PI0014888 (gene) Melon (PI 482460) v1

Overview


Name	PI0014888
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	cytochrome-c oxidases;electron carriers
Location	chr11: 5089746 .. 5093907 (+)
RNA-Seq Expression	PI0014888
Synteny	PI0014888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAATTGTAATTTTAACCCAAAAGAAAAGAAGTATTAAAATAAAACCGCCTCCTCATCACAGGCATTCGTCCCCATCTGCTGCATCACTCGAAGCAACGATTTGCCGTTATCTATCCTCACCCGAGTTTAGCTCCATTCTCTGGTTTCTTCGTTAGGTCTGGGAGTAAGATTTCACGAACGCCTTAATAATTTGATCTAGCATTCGATTTTTAATTGTTCTTGTTTTCGTTTTTCCGTCACTATCTGGTTAATTTGTTTCGCCATTATTTTTTGTTTGTGATTTATCCATCCACTTGAAATGATTGATCCCCTTTATTTATTTTTGTTGCTGTGGCTGTGTTAATTTCCGATGAGTGTTTTTAGGGCATCGGTTTTTGTATGTTTCTGTTTACCCATTGATTGAAACACGGAATTGGGTTCATTATACCGCTAGTCAGTGGATGTTTTTCGAGGGAGAAATAGAAGTTACTAGATTTTAATTTATTTCCATTGTGAACGTAATTTATGTAAATTGAAAGAAATTAGAGATTCTTATTTATAATTATAGTTTTCTTTGTTATTGTAGTATTCAACTCTCCATTCACTGCTTGTACAAAAAAACAACATTCTAGTAAAAAGAATATGGTATCAGTCACATTTTTAGGTCTTAAAACAGCTACTGCCGGCGTCGGATATCCGAAGCGAACATTGTGTCCTGCTCACACATTCTTGCCATCTGGATCCTTTTGTCCAAATCCGATGTCCAACTCGCCCTTTCGTGAGGAAGAAACCACCTCAGTCCAGCTCTCCCTTGCCTGAGGAAGAAACCAAATAAAATATTAGCCTTAAATTTTTCAATGGTGATAGACAAATATTTTATTGATTGATCCGATTCGGTTACAATAGACCCAATATTTAGAGGCTAGTCACATCATCTATCGAGGGATAATACTAAAGATGACTTAGAAGAGAACTGAAGTTCGTGTCCTAGAGTACCCTTGATATAACGAAGAATTCGAAGAACTGCATAAAATGTATGGTTCGTGGAGTCAAAATATGCAACATTTGGACTTGTCACAGTCAGATAAATAAGGCTACCACCAAGTTGACTATACAGACTGACATCTTCTAGAGGAACACCATCAAACGGAGTCAAATGAACAATGGAATCGAGTGATGTTGGCGTTGTGGCAGAATCAGTGATGCCCGAGCAAGCCAAAAGATCAGAGACAGTTTGCTTGGGACAACAAGTAACCTTCAGGGCACGTTGATACCTCACGTCCAAGAAAGTAATTAAGTGATCCTAAATCTTTCATCTCAAAGTGTTTCTCAAGTTAATGTTGTAAATCAGATATAATCTTAAGGATCATCGCCAATAATAGTAATCATATCATCAAAACATAGCAGAAGCAGAACAATAGTGTAGGGTGTTTTGTGTGTAAAGAGAGTTGTATCATGTGGACTTGACTTAAACCCAAGTTGGATAATGGTAGAACTGAAGGTTGCAATCCAAGCTCATGGAGCCTGTTTTAGACCATATAATGCACGACGAAGAAGACACACCTTTTGGGGTGGGGGAGAAGTAGTTGGAGATGGGTTTCATATAAACTAAACTTACTTAGTTAAGGTCCCATTGGAAAATGCATTCTTGACATCCATCTGAAGAGGGGCCACTGTTTGGTAGCAGCTACTGTTAAGAGACCTCGAATAGATATCATTCAAGCCAAAGGAGCAAAAGTCTCTCTATAGTTGATGTCATATTTTTTAGAATATCAATACAAATGAAATGTTGGGAAAGGAAACAAAAGTGCTCCAAAGAACCACAACCATGAGAGAAGTATTCTTTGAAGAGCTTGAAGAAGATGCATCTCAAGAGGACAAGAATGAAAAAGTCGAGCTATCACGAAACCAACCAAAGAACATCTGAATCATAAAAAATTCATTAACTACACAAGCTAACAAGCTGCTGCCATGACTTCTGGAACACAACTAAAGGACCACTCTTGAGGAGAATATATCCAAGTCCCAGATGAAAAGGCAGGCCATTTGACGTAACATCTTCTGATGACAAAACTTCCATAAATAGATTACCAAATTCTCGCTCAAGGATGACTAGTGGAACAACTTTTTCTTGTTAAAAAATGGCCCTAAAGTACGCCCTCTTCTAACTCTTCAATGCTTACACTAATAGAAAGCACATCCATCATGGTTCTTTTTTTTTTTCCGTAACTCTCATTCCAAAAATATCTTCCTTCCAAATAATAAGCTTCTCCAAACACTTTCCAATTCTATTGCTGAAGCTGAAAATTGAAAATTGTCATCAAATCAGGACAACTCTAACAAAGAATGCTGCTGGATATTAGCCCAGAATCAGATTGGAAGCGGCTACCAATGACTTCAGATGGGCTGGGGCTTCACAAAGTTGAGCTTGAGATGAACAATCCAAATTTTGTTGTTCAATTTCCGGTTCTTCTTCACACTGAAACAGAGCATTCAAATCGAATTCTATTGGTTCCTTTGATCTTTGCTTTTCTATTTTATCTGATTTCTCAAATTGGTCAAATTCCTCCCTGCTTACACTGAATGGGGAGACAAATTAAACTTTTCTTTTCTTCTGAGATGGATCAATTGGAGTGTGAACTAGAATTCCTCTTTGAAGTTTCACCTTTGCGTTGGGGAATGATAAAACATAGTACTTAAATTGTAAGACTCCTAGTTATTGAAATAGTAAGATTAGTTGTAGAATATTAGCATCTTTTTTAGAAGGGCAAAATAGTAATTAGTTAGTAAGTTTGTTAGGTTTTTTTTTCTTTTTTTTTTGTTATAAATTGAAGGTGTGGGTTGAGAGAAAGAGTAGGAAGTATAATGTGGGATTTCCATATTGGAAGTATTGGAAGAGAGTAGCCCTCTCGAAAGGTTATGTTACATTGTAGTTTCTTCATTGATATTGCAATATATATCCATATTTTAGTGTTCTTTGTGTGTTTTTTGGTTTTTGAGTCTTCTTGTTAGGTGGCATCTTTAACACTTCCTTAATTAAGTTTGAAGCTTCGCCTCTTCTAGAGATTTGGCCTCAAGATTACCTTTAACCTTTTAGACATTGTGGCTTAATGTTGAACATGTTGGAAATGACACAGGCGAGAATTGTGTGGGGCTTAATCTTGCCAGTGTCTCTGTTTTAATATCTGATATTGTTCATGAATGGATATTGGTAGAAGTTTCAAGTGCCATTCTGTTTGAGTGTCGAGTCTCACATAGAATGATTCTCTCAGTGTTCTTTTCATTTTTTATGGATTAGACTATGTTTCAACAGTTGGAAATGAAGACTCATGTATTGTCTTTGCTTTGGAGGAACTTTTTTTTCCTTTCCTTTTTTGGTTTGGGGGTGTATAAAGGAAATGAGACTTTTCCCCCACTGTATGAGCTTTATTATTTTACAAGTGTTATGCTGAACATCTCAAAAGCATATTTTTGTTTACATATGGGATGGTTTGGGAGCTGAAAAGATGTGGGATAGTAGATTTTACAGAATTGGAGTTCCACTAATTCTCTTGCTTGAATTATAATGTAGAATGGCAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTGTTGAGAAGCAAAAATATTTCCAAAGCATCCACAAGCACACTTATCTTAAAGGGCCAATGGATAAAATCACCTCCGTTGCCATTCCAGTTGCTCTTGCAGCTTCATCACTGTATCTCATCGTAAGTGTACCTCTCTCCATTGCAGTTGAAGATTTCCTTGCCAATTTCAGATGCTGCTAAATGACTCGACCAACTGTGTTGATCTTGGTCATGTCTTTTTGAACAGGGACGAGGAATTTACAACATGTCGCACGGAATTGGAAAGAAAGAATGAGGTCGCTGTCTTGGCAACTAAATTCAAACACTTATGCTTCTAGACTCATGTGACTTTTGTTCTTGAAGGAATTTTTGTTTAATAAATGCTAAGTTCCATATTCGACTATTAGAATACTGGATATGATGCTCTGCTTTCTACTTTGTTTCTCGATATTCAGCTTACCTTTCATGAAATTGTGACTTAGAGGATGTGCATTGGGATAATGGTGTATCTATTAGAATTGTTGAGCGACATCCAATATTTTTATGACTTGGTTTTACCTTAAAACATTTTGATCAACATTTTCATA

mRNA sequence

CTAAAATTGTAATTTTAACCCAAAAGAAAAGAAGTATTAAAATAAAACCGCCTCCTCATCACAGGCATTCGTCCCCATCTGCTGCATCACTCGAAGCAACGATTTGCCGTTATCTATCCTCACCCGAGTTTAGCTCCATTCTCTGGTTTCTTCGTTAGGTCTGGGAAATGGCAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTGTTGAGAAGCAAAAATATTTCCAAAGCATCCACAAGCACACTTATCTTAAAGGGCCAATGGATAAAATCACCTCCGTTGCCATTCCAGTTGCTCTTGCAGCTTCATCACTGTATCTCATCGTAAGTGTACCTCTCTCCATTGCAGTTGAAGATTTCCTTGCCAATTTCAGATGCTGCTAAATGACTCGACCAACTGTGTTGATCTTGGTCATGTCTTTTTGAACAGGGACGAGGAATTTACAACATGTCGCACGGAATTGGAAAGAAAGAATGAGGTCGCTGTCTTGGCAACTAAATTCAAACACTTATGCTTCTAGACTCATGTGACTTTTGTTCTTGAAGGAATTTTTGTTTAATAAATGCTAAGTTCCATATTCGACTATTAGAATACTGGATATGATGCTCTGCTTTCTACTTTGTTTCTCGATATTCAGCTTACCTTTCATGAAATTGTGACTTAGAGGATGTGCATTGGGATAATGGTGTATCTATTAGAATTGTTGAGCGACATCCAATATTTTTATGACTTGGTTTTACCTTAAAACATTTTGATCAACATTTTCATA

Coding sequence (CDS)

ATGGCAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTGTTGAGAAGCAAAAATATTTCCAAAGCATCCACAAGCACACTTATCTTAAAGGGCCAATGGATAAAATCACCTCCGTTGCCATTCCAGTTGCTCTTGCAGCTTCATCACTGTATCTCATCGTAAGTGTACCTCTCTCCATTGCAGTTGAAGATTTCCTTGCCAATTTCAGATGCTGCTAA

Protein sequence

MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLIVSVPLSIAVEDFLANFRCC

Homology

[Close]

BLAST of PI0014888 vs. ExPASy TrEMBL
Match: A0A1S3C9H3 (uncharacterized protein LOC103497961 OS=Cucumis melo OX=3656 GN=LOC103497961 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 54

[Close]

BLAST of PI0014888 vs. ExPASy TrEMBL
Match: A0A0A0KDL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151660 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          MAEVEQPFRPREKLVEKQK FQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 1  MAEVEQPFRPREKLVEKQKIFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 54

[Close]

BLAST of PI0014888 vs. ExPASy TrEMBL
Match: A0A6J1K8A8 (uncharacterized protein LOC111491558 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491558 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-17
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          M   EQPFRPREKL+E+QKYFQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 1  MDMTEQPFRPREKLIERQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 54

[Close]

BLAST of PI0014888 vs. ExPASy TrEMBL
Match: A0A6J1H2N1 (uncharacterized protein LOC111459140 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459140 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-17
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          M   EQPFRPREKL+E+QKYFQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 1  MDMTEQPFRPREKLIERQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 54

[Close]

BLAST of PI0014888 vs. ExPASy TrEMBL
Match: A0A6J1K6C6 (uncharacterized protein LOC111491558 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491558 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.4e-17
Identity = 47/50 (94.00%), Postives = 50/50 (100.00%), Query Frame = 0


Query: 5  EQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          EQPFRPREKL+E+QKYFQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 3  EQPFRPREKLIERQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 52

[Close]

BLAST of PI0014888 vs. NCBI nr
Match: XP_008458612.1 (PREDICTED: uncharacterized protein LOC103497961 [Cucumis melo] >XP_008458613.1 PREDICTED: uncharacterized protein LOC103497961 [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 2.5e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 54

[Close]

BLAST of PI0014888 vs. NCBI nr
Match: KAE8646907.1 (hypothetical protein Csa_021033 [Cucumis sativus])

HSP 1 Score: 103.2 bits (256), Expect = 9.6e-19
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLIV 56
          MAEVEQPFRPREKLVEKQK FQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI+
Sbjct: 6  MAEVEQPFRPREKLVEKQKIFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLII 60

[Close]

BLAST of PI0014888 vs. NCBI nr
Match: XP_038900874.1 (uncharacterized protein LOC120087933 [Benincasa hispida])

HSP 1 Score: 103.2 bits (256), Expect = 9.6e-19
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          M EVEQPFRPREKL+EKQKYFQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 54

[Close]

BLAST of PI0014888 vs. NCBI nr
Match: XP_004145797.1 (uncharacterized protein LOC101208002 [Cucumis sativus] >XP_004145798.1 uncharacterized protein LOC101208002 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          MAEVEQPFRPREKLVEKQK FQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 1  MAEVEQPFRPREKLVEKQKIFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 54

[Close]

BLAST of PI0014888 vs. NCBI nr
Match: XP_023532621.1 (uncharacterized protein LOC111794729 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-17
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          M   EQPFRPREKL+EKQKYFQSIHKHTYLKGPMDKITSVAIP+ALAASSLYLI
Sbjct: 1  MDMTEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLI 54

[Close]

BLAST of PI0014888 vs. TAIR 10
Match: AT4G21105.1 (cytochrome-c oxidases;electron carriers )

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-17
Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = 0


Query: 5  EQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPVALAASSLYLI 55
          E PFRPREKL+EKQ+ FQSI +HTYLKGPMDKITSVAIP+ALAASSLY+I
Sbjct: 4  ETPFRPREKLLEKQRLFQSIQRHTYLKGPMDKITSVAIPIALAASSLYMI 53

[Close]

BLAST of PI0014888 vs. TAIR 10
Match: AT4G21105.2 (cytochrome-c oxidases;electron carriers )

HSP 1 Score: 66.6 bits (161), Expect = 9.3e-12
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 5  EQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIP 44
          E PFRPREKL+EKQ+ FQSI +HTYLKGPMDKITS+ IP
Sbjct: 4  ETPFRPREKLLEKQRLFQSIQRHTYLKGPMDKITSLFIP 42

The following BLAST results are available for this feature:

BLAST of PI0014888 vs.


Match Name	E-value	Identity	Description

BLAST of PI0014888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9H3	1.2e-19	98.15	uncharacterized protein LOC103497961 OS=Cucumis melo OX=3656 GN=LOC103497961 PE=...	[more]
A0A0A0KDL3	1.0e-18	96.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151660 PE=4 SV=1	[more]
A0A6J1K8A8	3.3e-17	88.89	uncharacterized protein LOC111491558 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H2N1	3.3e-17	88.89	uncharacterized protein LOC111459140 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K6C6	4.4e-17	94.00	uncharacterized protein LOC111491558 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of PI0014888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458612.1	2.5e-19	98.15	PREDICTED: uncharacterized protein LOC103497961 [Cucumis melo] >XP_008458613.1 P...	[more]
KAE8646907.1	9.6e-19	94.55	hypothetical protein Csa_021033 [Cucumis sativus]	[more]
XP_038900874.1	9.6e-19	94.44	uncharacterized protein LOC120087933 [Benincasa hispida]	[more]
XP_004145797.1	2.1e-18	96.30	uncharacterized protein LOC101208002 [Cucumis sativus] >XP_004145798.1 uncharact...	[more]
XP_023532621.1	3.1e-17	90.74	uncharacterized protein LOC111794729 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0014888 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21105.1	1.9e-17	84.00	cytochrome-c oxidases;electron carriers	[more]
AT4G21105.2	9.3e-12	79.49	cytochrome-c oxidases;electron carriers	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039297	Cytochrome c oxidase subunit VII	PFAM	PF02238	COX7a	coord: 12..54 e-value: 2.1E-11 score: 44.0
IPR039296	Predicted cytochrome c oxidase subunit VII	PANTHER	PTHR35308	CYTOCHROME C OXIDASE SUBUNIT 7	coord: 2..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014888.2	PI0014888.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane