PI0014718 (gene) Melon (PI 482460) v1

Overview
NamePI0014718
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionExportin-T
Locationchr05: 8511771 .. 8512218 (-)
RNA-Seq ExpressionPI0014718
SyntenyPI0014718
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTGTTAGAAAGGTATCTTGCCGCATTTAACAACTGTTATATGTTTTAGATTTTTTTTCTCCCAATGTATACACATCTCGATCGCTTTGGTTGTCTGGACTTAATAACTGTTTTCTGTGATCTAGGCGTTATGTACAGATATTCATTAAATTAATTAAAGACTGGTGTGCCCGGCCTTTAGGAGAAGAAAAGGTAACTATACCCCTTTATGCTTTCCTTGTTGAGTACGTGTTTCTTGTTCCCCGAAAAAAATGAACTCTCTTTTCATAACATGTGTTACTATTTTTTATCTTTTGAATCAGGTGCTTGGCTTTCAAAGTTTTATAATCGAAGGCTTTGCAACAAACTGTTGCTTGTACAGTGTACTTGATAAATCATTTGAATTACATGGTGCAAATACTGTGAGGATATACTATTCAGAATTCTGTTTCATTTATTATTGA

mRNA sequence

ATGTTCTTGTTAGAAAGGCGTTATGTACAGATATTCATTAAATTAATTAAAGACTGGTGTGCCCGGCCTTTAGGAGAAGAAAAGGTGCTTGGCTTTCAAAGTTTTATAATCGAAGGCTTTGCAACAAACTGTTGCTTGTACAGTGTACTTGATAAATCATTTGAATTACATGGTGCAAATACTGTGAGGATATACTATTCAGAATTCTGTTTCATTTATTATTGA

Coding sequence (CDS)

ATGTTCTTGTTAGAAAGGCGTTATGTACAGATATTCATTAAATTAATTAAAGACTGGTGTGCCCGGCCTTTAGGAGAAGAAAAGGTGCTTGGCTTTCAAAGTTTTATAATCGAAGGCTTTGCAACAAACTGTTGCTTGTACAGTGTACTTGATAAATCATTTGAATTACATGGTGCAAATACTGTGAGGATATACTATTCAGAATTCTGTTTCATTTATTATTGA

Protein sequence

MFLLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTVRIYYSEFCFIYY
Homology
[Close]
BLAST of PI0014718 vs. ExPASy Swiss-Prot
Match: Q7PC79 (Exportin-T OS=Arabidopsis thaliana OX=3702 GN=PSD PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-18
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0 

Query: 9   VQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTVRIY 66
           VQIFIKLIKDWCA P  EEKV GFQ+F+IE FATNCCLYSVLDKSF    ANT  ++
Sbjct: 858 VQIFIKLIKDWCAEPYSEEKVPGFQNFVIEAFATNCCLYSVLDKSFNFSDANTHALF 914

[Close]
BLAST of PI0014718 vs. ExPASy Swiss-Prot
Match: Q8H3A7 (Exportin-T OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0613300 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-10
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0 

Query: 9   VQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTVRIY 66
           VQ F+ LIKDWC+    E+K+ GF+ F+IE FAT CCL SVLDKSF      ++ ++
Sbjct: 851 VQTFVNLIKDWCSSSEIEDKLPGFRVFMIEKFATGCCLQSVLDKSFNFRDGISIALF 907

[Close]
BLAST of PI0014718 vs. ExPASy TrEMBL
Match: A0A6J1JUQ6 (Exportin-T OS=Cucurbita maxima OX=3661 GN=LOC111488536 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWCARP GEEKV GFQSFI+EGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIKLIKDWCARPSGEEKVPGFQSFIMEGFATNCCLYSVLDKSFELHDANTL 913

[Close]
BLAST of PI0014718 vs. ExPASy TrEMBL
Match: A0A6J1GNA6 (Exportin-T OS=Cucurbita moschata OX=3662 GN=LOC111456004 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWCARP GEEKV GFQSFI+EGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIKLIKDWCARPSGEEKVPGFQSFIMEGFATNCCLYSVLDKSFELHDANTL 913

[Close]
BLAST of PI0014718 vs. ExPASy TrEMBL
Match: A0A0A0K6Z9 (Exportin-T OS=Cucumis sativus OX=3659 GN=Csa_7G449450 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWCARP GEEKV GFQSFIIEGFATNCCLYSVLDKSFELH AN++
Sbjct: 854 LVRKACVQIFIKLIKDWCARPSGEEKVPGFQSFIIEGFATNCCLYSVLDKSFELHDANSL 913

[Close]
BLAST of PI0014718 vs. ExPASy TrEMBL
Match: A0A6J1D5T7 (Exportin-T OS=Momordica charantia OX=3673 GN=LOC111017550 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-20
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWC RP GEE+V GFQSFIIEGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIKLIKDWCTRPSGEERVPGFQSFIIEGFATNCCLYSVLDKSFELHDANTL 913

[Close]
BLAST of PI0014718 vs. ExPASy TrEMBL
Match: A0A6J1KCZ5 (Exportin-T OS=Cucurbita maxima OX=3661 GN=LOC111494490 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.2e-19
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFI+LIKDWC RP GEEKV GFQSFIIEGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIRLIKDWCDRP-GEEKVPGFQSFIIEGFATNCCLYSVLDKSFELHDANTL 912

[Close]
BLAST of PI0014718 vs. NCBI nr
Match: XP_038898562.1 (exportin-T [Benincasa hispida] >XP_038898563.1 exportin-T [Benincasa hispida])

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-20
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWCARP GEEKV GFQSFIIEGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIKLIKDWCARPSGEEKVPGFQSFIIEGFATNCCLYSVLDKSFELHDANTL 913

[Close]
BLAST of PI0014718 vs. NCBI nr
Match: XP_022992085.1 (exportin-T-like [Cucurbita maxima] >XP_022992087.1 exportin-T-like [Cucurbita maxima])

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWCARP GEEKV GFQSFI+EGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIKLIKDWCARPSGEEKVPGFQSFIMEGFATNCCLYSVLDKSFELHDANTL 913

[Close]
BLAST of PI0014718 vs. NCBI nr
Match: XP_023548548.1 (exportin-T-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWCARP GEEKV GFQSFI+EGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIKLIKDWCARPSGEEKVPGFQSFIMEGFATNCCLYSVLDKSFELHDANTL 913

[Close]
BLAST of PI0014718 vs. NCBI nr
Match: KAG6575443.1 (Exportin-T, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWCARP GEEKV GFQSFI+EGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIKLIKDWCARPSGEEKVPGFQSFIMEGFATNCCLYSVLDKSFELHDANTL 913

[Close]
BLAST of PI0014718 vs. NCBI nr
Match: XP_022953461.1 (exportin-T-like [Cucurbita moschata] >XP_022953462.1 exportin-T-like [Cucurbita moschata])

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 3   LLERRYVQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTV 62
           L+ +  VQIFIKLIKDWCARP GEEKV GFQSFI+EGFATNCCLYSVLDKSFELH ANT+
Sbjct: 854 LVRKACVQIFIKLIKDWCARPSGEEKVPGFQSFIMEGFATNCCLYSVLDKSFELHDANTL 913

[Close]
BLAST of PI0014718 vs. TAIR 10
Match: AT1G72560.1 (ARM repeat superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 7.2e-20
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0 

Query: 9   VQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTVRIY 66
           VQIFIKLIKDWCA P  EEKV GFQ+F+IE FATNCCLYSVLDKSF    ANT  ++
Sbjct: 858 VQIFIKLIKDWCAEPYSEEKVPGFQNFVIEAFATNCCLYSVLDKSFNFSDANTHALF 914

[Close]
BLAST of PI0014718 vs. TAIR 10
Match: AT1G72560.2 (ARM repeat superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 7.2e-20
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0 

Query: 9   VQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTVRIY 66
           VQIFIKLIKDWCA P  EEKV GFQ+F+IE FATNCCLYSVLDKSF    ANT  ++
Sbjct: 858 VQIFIKLIKDWCAEPYSEEKVPGFQNFVIEAFATNCCLYSVLDKSFNFSDANTHALF 914

[Close]
BLAST of PI0014718 vs. TAIR 10
Match: AT1G72560.3 (ARM repeat superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 7.2e-20
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0 

Query: 9   VQIFIKLIKDWCARPLGEEKVLGFQSFIIEGFATNCCLYSVLDKSFELHGANTVRIY 66
           VQIFIKLIKDWCA P  EEKV GFQ+F+IE FATNCCLYSVLDKSF    ANT  ++
Sbjct: 858 VQIFIKLIKDWCAEPYSEEKVPGFQNFVIEAFATNCCLYSVLDKSFNFSDANTHALF 914

The following BLAST results are available for this feature:
BLAST of PI0014718 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7PC791.0e-1873.68Exportin-T OS=Arabidopsis thaliana OX=3702 GN=PSD PE=2 SV=1[more]
Q8H3A71.3e-1050.88Exportin-T OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0613300 PE=2 SV=1[more]
BLAST of PI0014718 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JUQ61.1e-2083.33Exportin-T OS=Cucurbita maxima OX=3661 GN=LOC111488536 PE=3 SV=1[more]
A0A6J1GNA61.1e-2083.33Exportin-T OS=Cucurbita moschata OX=3662 GN=LOC111456004 PE=3 SV=1[more]
A0A0A0K6Z91.5e-2083.33Exportin-T OS=Cucumis sativus OX=3659 GN=Csa_7G449450 PE=3 SV=1[more]
A0A6J1D5T73.3e-2081.67Exportin-T OS=Momordica charantia OX=3673 GN=LOC111017550 PE=3 SV=1[more]
A0A6J1KCZ56.2e-1981.67Exportin-T OS=Cucurbita maxima OX=3661 GN=LOC111494490 PE=3 SV=1[more]
BLAST of PI0014718 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038898562.11.0e-2085.00exportin-T [Benincasa hispida] >XP_038898563.1 exportin-T [Benincasa hispida][more]
XP_022992085.12.3e-2083.33exportin-T-like [Cucurbita maxima] >XP_022992087.1 exportin-T-like [Cucurbita ma... [more]
XP_023548548.12.3e-2083.33exportin-T-like [Cucurbita pepo subsp. pepo][more]
KAG6575443.12.3e-2083.33Exportin-T, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022953461.12.3e-2083.33exportin-T-like [Cucurbita moschata] >XP_022953462.1 exportin-T-like [Cucurbita ... [more]
BLAST of PI0014718 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G72560.17.2e-2073.68ARM repeat superfamily protein [more]
AT1G72560.27.2e-2073.68ARM repeat superfamily protein [more]
AT1G72560.37.2e-2073.68ARM repeat superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0014718.1PI0014718.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071528 tRNA re-export from nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016363 nuclear matrix
cellular_component GO:0005643 nuclear pore
molecular_function GO:0031267 small GTPase binding
molecular_function GO:0000049 tRNA binding