PI0014610 (gene) Melon (PI 482460) v1

Overview
NamePI0014610
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr08: 4981964 .. 4984905 (-)
RNA-Seq ExpressionPI0014610
SyntenyPI0014610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGAAGTCCTATTCCAGAAAGAGCTCTTGTTTCCCAAGTTCTTTTAGGACTTGACGAAGATTACAATCCAGTGATAGCAACCATTCAAGCCAGGCCAACAGTCTCGTGGTTAGATATGCAGTCTGAACTGCTGTCATATGAACAGAGACTCAACTTTCAGAATTCCCAGAGAAATACAAATATTAACAATACTACTTCAGTCAATATGGTTAATGGAAGAGGAAATAGTGGTGGTCAGAAAACGCAGCCTTCACACCAAAATAATGGTGGTCGGTCAGCATCTAATGGTCAATGTGGGGGCAGAGGCCGTGGAAGAGGACACTATCGTCCAACTTGTCAGGTATGTGGAAAAATAGGACATACCGCAGATGTGTGCTACAATCAATTCAATAAGGAATTCGGTCCTCTTAACAATCAACAACATAAAAGGGAGAATCATAATGGAAATAACTTCAATGGCAAAAACTCTGCTGCAATGATGGCAACTCAAAACAACACTCCGTTCACAAATAGCATTGAAGTTAATCCTGATCAAAGTTGGTATGTTGATAGTGGGGCCTCAAATCACATCACAACTGATTACAACAATATTCAGAACCCAATTGACTACTCAGGTAAAGAATTTGTTACAGTAGGTAATTGAGGGAAGTTAAACATTAATTCTGTTGGAAATTCAAAGTTATCTGATGGGAACACCCTGCTAAAACTAAATGATGTCTTATGCATTCCAGATATTGCCAAAAATCTTAGTAGTGTATCAAAATTAGCGCAAGGTAACAAATTTTTTTTTAGTTTCATGACTGCTATTGCCTTGTAAAGGACAAGGGTACGAGTCGAGTACTTTTGAAGGGGGTCCTCAGCGAAGGCCTCTACAAGTTTGAAGATGCTGCGGTGAACTCTAAAAGTATTTTGAATGCTGTGAATATAAATAAAACTAGCTCTACGTTAGCACCTATGGTCTCCCATATCCATGTCAACAGTGTTGTTTCTAGAGTAGTATGGCATCGACGTTTGGGTCATCCATCATCACGAGTTTTTGATCTAGCACTTAAAGAATGTAATCTGAAAATGTTGAATTCTGTCACTCGTGCCAACTTGGTAAGTCTCATAATCTGTCCTTTTCTAAGTCTGATTCTCATGCTGCGAAATTATTTGATCTTGTCCATTCTGATGTTTGGGGACCAACGCCGGTTTTATCCAAAGAAGGATTTCGATACTATATCCTGTTTCTTAATAATTACAACAGGTTTTTGTGGCTATACCCTCTTCGACTTAAAAGTGATGTTGTAAGGGCTTTTAACCATTTCTTGAAAATGATTAAATTACAGTACAACACAAACATTAAGATATTTCAATCTGACAATGGAGGAGAGTACACAAAGATTCACTCTGTTTGTTCATAGATGGGTATTGCCACTCGTATGTCTTATCCTCATACTTCGGCTCAAAATGGTCGAGCAGAACGGAAACGTTGTCATGTGACTGAAATGGCTCTCAGTCTCCTTACTCAAGCTTTAATGCCCTTATTATTCTAGTGGGATGCATTTACGACTGCCACTAAACTTATCAATTGTCTTCCTACTCCTGTTTTAAATGGTAAATCCCCAATGCAACTTCTCACTGGGCAACAACCTGATATCACAAATCTAAGGGTCTTCGGATGCTTCTGCTACCCCTGCTTACACTCATATCAAGCAAATAAATTTAACTTTCATTCCAACAAATGTGTATATATTGGCCCATACTCGACTTGACATCACCTACATCGTCAATCAATTAAGTCAATTTCTCCAAGCCCCCACCGATGTTCACTGGCAAGCTGTAAAGTGTGTCCTTCGTTACATAAGTGGCACAAAACACTTTGGTCTATTCTTTCAACCCATTCTAGACACCACTGTTCAGGCCTATTCTGATGCCTAGTGGGCATCTAATGTAGACGATCGTCGATCCATGGCTGCATTTTGTGTCTTCGTGGGTAACAACATTGTCTCTTTGTCCTCCAAAAAGCAACATGTCGCTGCTAGGTCCAGTACTGAATCTAAATACTGGGCCCTGACTCATGCTTCTACTGAGATAACTTGGATTCAACAACTTCTTGTTGAAGTCTCCATGAAGCCCCTCTCTAAGCCGATCATTTAGTGCGATAACATCAGTGTGAGGGCTCTAACATCTAATCATGTGTTCCATGCTCGCACGAAACACATCGAAATTGACGTTCACTTTGTTTGTGACAAGGTGCTAAATGGCCAACTTGAAATTCGTTATGTTCCGTCCAGCAATCAGCTTGCTGACTGTATGACCAAATCTCTTACCCATTCTCAATACCAATATCTTAGAACCAAACTCGGTGTTGTTGAACTCCCCTTTCGTTTGAGGGGGGGATATGAAGGAAGAAACCAAATACAGTCAGCACAAGGAAAAGTCAATAGTCTAGTTAGCAGTACAGTCAACACAGTGCATAAATACAATTCACCACAGTTAACATTTGGATGAAAACAATCGAGAATCTTCCATTGGTTAGGAATTTTGTTATTCCTCTTCCTATCATTTTCTGCAATGTATAAAAGACTATAAATTACTTTTCTATTATTCTTTATTCTTTGGTATCTTTTGTGTGCCCTAATTAATGGGTCCTTGCTGTATAAATAGGGGTGTTTTACACCCTTGAAAGATAAGGAAATCATACACATAAATATTTCTCCATATTCTTCTATCTATCTGTTTTGTGGTTTTCTTATTTCAGAGTACGTCATGGATGAGATTCAACGATGCTCTGAGAAATTATCTCTGATTGAAAAAGAAAGCTTACCATTGGTCATTGAGGAATCTAAGTTTCAGTTGGATATTGCTCACTTACGTCTATGTGTGGCGGCCAAAATCCTCTCTACAAAGCGAGCTAACATTGAAGCTTTCTACTCAGTTTTGAAAACGATTTGA

mRNA sequence

ATGGCTGGAAGTCCTATTCCAGAAAGAGCTCTTGTTTCCCAAGTTCTTTTAGGACTTGACGAAGATTACAATCCAGTGATAGCAACCATTCAAGCCAGGCCAACAGTCTCGTGGTTAGATATGCAGTCTGAACTGCTGTCATATGAACAGAGACTCAACTTTCAGAATTCCCAGAGAAATACAAATATTAACAATACTACTTCAGTCAATATGGTTAATGGAAGAGGAAATAGTGGTGGTCAGAAAACGCAGCCTTCACACCAAAATAATGGTGGTCGGTCAGCATCTAATGGTCAATGTGGGGGCAGAGGCCGTGGAAGAGGACACTATCGTCCAACTTGTCAGGTATGTGGAAAAATAGGACATACCGCAGATGTGTGCTACAATCAATTCAATAAGGAATTCGGTCCTCTTAACAATCAACAACATAAAAGGGAGAATCATAATGGAAATAACTTCAATGGCAAAAACTCTGCTGCAATGATGGCAACTCAAAACAACACTCCGTTCACAAATAGCATTGAAGTTAATCCTGATCAAAGTTGGTATGTTGATAGTGGGGCCTCAAATCACATCACAACTGATTACAACAATATTCAGAACCCAATTGACTACTCAGGTAAAGAATTTGTTACAGTAGAGTACGTCATGGATGAGATTCAACGATGCTCTGAGAAATTATCTCTGATTGAAAAAGAAAGCTTACCATTGGTCATTGAGGAATCTAAGTTTCAGTTGGATATTGCTCACTTACGTCTATGTGTGGCGGCCAAAATCCTCTCTACAAAGCGAGCTAACATTGAAGCTTTCTACTCAGTTTTGAAAACGATTTGA

Coding sequence (CDS)

ATGGCTGGAAGTCCTATTCCAGAAAGAGCTCTTGTTTCCCAAGTTCTTTTAGGACTTGACGAAGATTACAATCCAGTGATAGCAACCATTCAAGCCAGGCCAACAGTCTCGTGGTTAGATATGCAGTCTGAACTGCTGTCATATGAACAGAGACTCAACTTTCAGAATTCCCAGAGAAATACAAATATTAACAATACTACTTCAGTCAATATGGTTAATGGAAGAGGAAATAGTGGTGGTCAGAAAACGCAGCCTTCACACCAAAATAATGGTGGTCGGTCAGCATCTAATGGTCAATGTGGGGGCAGAGGCCGTGGAAGAGGACACTATCGTCCAACTTGTCAGGTATGTGGAAAAATAGGACATACCGCAGATGTGTGCTACAATCAATTCAATAAGGAATTCGGTCCTCTTAACAATCAACAACATAAAAGGGAGAATCATAATGGAAATAACTTCAATGGCAAAAACTCTGCTGCAATGATGGCAACTCAAAACAACACTCCGTTCACAAATAGCATTGAAGTTAATCCTGATCAAAGTTGGTATGTTGATAGTGGGGCCTCAAATCACATCACAACTGATTACAACAATATTCAGAACCCAATTGACTACTCAGGTAAAGAATTTGTTACAGTAGAGTACGTCATGGATGAGATTCAACGATGCTCTGAGAAATTATCTCTGATTGAAAAAGAAAGCTTACCATTGGTCATTGAGGAATCTAAGTTTCAGTTGGATATTGCTCACTTACGTCTATGTGTGGCGGCCAAAATCCTCTCTACAAAGCGAGCTAACATTGAAGCTTTCTACTCAGTTTTGAAAACGATTTGA

Protein sequence

MAGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPIDYSGKEFVTVEYVMDEIQRCSEKLSLIEKESLPLVIEESKFQLDIAHLRLCVAAKILSTKRANIEAFYSVLKTI
Homology
BLAST of PI0014610 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-06
Identity = 62/230 (26.96%), Postives = 102/230 (44.35%), Query Frame = 0

Query: 1   MAGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWL-DMQSELLSYEQRL------- 60
           + G P+     V +VL  L E+Y PVI  I A+ T   L ++   LL++E ++       
Sbjct: 158 LLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSAT 217

Query: 61  ---------NFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCGGR 120
                    + +N+    N NN    N  + R N+   K  P  Q++     +N Q    
Sbjct: 218 VIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSK--PWQQSSTNFHPNNNQ---- 277

Query: 121 GRGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKNSAAMMA 180
                 Y   CQ+CG  GH+A  C +Q       +N+QQ        + F      A +A
Sbjct: 278 ---SKPYLGKCQICGVQGHSAKRC-SQLQHFLSSVNSQQPP------SPFTPWQPRANLA 337

Query: 181 TQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPIDYSGKEFVTV 214
               +P++++       +W +DSGA++HIT+D+NN+     Y+G + V V
Sbjct: 338 L--GSPYSSN-------NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV 362

BLAST of PI0014610 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 63/219 (28.77%), Postives = 96/219 (43.84%), Query Frame = 0

Query: 1   MAGSPIPERALVSQVLLGLDEDYNPVIATIQARPT-VSWLDMQSELLSYEQRLNFQNSQR 60
           + G P+     V +VL  L +DY PVI  I A+ T  S  ++   L++ E +L   NS  
Sbjct: 139 LLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAE 198

Query: 61  NTNIN-NTTSVNMVNGRGNSGGQKTQPSHQNNGGRSAS--NGQCGGRGRGR--GHYRPTC 120
              I  N  +    N   N   +    ++ NN  RS S      G R   R    Y   C
Sbjct: 199 VVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRC 258

Query: 121 QVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSI 180
           Q+C   GH+A  C      +F    NQQ      + + F      A +A   N+P+  + 
Sbjct: 259 QICSVQGHSAKRCPQL--HQFQSTTNQQ-----QSTSPFTPWQPRANLAV--NSPYNAN- 318

Query: 181 EVNPDQSWYVDSGASNHITTDYNNIQNPIDYSGKEFVTV 214
                 +W +DSGA++HIT+D+NN+     Y+G + V +
Sbjct: 319 ------NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMI 341

BLAST of PI0014610 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 8.4e-37
Identity = 98/219 (44.75%), Postives = 140/219 (63.93%), Query Frame = 0

Query: 2   AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT 61
           AGSP+P+RA +SQ LLGLDE YNPVIA IQ +P +SW+DMQSELL++E+RL  Q++Q+NT
Sbjct: 108 AGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQKNT 167

Query: 62  NINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCG------GRGRGRGHYRPTCQ 121
                  VN+   R +S  +K      +   R+ S GQ G      GRG+GRG+ +PTCQ
Sbjct: 168 ENIIQNVVNIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGKGRGN-KPTCQ 227

Query: 122 VCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSI 181
           VC K GH+A VCYN+FNKEF  PL   +        +NF+  ++  ++ T  +     + 
Sbjct: 228 VCEKYGHSALVCYNRFNKEFLSPLVQDR----GAQSSNFSKHSNLTVLVTGQSVNQFATA 287

Query: 182 EVNPDQSWYVDSGASNHITTDYNNIQNPIDYSGKEFVTV 214
           +   + +WY+DSGA+NH+T +Y+N+ NP +YSG E + V
Sbjct: 288 DTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEKIMV 321

BLAST of PI0014610 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.7e-34
Identity = 99/212 (46.70%), Postives = 130/212 (61.32%), Query Frame = 0

Query: 3   GSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT- 62
           GSP+P RAL+SQVLLGLDE YN VI  IQ +P +SWLDMQS+LL +E+ L  QN+Q+   
Sbjct: 191 GSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKILKHQNTQKKKK 250

Query: 63  ---NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGRGRGHYRPTCQVC 122
              NI  + ++NM   R    GQ+   + +  G  R   +GQ G    G     PTCQ+C
Sbjct: 251 KKGNITQSPALNMAQ-RFALNGQRNHSNKKFYGYNRQHFSGQRGNLNNG-----PTCQLC 310

Query: 123 GKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEV 182
           GK GH+A VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V
Sbjct: 311 GKYGHSALVCYNRFNKEFSSPL---VQDRNEHSSNGSVSPNPAVFVSTQNATPFATPDTV 370

Query: 183 NPDQSWYVDSGASNHITTDYNNIQNPIDYSGK 209
             D +WY+DSGA+NH+T + +N+ NP +YSG+
Sbjct: 371 -VDPNWYIDSGATNHVTRECSNMTNPTEYSGQ 392

BLAST of PI0014610 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.6e-30
Identity = 96/209 (45.93%), Postives = 126/209 (60.29%), Query Frame = 0

Query: 9   RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNT 68
           R ++     GLDE YN VI  IQ +P +SWLDMQS+LL +E+RL  QN+Q +NT NI  +
Sbjct: 160 RQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 219

Query: 69  TSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGRGRGHYRPTCQVCGKIGHTAD 128
            ++NM   R    GQ+ Q + +  G  R   +GQ G    G     PTCQ+CGK GH+A 
Sbjct: 220 PALNMAQ-RFALNGQRNQSNKKFYGYNRQHFSGQRGNLNNG-----PTCQLCGKYGHSAL 279

Query: 129 VCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYV 188
           VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V  D +WY+
Sbjct: 280 VCYNRFNKEFSSPL---VQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTV-VDPNWYI 339

Query: 189 DSGASNHITTDYNNIQNPIDYSGKEFVTV 214
           DSGA+NH+T + +N+ NP +YSG E VTV
Sbjct: 340 DSGATNHVTRECSNMTNPTEYSGIEKVTV 358

BLAST of PI0014610 vs. ExPASy TrEMBL
Match: A0A1S4E1V2 (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28
Identity = 92/204 (45.10%), Postives = 123/204 (60.29%), Query Frame = 0

Query: 9   RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNT 68
           R ++     GLDE YN VI  IQ +P +SWLDMQS+LL +E+RL  QN+Q +NT NI  +
Sbjct: 160 RQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 219

Query: 69  TSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGRGRGHYRPTCQVCGKIGHTAD 128
            ++NM   R    GQ+ Q + +  G  R   +GQ G    G     PTCQ+CGK GH+A 
Sbjct: 220 PALNMAQ-RFALNGQRNQSNKKFYGYNRQHFSGQRGNLNNG-----PTCQLCGKYGHSAL 279

Query: 129 VCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYV 188
           VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V  D +WY+
Sbjct: 280 VCYNRFNKEFSSPL---VQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTV-VDPNWYI 339

Query: 189 DSGASNHITTDYNNIQNPIDYSGK 209
           DSGA+NH+T + +N+ NP +YSG+
Sbjct: 340 DSGATNHVTRECSNMTNPTEYSGQ 353

BLAST of PI0014610 vs. ExPASy TrEMBL
Match: A0A5D3BWB6 (Putative Ty1-copia-like retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00030 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-28
Identity = 79/158 (50.00%), Postives = 103/158 (65.19%), Query Frame = 0

Query: 2   AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT 61
           A S +P R L+SQVLLGL E+YN V+AT+Q +P +S + MQSELL YE+RL  QN+ +  
Sbjct: 81  ADSLVPTRILISQVLLGLYEEYNAVVATLQGKPELSLVQMQSELLPYEKRLEAQNAHKTV 140

Query: 62  NINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCGGRG--RGRGHYRPTCQVCGK 121
            + NT +VNMV+ RG S     +   + N   + + G  GG+   RGRG YRPTCQVCGK
Sbjct: 141 PLYNTRTVNMVSNRGPSNHSSRKVKVEGNNFSTGNRGNNGGQSKVRGRGRYRPTCQVCGK 200

Query: 122 IGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKN 158
           IG+  DVCYN+FNKEF P NN  +  +  N N+F   N
Sbjct: 201 IGYITDVCYNRFNKEFAP-NNGNNPNKGTNNNSFKNNN 237

BLAST of PI0014610 vs. NCBI nr
Match: XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-38
Identity = 104/217 (47.93%), Postives = 140/217 (64.52%), Query Frame = 0

Query: 2   AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT 61
           AGSP+P R LVSQVLLGLDE+YN ++A IQ R  +SWLDMQSELL YE+RL  Q++Q+ T
Sbjct: 131 AGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERRLEHQSNQKTT 190

Query: 62  ---NINNTTSVNMVNGRGNSGGQKTQPSHQN-NGGRSASNGQCGGRGRGRGHYRPTCQVC 121
              N  +  SVNM N R  +   KT  S+Q+  GG+    G   GRGRGR + +P CQVC
Sbjct: 191 VGFNQISNASVNMTNTRHVNQNNKTNSSNQSIGGGQRGGGGHGRGRGRGRNNKKPVCQVC 250

Query: 122 GKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNG--KNSAAMMATQNNTPFTNSIE 181
           GK+GH A  C+N+++++F P N+ Q+K E    N       +  A+     + PF    E
Sbjct: 251 GKVGHIAFYCFNRYSRDFVP-NSPQNKVEPFPNNQTKNTQPHPTALAIAYGSNPFLTRQE 310

Query: 182 VNPDQSWYVDSGASNHITTDYNNIQNPIDYSGKEFVT 213
              D +WY DSGASNH+T+D+NN+ NPI+YSG+ + T
Sbjct: 311 NMTDANWY-DSGASNHVTSDFNNLGNPIEYSGQAYET 345

BLAST of PI0014610 vs. NCBI nr
Match: XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida])

HSP 1 Score: 169.1 bits (427), Expect = 5.4e-38
Identity = 103/212 (48.58%), Postives = 137/212 (64.62%), Query Frame = 0

Query: 2   AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT 61
           AGSP+P R LVSQVLLGLDE+YN ++A IQ R  +SWLDMQSELL YE+RL  Q++Q+ T
Sbjct: 131 AGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERRLEHQSNQKTT 190

Query: 62  ---NINNTTSVNMVNGRGNSGGQKTQPSHQN-NGGRSASNGQCGGRGRGRGHYRPTCQVC 121
              N  +  SVNM N R  +   KT  S+Q+  GG+    G   GRGRGR + +P CQVC
Sbjct: 191 VGFNQISNASVNMTNTRHVNQNNKTNSSNQSIGGGQRGGGGHGRGRGRGRNNKKPVCQVC 250

Query: 122 GKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNG--KNSAAMMATQNNTPFTNSIE 181
           GK+GH A  C+N+++++F P N+ Q+K E    N       +  A+     + PF    E
Sbjct: 251 GKVGHIAFYCFNRYSRDFVP-NSPQNKVEPFPNNQTKNTQPHPTALAIAYGSNPFLTRQE 310

Query: 182 VNPDQSWYVDSGASNHITTDYNNIQNPIDYSG 208
              D +WY DSGASNH+T+D+NN+ NPI+YSG
Sbjct: 311 NMTDANWY-DSGASNHVTSDFNNLGNPIEYSG 340

BLAST of PI0014610 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-36
Identity = 98/219 (44.75%), Postives = 140/219 (63.93%), Query Frame = 0

Query: 2   AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT 61
           AGSP+P+RA +SQ LLGLDE YNPVIA IQ +P +SW+DMQSELL++E+RL  Q++Q+NT
Sbjct: 108 AGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQKNT 167

Query: 62  NINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCG------GRGRGRGHYRPTCQ 121
                  VN+   R +S  +K      +   R+ S GQ G      GRG+GRG+ +PTCQ
Sbjct: 168 ENIIQNVVNIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGKGRGN-KPTCQ 227

Query: 122 VCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSI 181
           VC K GH+A VCYN+FNKEF  PL   +        +NF+  ++  ++ T  +     + 
Sbjct: 228 VCEKYGHSALVCYNRFNKEFLSPLVQDR----GAQSSNFSKHSNLTVLVTGQSVNQFATA 287

Query: 182 EVNPDQSWYVDSGASNHITTDYNNIQNPIDYSGKEFVTV 214
           +   + +WY+DSGA+NH+T +Y+N+ NP +YSG E + V
Sbjct: 288 DTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEKIMV 321

BLAST of PI0014610 vs. NCBI nr
Match: KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-33
Identity = 99/212 (46.70%), Postives = 130/212 (61.32%), Query Frame = 0

Query: 3   GSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT- 62
           GSP+P RAL+SQVLLGLDE YN VI  IQ +P +SWLDMQS+LL +E+ L  QN+Q+   
Sbjct: 191 GSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKILKHQNTQKKKK 250

Query: 63  ---NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGRGRGHYRPTCQVC 122
              NI  + ++NM   R    GQ+   + +  G  R   +GQ G    G     PTCQ+C
Sbjct: 251 KKGNITQSPALNMAQ-RFALNGQRNHSNKKFYGYNRQHFSGQRGNLNNG-----PTCQLC 310

Query: 123 GKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEV 182
           GK GH+A VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V
Sbjct: 311 GKYGHSALVCYNRFNKEFSSPL---VQDRNEHSSNGSVSPNPAVFVSTQNATPFATPDTV 370

Query: 183 NPDQSWYVDSGASNHITTDYNNIQNPIDYSGK 209
             D +WY+DSGA+NH+T + +N+ NP +YSG+
Sbjct: 371 -VDPNWYIDSGATNHVTRECSNMTNPTEYSGQ 392

BLAST of PI0014610 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-29
Identity = 96/209 (45.93%), Postives = 126/209 (60.29%), Query Frame = 0

Query: 9   RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNT 68
           R ++     GLDE YN VI  IQ +P +SWLDMQS+LL +E+RL  QN+Q +NT NI  +
Sbjct: 160 RQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQS 219

Query: 69  TSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGRGRGHYRPTCQVCGKIGHTAD 128
            ++NM   R    GQ+ Q + +  G  R   +GQ G    G     PTCQ+CGK GH+A 
Sbjct: 220 PALNMAQ-RFALNGQRNQSNKKFYGYNRQHFSGQRGNLNNG-----PTCQLCGKYGHSAL 279

Query: 129 VCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYV 188
           VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V  D +WY+
Sbjct: 280 VCYNRFNKEFSSPL---VQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTV-VDPNWYI 339

Query: 189 DSGASNHITTDYNNIQNPIDYSGKEFVTV 214
           DSGA+NH+T + +N+ NP +YSG E VTV
Sbjct: 340 DSGATNHVTRECSNMTNPTEYSGIEKVTV 358

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94HW23.3e-0626.96Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.2e-0528.77Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A5D3C3738.4e-3744.75Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7SIT78.7e-3446.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S4E1U67.6e-3045.93uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4E1V21.4e-2845.10uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3BWB63.2e-2850.00Putative Ty1-copia-like retrotransposon OS=Cucumis melo var. makuwa OX=1194695 G... [more]
Match NameE-valueIdentityDescription
XP_038905164.11.1e-3847.93uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida][more]
XP_038905161.15.4e-3848.58uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida][more]
TYK05754.11.7e-3644.75Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0026100.11.8e-3346.70uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa][more]
XP_016902197.11.6e-2945.93PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..105
NoneNo IPR availablePANTHERPTHR34222:SF48SUBFAMILY NOT NAMEDcoord: 11..213
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 11..213

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0014610.1PI0014610.1mRNA