PI0014851 (gene) Melon (PI 482460) v1

Overview


Name	PI0014851
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr04: 3711596 .. 3712813 (-)
RNA-Seq Expression	PI0014851
Synteny	PI0014851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTGACTCGCTGACCATCAATTCTGTAAGAGTTATTGCCCTTTCTCTCTCACTTTTAGCGCCTGCATATATGAACTCCAATCATTTAGCTAGTTGGAATCAGCTCATGTAGTAGCGTCACATGCACATAAAATTATCATTTCTTTTTCTTAATGGCAAGATGAATGAGAAACCACTTTGTTGTTTTTAAAAACATACACACGCAAAACCAACTTTTTGCTTAGAGGGAAAAGAAAGATTACCTGAATCTTGATCCAACTATTCTAGGTTTTTAATGGTTAGTTAAAAAACGGTGATTTAACTTATCTGCAAATAGCATAGTGATGATTTTTGTAATATGGGATCCTTCCTAAGATCTTCGAACAAAGTTGCAGGATAGTTTGCTGATAAAAAGTGTCAAGGAAAGCTAAAAAGGTATGACAACGAACTGCTGTTTCACCATTAAACTATACTGCTGAGCTTCATTTTTTAACAAAAAAATCCAAGCATGATTCACAATCCTTCAATGCTCTGATATTTCTTTTTGTTTGCATGTAAACTTGCTGCACTAAATCAGGAACCTTTTTGCATATATATTCTATTCAAAACCTAAATGAAGAGATAACCCTTCAAACATTCCTCCTCCCCTTCTTCACCCAGAAACATGAATTCAGTAGATGATCTCGGTTACAGTTACAGACGCCTTCTTAAAGATTCCTTATTCGAACATCCATTTGGAAGCCGAGAAAGAATTGTTACCATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTCTTCACCTGCTTTCGTCGTCAATTGAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGTGATTCGTCTTCGAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCAGAGTTTGAGTACGGAGATGAACTTCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCGCTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCGTTTGTTCAAACTATTGGGCCCGAAATCCAGCCTTCATATTGGCCTTCGGCCTTGGTAGTAATGCCCCATTGCCCTCTCAATTGTAA

mRNA sequence

ATGGATGCTGACTCGCTGACCATCAATTCTTTTGCTGATAAAAAGTGTCAAGGAAAGCTAAAAAGAAACATGAATTCAGTAGATGATCTCGGTTACAGTTACAGACGCCTTCTTAAAGATTCCTTATTCGAACATCCATTTGGAAGCCGAGAAAGAATTGTTACCATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTCTTCACCTGCTTTCGTCGTCAATTGAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGTGATTCGTCTTCGAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCAGAGTTTGAGTACGGAGATGAACTTCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCGCTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCGTTTGTTCAAACTATTGGGCCCGAAATCCAGCCTTCATATTGGCCTTCGGCCTTGGTAGTAATGCCCCATTGCCCTCTCAATTGTAA

Coding sequence (CDS)

ATGGATGCTGACTCGCTGACCATCAATTCTTTTGCTGATAAAAAGTGTCAAGGAAAGCTAAAAAGAAACATGAATTCAGTAGATGATCTCGGTTACAGTTACAGACGCCTTCTTAAAGATTCCTTATTCGAACATCCATTTGGAAGCCGAGAAAGAATTGTTACCATATGTGCGACTTCTGCCATTGCAGCCCTGTTTGTAATCTCTTTGTTCATCTCCCTCTTCACCTGCTTTCGTCGTCAATTGAACTCTCCTTCCTCTAAACCTCTCTCATCCACATGTAGCAGCCAGTTACTCACTACCATGCCTGTATATATCTATGGTGATTCGTCTTCGAATATGCCGTCGTCTTATTGTTTTACATCGTTTGAATCCAGGAACTGTGTCATATGTTTGGCAGAGTTTGAGTACGGAGATGAACTTCGTGTTCTGCCTAACTGCAAGCATGTGTTTCATAAAGGTTGCATTGATCAGTGGCTTCCATTGAGGTCGTTGCTTTGCCCGCTTTGTCGAGAACATACAATCAAGGAGATTGAGACCATGAGGAGACCCGTTTGTTCAAACTATTGGGCCCGAAATCCAGCCTTCATATTGGCCTTCGGCCTTGGTAGTAATGCCCCATTGCCCTCTCAATTGTAA

Protein sequence

MDADSLTINSFADKKCQGKLKRNMNSVDDLGYSYRRLLKDSLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAFGLGSNAPLPSQL

Homology

[Close]

BLAST of PI0014851 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-11
Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 79  RRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYG 138
           R  L + S+ P        +L  +P+++Y  SS N P        E   C +CL+EFE  
Sbjct: 66  RSHLRTLSASPRDQALDQAVLDKIPIFVY--SSKNPPPPE-----EKEECSVCLSEFEEE 125

Query: 139 DELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCR 172
           DE R+LP C H FH  CID W   RS  CPLCR
Sbjct: 126 DEGRLLPKCGHSFHVDCIDTWFRSRS-TCPLCR 150

[Close]

BLAST of PI0014851 vs. ExPASy Swiss-Prot
Match: Q9SJJ7 (RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 96  SQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGC 155
           SQ + ++PVY Y  ++             + +CVICL++FE G+ ++V+P+C HVFH  C
Sbjct: 118 SQAVRSLPVYRYTKAAKQ----------RNEDCVICLSDFEEGETVKVIPHCGHVFHVDC 177

Query: 156 IDQWLPLRSLLCPLCREHTI 176
           +D WL    + CPLCR + +
Sbjct: 178 VDTWLS-SYVTCPLCRSNQL 186

[Close]

BLAST of PI0014851 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 37/89 (41.57%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 83  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 142
           +S S  PL  T    +L  +P+++Y   +   P            C +CL+EFE  DE R
Sbjct: 81  SSSSLSPLDPT----VLEKIPIFVYSVKTHESP---------LEECSVCLSEFEEDDEGR 140

Query: 143 VLPNCKHVFHKGCIDQWLPLRSLLCPLCR 172
           VLP C HVFH  CID W   RS  CPLCR
Sbjct: 141 VLPKCGHVFHVDCIDTWFRSRS-SCPLCR 155

[Close]

BLAST of PI0014851 vs. ExPASy Swiss-Prot
Match: Q8H7N9 (E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0188200 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 44/135 (32.59%), Postives = 58/135 (42.96%), Query Frame = 0


Query: 55  TICATSAIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQ----------------- 114
           T+    A+   FV+    S+      Q  +P  +   ST S Q                 
Sbjct: 47  TVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRASRGLDK 106

Query: 115 -LLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCI 172
            ++   P  +YGD  + M +           C +CLAEF   DELRVLP C HVFH  CI
Sbjct: 107 EVVEAFPTAVYGDVKARMAA-----KSGPLECAVCLAEFADSDELRVLPACCHVFHPDCI 166

[Close]

BLAST of PI0014851 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 98  LLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCID 157
           L+  +PV++Y +              E  +C +CL EF   D+LR+LPNC H FH  CID
Sbjct: 123 LIDALPVFLYKEIKGTK---------EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCID 182

Query: 158 QWLPLRSLLCPLCR 172
            WL L +  CPLCR
Sbjct: 183 TWL-LSNSTCPLCR 186

[Close]

BLAST of PI0014851 vs. ExPASy TrEMBL
Match: A0A0A0KKP7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505940 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.0e-116
Identity = 206/212 (97.17%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MDADSLTINSFADKKCQGKLKRNMNSVDDLGYSYRRLLKDSLFEHPFGSRERIVTICATS 60
           MDADSLTINSFADKKCQGK+KRNMNSVDDLGYS RRLLKDSLFE PFG+RERIVTICATS
Sbjct: 1   MDADSLTINSFADKKCQGKVKRNMNSVDDLGYSNRRLLKDSLFEQPFGNRERIVTICATS 60

Query: 61  AIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCF 120
           AIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCF
Sbjct: 61  AIAALFVISLFISLFTCFRRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCF 120

Query: 121 TSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIET 180
           TSFESR CVICLAEFEYGDELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIET
Sbjct: 121 TSFESRTCVICLAEFEYGDELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIET 180

Query: 181 MRRPVCSNYWARNPAFILAFGLGSNAPLPSQL 213
           MRRPVCSNYW+RNPAFILAFGLGSNAPLPSQL
Sbjct: 181 MRRPVCSNYWSRNPAFILAFGLGSNAPLPSQL 212

[Close]

BLAST of PI0014851 vs. ExPASy TrEMBL
Match: A0A1S3B2S4 (RING-H2 finger protein ATL72-like OS=Cucumis melo OX=3656 GN=LOC103485128 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 186/191 (97.38%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 23  NMNSVDDLGYSYRRLLKD-SLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQ 82
           NMNSVDDLGYS RRLLKD SLFE PFG+RERIVTICATSAIAALFVISLFISLFTCFRRQ
Sbjct: 10  NMNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQ 69

Query: 83  LNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDEL 142
           LNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDEL
Sbjct: 70  LNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDEL 129

Query: 143 RVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAFG 202
           RVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYWARNPAFILAFG
Sbjct: 130 RVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFG 189

Query: 203 LGSNAPLPSQL 213
           LGSNAPLPSQL
Sbjct: 190 LGSNAPLPSQL 200

[Close]

BLAST of PI0014851 vs. ExPASy TrEMBL
Match: A0A5D3CLV8 (RING-H2 finger protein ATL72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001270 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.8e-102
Identity = 185/190 (97.37%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 24  MNSVDDLGYSYRRLLKD-SLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQL 83
           MNSVDDLGYS RRLLKD SLFE PFG+RERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60

Query: 84  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 143
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR
Sbjct: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120

Query: 144 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAFGL 203
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYWARNPAFILAFGL
Sbjct: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180

Query: 204 GSNAPLPSQL 213
           GSNAPLPSQL
Sbjct: 181 GSNAPLPSQL 190

[Close]

BLAST of PI0014851 vs. ExPASy TrEMBL
Match: A0A6J1GEN4 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111453465 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.6e-75
Identity = 146/192 (76.04%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 24  MNSVDDLGYSYRRLLKDSLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQLN 83
           MNS    GY+YRRLLKDSL + PFG  ER+VTIC  SAIAA FV+SLFISLFTCFRRQL 
Sbjct: 1   MNSAQAPGYTYRRLLKDSLLQRPFGHHERLVTICVVSAIAAAFVLSLFISLFTCFRRQLT 60

Query: 84  SPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT---SFESRNCVICLAEFEYGDE 143
           S SSKP SSTCS Q L++MPVYIYGDS     + YCFT   SFE+RNCVICLAEFE GDE
Sbjct: 61  SASSKPPSSTCSRQ-LSSMPVYIYGDS-----APYCFTSSSSFEARNCVICLAEFELGDE 120

Query: 144 LRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAF 203
           LRVLPNCKH FHKGCIDQWLPLRSLLCPLCRE +I EI TMR+PVC+N+WARNPAF+LAF
Sbjct: 121 LRVLPNCKHAFHKGCIDQWLPLRSLLCPLCRELSIDEIGTMRKPVCTNHWARNPAFVLAF 180

Query: 204 GLGSNAPLPSQL 213
              SNAPLPSQL
Sbjct: 181 APASNAPLPSQL 186

[Close]

BLAST of PI0014851 vs. ExPASy TrEMBL
Match: A0A6J1IJG4 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111477647 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.0e-74
Identity = 144/191 (75.39%), Postives = 155/191 (81.15%), Query Frame = 0


Query: 24  MNSVDDLGYSYRRLLKDSLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQLN 83
           MNS    GY+YRRLLKDSL + PFG  ER+VTIC  SAIAA FV+SLFISLFTCFRRQL 
Sbjct: 1   MNSAQAPGYTYRRLLKDSLLQRPFGHHERLVTICVVSAIAAAFVLSLFISLFTCFRRQLT 60

Query: 84  SPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT--SFESRNCVICLAEFEYGDEL 143
           S SSKP SSTCS Q L++MPVYIYGDS     + YCFT  SFE RNCVICL EFE GDEL
Sbjct: 61  SASSKPPSSTCSRQ-LSSMPVYIYGDS-----APYCFTSSSFEVRNCVICLGEFELGDEL 120

Query: 144 RVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAFG 203
           RVLPNC H FHKGCIDQWLPLRSLLCPLCRE +  EI TMR+PVC+NYWARNPAF+LAF 
Sbjct: 121 RVLPNCNHAFHKGCIDQWLPLRSLLCPLCRELSTDEIGTMRKPVCTNYWARNPAFVLAFA 180

Query: 204 LGSNAPLPSQL 213
             SNAPLPSQL
Sbjct: 181 PASNAPLPSQL 185

[Close]

BLAST of PI0014851 vs. NCBI nr
Match: XP_011658497.1 (E3 ubiquitin-protein ligase RHA2B [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 4.1e-102
Identity = 184/189 (97.35%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 24  MNSVDDLGYSYRRLLKDSLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQLN 83
           MNSVDDLGYS RRLLKDSLFE PFG+RERIVTICATSAIAALFVISLFISLFTCFRRQLN
Sbjct: 1   MNSVDDLGYSNRRLLKDSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQLN 60

Query: 84  SPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRV 143
           SPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESR CVICLAEFEYGDELRV
Sbjct: 61  SPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRTCVICLAEFEYGDELRV 120

Query: 144 LPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAFGLG 203
           LPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYW+RNPAFILAFGLG
Sbjct: 121 LPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWSRNPAFILAFGLG 180

Query: 204 SNAPLPSQL 213
           SNAPLPSQL
Sbjct: 181 SNAPLPSQL 189

[Close]

BLAST of PI0014851 vs. NCBI nr
Match: XP_008440820.1 (PREDICTED: RING-H2 finger protein ATL72-like [Cucumis melo])

HSP 1 Score: 381.7 bits (979), Expect = 4.1e-102
Identity = 186/191 (97.38%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 23  NMNSVDDLGYSYRRLLKD-SLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQ 82
           NMNSVDDLGYS RRLLKD SLFE PFG+RERIVTICATSAIAALFVISLFISLFTCFRRQ
Sbjct: 10  NMNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQ 69

Query: 83  LNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDEL 142
           LNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDEL
Sbjct: 70  LNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDEL 129

Query: 143 RVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAFG 202
           RVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYWARNPAFILAFG
Sbjct: 130 RVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFG 189

Query: 203 LGSNAPLPSQL 213
           LGSNAPLPSQL
Sbjct: 190 LGSNAPLPSQL 200

[Close]

BLAST of PI0014851 vs. NCBI nr
Match: KAA0025673.1 (RING-H2 finger protein ATL72-like [Cucumis melo var. makuwa] >TYK12545.1 RING-H2 finger protein ATL72-like [Cucumis melo var. makuwa])

HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101
Identity = 185/190 (97.37%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 24  MNSVDDLGYSYRRLLKD-SLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQL 83
           MNSVDDLGYS RRLLKD SLFE PFG+RERIVTICATSAIAALFVISLFISLFTCFRRQL
Sbjct: 1   MNSVDDLGYSNRRLLKDSSLFEQPFGNRERIVTICATSAIAALFVISLFISLFTCFRRQL 60

Query: 84  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 143
           NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR
Sbjct: 61  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 120

Query: 144 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAFGL 203
           VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRP+CSNYWARNPAFILAFGL
Sbjct: 121 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPLCSNYWARNPAFILAFGL 180

Query: 204 GSNAPLPSQL 213
           GSNAPLPSQL
Sbjct: 181 GSNAPLPSQL 190

[Close]

BLAST of PI0014851 vs. NCBI nr
Match: XP_038881295.1 (RING-H2 finger protein ATL79-like [Benincasa hispida])

HSP 1 Score: 334.7 bits (857), Expect = 5.7e-88
Identity = 165/190 (86.84%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 24  MNSVDDLGYSYRRLLKDSLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQLN 83
           MNSVD LGYSYRRLLKDSLFEHPFG+RERIVTICATS IAA+FVISLFISLFTCFR QLN
Sbjct: 1   MNSVDYLGYSYRRLLKDSLFEHPFGNRERIVTICATSVIAAMFVISLFISLFTCFRHQLN 60

Query: 84  SPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT-SFESRNCVICLAEFEYGDELR 143
           SPSSKP  ST SSQ LTTMPVYIYGD SS+  SSYCFT SFE RNCVICLAEF++GDELR
Sbjct: 61  SPSSKPPPSTSSSQ-LTTMPVYIYGDVSSSPSSSYCFTSSFEPRNCVICLAEFKHGDELR 120

Query: 144 VLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAFGL 203
           VLPNCKH FHKGCIDQWL LRSLLCPLCR+HT +EI TMRRP+CSNYWARNPAFILAFGL
Sbjct: 121 VLPNCKHAFHKGCIDQWLLLRSLLCPLCRDHTTEEIGTMRRPICSNYWARNPAFILAFGL 180

Query: 204 GSNAPLPSQL 213
           GSN PLPSQL
Sbjct: 181 GSNVPLPSQL 189

[Close]

BLAST of PI0014851 vs. NCBI nr
Match: KAG6603909.1 (RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.7 bits (748), Expect = 2.5e-75
Identity = 146/192 (76.04%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 24  MNSVDDLGYSYRRLLKDSLFEHPFGSRERIVTICATSAIAALFVISLFISLFTCFRRQLN 83
           MNS    GY+YRRLLKDSL + PFG  ER+VTIC  SAIAA FV+SLFISLFTCFRRQL 
Sbjct: 1   MNSAQAPGYTYRRLLKDSLLQRPFGHHERLVTICVVSAIAAAFVLSLFISLFTCFRRQLT 60

Query: 84  SPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFT---SFESRNCVICLAEFEYGDE 143
           S SSKP SSTCS Q L++MPVYIYGDS     + YCFT   SFE+RNCVICLAEFE GDE
Sbjct: 61  SASSKPPSSTCSRQ-LSSMPVYIYGDS-----APYCFTSSSSFEARNCVICLAEFELGDE 120

Query: 144 LRVLPNCKHVFHKGCIDQWLPLRSLLCPLCREHTIKEIETMRRPVCSNYWARNPAFILAF 203
           LRVLPNCKH FHKGCIDQWLPLRSLLCPLCRE +I EI TMR+PVC+N+WARNPAF+LAF
Sbjct: 121 LRVLPNCKHAFHKGCIDQWLPLRSLLCPLCRELSIDEIGTMRKPVCTNHWARNPAFVLAF 180

Query: 204 GLGSNAPLPSQL 213
              SNAPLPSQL
Sbjct: 181 ASASNAPLPSQL 186

[Close]

BLAST of PI0014851 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 79  RRQLNSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYG 138
           R  L + S+ P        +L  +P+++Y  SS N P        E   C +CL+EFE  
Sbjct: 66  RSHLRTLSASPRDQALDQAVLDKIPIFVY--SSKNPPPPE-----EKEECSVCLSEFEEE 125

Query: 139 DELRVLPNCKHVFHKGCIDQWLPLRSLLCPLCR 172
           DE R+LP C H FH  CID W   RS  CPLCR
Sbjct: 126 DEGRLLPKCGHSFHVDCIDTWFRSRS-TCPLCR 150

[Close]

BLAST of PI0014851 vs. TAIR 10
Match: AT1G63840.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-12
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 102 MPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCIDQW-L 161
           +PV  + D   N P S C        C +CL +FE  DE+R L NC+H+FH+GC+D+W +
Sbjct: 73  LPVVRFSD--INRPESEC--------CAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMM 132

Query: 162 PLRSLLCPLCREHTIKE 178
               + CPLCR   I +
Sbjct: 133 GYNQMTCPLCRTQFIPD 139

[Close]

BLAST of PI0014851 vs. TAIR 10
Match: AT2G27940.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 7.1e-12
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 96  SQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGC 155
           SQ + ++PVY Y  ++             + +CVICL++FE G+ ++V+P+C HVFH  C
Sbjct: 118 SQAVRSLPVYRYTKAAKQ----------RNEDCVICLSDFEEGETVKVIPHCGHVFHVDC 177

Query: 156 IDQWLPLRSLLCPLCREHTI 176
           +D WL    + CPLCR + +
Sbjct: 178 VDTWLS-SYVTCPLCRSNQL 186

[Close]

BLAST of PI0014851 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 68.2 bits (165), Expect = 9.3e-12
Identity = 37/89 (41.57%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 83  NSPSSKPLSSTCSSQLLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELR 142
           +S S  PL  T    +L  +P+++Y   +   P            C +CL+EFE  DE R
Sbjct: 81  SSSSLSPLDPT----VLEKIPIFVYSVKTHESP---------LEECSVCLSEFEEDDEGR 140

Query: 143 VLPNCKHVFHKGCIDQWLPLRSLLCPLCR 172
           VLP C HVFH  CID W   RS  CPLCR
Sbjct: 141 VLPKCGHVFHVDCIDTWFRSRS-SCPLCR 155

[Close]

BLAST of PI0014851 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 98  LLTTMPVYIYGDSSSNMPSSYCFTSFESRNCVICLAEFEYGDELRVLPNCKHVFHKGCID 157
           L+  +PV++Y +              E  +C +CL EF   D+LR+LPNC H FH  CID
Sbjct: 123 LIDALPVFLYKEIKGTK---------EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCID 182

Query: 158 QWLPLRSLLCPLCR 172
            WL L +  CPLCR
Sbjct: 183 TWL-LSNSTCPLCR 186

The following BLAST results are available for this feature:

BLAST of PI0014851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22255	2.0e-11	40.86	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9SJJ7	1.0e-10	37.50	RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1	[more]
Q9LZJ6	1.3e-10	41.57	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8H7N9	2.2e-10	32.59	E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q8GW38	2.2e-10	41.89	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]

BLAST of PI0014851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKP7	7.0e-116	97.17	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505940 P...	[more]
A0A1S3B2S4	2.0e-102	97.38	RING-H2 finger protein ATL72-like OS=Cucumis melo OX=3656 GN=LOC103485128 PE=4 S...	[more]
A0A5D3CLV8	9.8e-102	97.37	RING-H2 finger protein ATL72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1GEN4	1.6e-75	76.04	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111453465 ...	[more]
A0A6J1IJG4	3.0e-74	75.39	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111477647 PE...	[more]

BLAST of PI0014851 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658497.1	4.1e-102	97.35	E3 ubiquitin-protein ligase RHA2B [Cucumis sativus]	[more]
XP_008440820.1	4.1e-102	97.38	PREDICTED: RING-H2 finger protein ATL72-like [Cucumis melo]	[more]
KAA0025673.1	2.0e-101	97.37	RING-H2 finger protein ATL72-like [Cucumis melo var. makuwa] >TYK12545.1 RING-H2...	[more]
XP_038881295.1	5.7e-88	86.84	RING-H2 finger protein ATL79-like [Benincasa hispida]	[more]
KAG6603909.1	2.5e-75	76.04	RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of PI0014851 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47560.1	1.4e-12	40.86	RING/U-box superfamily protein	[more]
AT1G63840.1	5.4e-12	40.26	RING/U-box superfamily protein	[more]
AT2G27940.1	7.1e-12	37.50	RING/U-box superfamily protein	[more]
AT3G62690.1	9.3e-12	41.57	AtL5	[more]
AT1G23980.1	1.6e-11	41.89	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 128..170 e-value: 1.4E-7 score: 41.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 127..171 e-value: 7.6E-13 score: 48.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 128..171 score: 12.031935
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 123..175 e-value: 7.6E-18 score: 65.8
None	No IPR available	PANTHER	PTHR45798:SF35	OS11G0149500 PROTEIN	coord: 6..209
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 6..209
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 127..171 e-value: 5.05245E-16 score: 67.2517
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 127..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014851.1	PI0014851.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane