNKATQQTANAVFVGGMLKSSYNQIKVMLDTMASNNEEWGETGQQNQGRHGGQGDHRGEASSSHAWYHNNRPQHSQHQ
Homology
BLAST of PI0014925 vs. ExPASy TrEMBL
Match: A0A5A7V1F3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002850 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.5e-50
Identity = 101/172 (58.72%), Postives = 135/172 (78.49%), Query Frame = 0

Query: 214 PPQAAQEPNAAYMAHDLDRSIRSYVVPNLYNFNPGIAYLVFGENA----RDEAKRCANAM 273
           P   A      Y+AH+L R IRSY +P+LY FNPGIAY  FGENA    +D+AKR AN+M
Sbjct: 6   PVNQAIHVATTYLAHNLHRPIRSYALPSLYEFNPGIAYPEFGENAHYESKDDAKRWANSM 65

Query: 274 EDGEVGTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHN 333
           E GEV TW+ LIEKFMKKFFP  +  +RR++L+ F+Q+DR+N+HDA S FKRMVK C H+
Sbjct: 66  EHGEVTTWEDLIEKFMKKFFPTIKIAKRRQDLILFKQRDRKNLHDAWSIFKRMVKACLHH 125

Query: 334 GIPECILMEVFYFGLNKATQQTANAVFVGGMLKSSYNQIKVMLDTMASNNEE 382
           GI + +LME FYFGL+K T+Q+A+++F+GG+L+SSYNQIK MLD+MA+N+++
Sbjct: 126 GITKYVLMEGFYFGLSKDTRQSADSLFIGGILRSSYNQIKAMLDSMANNSQD 177

BLAST of PI0014925 vs. ExPASy TrEMBL
Match: A0A5D3E4P5 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1985G00070 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.8e-38
Identity = 101/215 (46.98%), Postives = 131/215 (60.93%), Query Frame = 0

Query: 214 PPQAAQEPNAAYMAHDLDRSIRSYVVPNLYNFNPGIAYLVFGEN----ARDEAKRCANAM 273
           P   A      Y+AH+L R IRSY +P+LY FNPGIAYL FGEN    ++D+AKR AN+M
Sbjct: 6   PVNQAIHVATTYLAHNLHRPIRSYALPSLYEFNPGIAYLEFGENGHCESKDDAKRWANSM 65

Query: 274 EDGEVGTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHN 333
           E GEV TW+ LIEKFMKKFFP  +  +RR++L+ F+QKDR+N+HDA S FKRMVK C H+
Sbjct: 66  EHGEVTTWEDLIEKFMKKFFPTIKIAKRRQDLILFKQKDRKNLHDAWSIFKRMVKACLHH 125

Query: 334 GIPECILMEVFYFGLNKATQQTANAVFVGGMLKSSYNQIKVMLDTMASNNEEWGETGQQN 393
           GI + +LME FYFGL K  ++  +    GG    + +   + L+ +AS +          
Sbjct: 126 GITKYVLMEGFYFGLIKHVEE-MDCAGCGG--PHNTDACPLNLEIVASTSVR-------- 185

Query: 394 QGRHGGQGDHRGEASSSHAWYHNNRPQHS---QHQ 422
                G G HR E    H  +HNN   HS   QHQ
Sbjct: 186 --ATSGSGGHRAETFGYHQRHHNNISHHSLPQQHQ 207

BLAST of PI0014925 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-25
Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = 0

Query: 253 VFGENARDEAKRCANAMEDGEVGTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENV 312
           +F  + RD A+   N +    V  W+ L EKF++K+FPP  N + R E+M+FQQ + E+ 
Sbjct: 100 LFPFSLRDRARSWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSEIMSFQQLEDEST 159

Query: 313 HDAGSRFKRMVKPCPHNGIPECILMEVFYFGLNKATQQTANAVFVGGMLKSSYNQIKVML 372
            DA  RFK +++ CPH+GIP CI ME FY GLN A++   +A   G +L  SYN+   +L
Sbjct: 160 SDAWERFKELLRKCPHHGIPHCIQMETFYNGLNAASRMVLDASANGAILSKSYNEAFEIL 219

Query: 373 DTMASNNEEWGET 386
           +T+ASNN +W  T
Sbjct: 220 ETIASNNYQWSNT 232

BLAST of PI0014925 vs. ExPASy TrEMBL
Match: A0A5D3DR17 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00450 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-25
Identity = 71/146 (48.63%), Postives = 97/146 (66.44%), Query Frame = 0

Query: 272 GEVGTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHNGI 331
           GEV TW+   ++ +KKFF   +NVRRR++ M F+Q++ EN+HDA SRFKR++K C   GI
Sbjct: 115 GEVTTWE---DQIVKKFFLLIKNVRRRQDPMLFKQREGENLHDAWSRFKRIMKFCLPKGI 174

Query: 332 PECILMEVFYFGLNKATQQTANAVFVGGMLKSSYNQIKVMLDTMASNNEEWGETGQQNQG 391
           PE +LMEVFYF L+K TQ T  AVF GGMLKS YNQIK ML++MA N++EW ++      
Sbjct: 175 PEYVLMEVFYFKLSKDTQHTVGAVFAGGMLKSFYNQIKSMLNSMAGNSQEWDDS--DFSS 234

Query: 392 RHGGQGDHRGEASSSHAWYHNNRPQH 418
           R  G+   + +      W++ N   H
Sbjct: 235 RLVGEEKLKTDWIERQWWHYKNNGYH 255

BLAST of PI0014925 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-24
Identity = 59/140 (42.14%), Postives = 89/140 (63.57%), Query Frame = 0

Query: 253 VFGENARDEAKRCANAMEDGEVGTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENV 312
           +F  + RD AK   N +  G + +W+ L+EKF+ K+FPP  N R R E++ FQQ + + +
Sbjct: 129 LFPYSLRDGAKSWLNTLALGTIDSWNSLVEKFLIKYFPPTRNARFRNEIVVFQQFEDDTL 188

Query: 313 HDAGSRFKRMVKPCPHNGIPECILMEVFYFGLNKATQQTANAVFVGGMLKSSYNQIKVML 372
            +A  RFK M++ CPH+G+P CI ME FY GLN AT+Q  +A   G +L  +YN+   +L
Sbjct: 189 SEAWERFKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANGAILSKTYNEAYEIL 248

Query: 373 DTMASNNEEWGETGQQNQGR 393
           + +ASNN +W +  + N GR
Sbjct: 249 ERIASNNCQWADV-RSNPGR 267

BLAST of PI0014925 vs. NCBI nr
Match: KAA0061983.1 (uncharacterized protein E6C27_scaffold89G002850 [Cucumis melo var. makuwa])

HSP 1 Score: 208.8 bits (530), Expect = 9.4e-50
Identity = 101/172 (58.72%), Postives = 135/172 (78.49%), Query Frame = 0

Query: 214 PPQAAQEPNAAYMAHDLDRSIRSYVVPNLYNFNPGIAYLVFGENA----RDEAKRCANAM 273
           P   A      Y+AH+L R IRSY +P+LY FNPGIAY  FGENA    +D+AKR AN+M
Sbjct: 6   PVNQAIHVATTYLAHNLHRPIRSYALPSLYEFNPGIAYPEFGENAHYESKDDAKRWANSM 65

Query: 274 EDGEVGTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHN 333
           E GEV TW+ LIEKFMKKFFP  +  +RR++L+ F+Q+DR+N+HDA S FKRMVK C H+
Sbjct: 66  EHGEVTTWEDLIEKFMKKFFPTIKIAKRRQDLILFKQRDRKNLHDAWSIFKRMVKACLHH 125

Query: 334 GIPECILMEVFYFGLNKATQQTANAVFVGGMLKSSYNQIKVMLDTMASNNEE 382
           GI + +LME FYFGL+K T+Q+A+++F+GG+L+SSYNQIK MLD+MA+N+++
Sbjct: 126 GITKYVLMEGFYFGLSKDTRQSADSLFIGGILRSSYNQIKAMLDSMANNSQD 177

BLAST of PI0014925 vs. NCBI nr
Match: WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-38
Identity = 99/287 (34.49%), Postives = 145/287 (50.52%), Query Frame = 0

Query: 170 FKSDGEQAQFELDPEIERTFRRNWRRARQRHARR-MENNNNRNAPPPQAAQ--------- 229
           + S+G+   F++DPEIERTFRR  R+ +QR + + +E N +     PQA Q         
Sbjct: 1   YMSEGDNPTFDIDPEIERTFRRRIRQIKQRRSNQTIEENMDAQYNQPQAPQAGVRQNANA 60

Query: 230 ------EPNAAYMAHDLDRSIRSYVVPNLYNFNPGIAYLVFGENA--------------- 289
                 + N   +AHD +R +R Y  PNLYNF PGI    F  N                
Sbjct: 61  QEHANYDTNPIVLAHDRNRPMREYASPNLYNFAPGILQPTFEGNGRFEMKPVMLQMLQAA 120

Query: 290 --------------------------------------------RDEAKRCANAMEDGEV 349
                                                       RDEA++ A + E GE+
Sbjct: 121 GQFGGATGEDPHAHLKSFLEICSAFPMAGVPQDSIRLTLFPFSLRDEARQWAYSFEPGEI 180

Query: 350 GTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHNGIPEC 382
            TW +++EKFM+K+FPP  + +RR++++TF+QKD E   +A +RFKR+V+ CPHNGIP C
Sbjct: 181 TTWGKMVEKFMQKYFPPTVSAKRRRDIVTFEQKDSETFSEAWTRFKRLVRNCPHNGIPNC 240

BLAST of PI0014925 vs. NCBI nr
Match: TYK30531.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-37
Identity = 101/215 (46.98%), Postives = 131/215 (60.93%), Query Frame = 0

Query: 214 PPQAAQEPNAAYMAHDLDRSIRSYVVPNLYNFNPGIAYLVFGEN----ARDEAKRCANAM 273
           P   A      Y+AH+L R IRSY +P+LY FNPGIAYL FGEN    ++D+AKR AN+M
Sbjct: 6   PVNQAIHVATTYLAHNLHRPIRSYALPSLYEFNPGIAYLEFGENGHCESKDDAKRWANSM 65

Query: 274 EDGEVGTWDQLIEKFMKKFFPPHENVRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHN 333
           E GEV TW+ LIEKFMKKFFP  +  +RR++L+ F+QKDR+N+HDA S FKRMVK C H+
Sbjct: 66  EHGEVTTWEDLIEKFMKKFFPTIKIAKRRQDLILFKQKDRKNLHDAWSIFKRMVKACLHH 125

Query: 334 GIPECILMEVFYFGLNKATQQTANAVFVGGMLKSSYNQIKVMLDTMASNNEEWGETGQQN 393
           GI + +LME FYFGL K  ++  +    GG    + +   + L+ +AS +          
Sbjct: 126 GITKYVLMEGFYFGLIKHVEE-MDCAGCGG--PHNTDACPLNLEIVASTSVR-------- 185

Query: 394 QGRHGGQGDHRGEASSSHAWYHNNRPQHS---QHQ 422
                G G HR E    H  +HNN   HS   QHQ
Sbjct: 186 --ATSGSGGHRAETFGYHQRHHNNISHHSLPQQHQ 207

BLAST of PI0014925 vs. NCBI nr
Match: XP_038887458.1 (uncharacterized protein LOC120077591 [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 6.7e-32
Identity = 96/285 (33.68%), Postives = 144/285 (50.53%), Query Frame = 0

Query: 178 QFELDPEIERTF--RRNWRRARQRHARRMENNNNRNAPPPQAAQEP--NAAYMAHDLDRS 237
           +FE +PEI+ TF  R +  RA +R     +NNNN      Q    P  +  ++A D +  
Sbjct: 8   EFEANPEIDHTFRTRAHQNRAWRRRINMADNNNNEAPEGNQGVNRPVQDPVFLAADHNIP 67

Query: 238 IRSYVVPNLYNFNPGIAYLVFGENA----------------------------------- 297
           IR+Y  PNLY+F+PGI+  +  ENA                                   
Sbjct: 68  IRNYAAPNLYDFSPGISRPIVEENARFEIKPVMVQMIQNMRQFESLQCENPHAHLTIFVE 127

Query: 298 ------------------------RDEAKRCANAMEDGEVGTWDQLIEKFMKKFFPPHEN 357
                                   RD+AKR A+++E  E+ + DQL+E FMKKFFPP  N
Sbjct: 128 MCSTFSIPGITPVGIRLYLFPYTLRDKAKRWAHSLEANEITSSDQLVEWFMKKFFPPAIN 187

Query: 358 VRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHNGIPECILMEVFYFGLNKATQQTANA 400
            RRRK ++ F++ D E +  A  RF+R+VK CPH GI +C+LME+FY GLN++TQ  A+A
Sbjct: 188 TRRRKNVLNFEKMDNETLSTAWVRFRRLVKNCPHIGILDCVLMEMFYNGLNRSTQAVADA 247

BLAST of PI0014925 vs. NCBI nr
Match: XP_030503898.1 (uncharacterized protein LOC115719117 [Cannabis sativa])

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-28
Identity = 80/220 (36.36%), Postives = 119/220 (54.09%), Query Frame = 0

Query: 167 VNKFKSDGEQAQFELDPEIERTFRRNWRRARQRHARRMENNNNRNAPPPQAAQEPNAAYM 226
           +N+ + D E A   +DPEIERTFR+  +  + +    M +          A  E N   +
Sbjct: 1   MNEQEEDLELA--PIDPEIERTFRQRRKEQKAKKHCNMADGFEIGG----AHNEANPIAL 60

Query: 227 AHDLDRSIRSYVVPNLYNFN----PGIAYLVFGENARDEAKRCANAMEDGEVGTWDQLIE 286
           A D  R+IR Y +P     N      +   +F  + RD A+   N +    V  W+ L E
Sbjct: 61  ADDRARAIREYALPMFNELNRVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAE 120

Query: 287 KFMKKFFPPHENVRRRKELMTFQQKDRENVHDAGSRFKRMVKPCPHNGIPECILMEVFYF 346
           KF++K+FPP  N + R E+M+FQQ + E   DA  RFK +++ CPH+GIP CI +E FY 
Sbjct: 121 KFLRKYFPPTRNAKFRSEIMSFQQLEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYN 180

Query: 347 GLNKATQQTANAVFVGGMLKSSYNQIKVMLDTMASNNEEW 383
           GLN A++   +A   G +L  SYN+   +L+ +ASNN +W
Sbjct: 181 GLNAASRMVLDASANGAILSKSYNEAFEILERIASNNYQW 214

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V1F34.5e-5058.72Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3E4P56.8e-3846.98Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. mak... [more]
U5CUI22.3e-2543.61Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT... [more]
A0A5D3DR176.6e-2548.63Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A6J1EEI21.1e-2442.14uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... [more]
Match NameE-valueIdentityDescription
KAA0061983.19.4e-5058.72uncharacterized protein E6C27_scaffold89G002850 [Cucumis melo var. makuwa][more]
WP_217833177.11.3e-3834.49retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... [more]
TYK30531.11.4e-3746.98Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuw... [more]
XP_038887458.16.7e-3233.68uncharacterized protein LOC120077591 [Benincasa hispida][more]
XP_030503898.12.0e-2836.36uncharacterized protein LOC115719117 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 256..345
e-value: 4.1E-12
score: 46.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..421

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0014925.1PI0014925.1mRNA