PI0014601 (gene) Melon (PI 482460) v1

Overview


Name	PI0014601
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	VID27-like protein
Location	chr04: 2387611 .. 2388260 (+)
RNA-Seq Expression	PI0014601
Synteny	PI0014601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCTTCTTATTCTTCACTGCCAATTTTCTCTCATCCTCTGTTTTCAGCTCTTCTCTCTTTCTTCACTCTCATTCTCCTCTTATTTCCTCCTTTTCTCTGGACATCCCTCCTCTCTCCGGCGGTTCTCCTCGCCGGATTTCTCTTTCTCTCCCTCCTCCGCCTCGGCACAACTCAACGCCAACGCCAACCCATCACCACCACCAACCCCCAATCCATCAAATTTACTCAACCAACAGAACACTGTAGTGGTTCTCCCATTTCTTCCTGCTTCGAGGAATCTTTCGTACAATGGAATGTCAGAGCGCCGTTGGAGGTTATTTACGAAGACTACGAGGAAGAGGAAAAGAAGAAGAAGGTGAAGATGAGGATAAGGATGCTGGGGCGGTACTACACATGGGATCAAATTCAATGGAGAGGTATCCTTCTCTGTCGCTGTATTATCCGGAAACGGACTCCGATAGCTCGTCGGCGGCGGATGATGAGATGGAGAATGTGTGTTTTATGTGGGATGATGAAGATAGGGATGAACTCATCGAGATTGCTTTGGATAAGAAGAGAGTATCATCGGAGTTTTTTCAGTTGGAGGAGGAGAATTTGATCGAGATTGATATTTCTCCAACCGCTTTCCCAATGTTTATTTAA

mRNA sequence

ATGTCTTCTTCTTCTTATTCTTCACTGCCAATTTTCTCTCATCCTCTGTTTTCAGCTCTTCTCTCTTTCTTCACTCTCATTCTCCTCTTATTTCCTCCTTTTCTCTGGACATCCCTCCTCTCTCCGGCGGTTCTCCTCGCCGGATTTCTCTTTCTCTCCCTCCTCCGCCTCGGCACAACTCAACGCCAACGCCAACCCATCACCACCACCAACCCCCAATCCATCAAATTTACTCAACCAACAGAACACTGTAGTGGTTCTCCCATTTCTTCCTGCTTCGAGGAATCTTTCGTACAATGGAATGTCAGAGCGCCGTTGGAGGTTATTTACGAAGACTACGAGGAAGAGGAAAAGAAGAAGAAGAGGTATCCTTCTCTGTCGCTGTATTATCCGGAAACGGACTCCGATAGCTCGTCGGCGGCGGATGATGAGATGGAGAATGTGTGTTTTATGTGGGATGATGAAGATAGGGATGAACTCATCGAGATTGCTTTGGATAAGAAGAGAGTATCATCGGAGTTTTTTCAGTTGGAGGAGGAGAATTTGATCGAGATTGATATTTCTCCAACCGCTTTCCCAATGTTTATTTAA

Coding sequence (CDS)

ATGTCTTCTTCTTCTTATTCTTCACTGCCAATTTTCTCTCATCCTCTGTTTTCAGCTCTTCTCTCTTTCTTCACTCTCATTCTCCTCTTATTTCCTCCTTTTCTCTGGACATCCCTCCTCTCTCCGGCGGTTCTCCTCGCCGGATTTCTCTTTCTCTCCCTCCTCCGCCTCGGCACAACTCAACGCCAACGCCAACCCATCACCACCACCAACCCCCAATCCATCAAATTTACTCAACCAACAGAACACTGTAGTGGTTCTCCCATTTCTTCCTGCTTCGAGGAATCTTTCGTACAATGGAATGTCAGAGCGCCGTTGGAGGTTATTTACGAAGACTACGAGGAAGAGGAAAAGAAGAAGAAGAGGTATCCTTCTCTGTCGCTGTATTATCCGGAAACGGACTCCGATAGCTCGTCGGCGGCGGATGATGAGATGGAGAATGTGTGTTTTATGTGGGATGATGAAGATAGGGATGAACTCATCGAGATTGCTTTGGATAAGAAGAGAGTATCATCGGAGTTTTTTCAGTTGGAGGAGGAGAATTTGATCGAGATTGATATTTCTCCAACCGCTTTCCCAATGTTTATTTAA

Protein sequence

MSSSSYSSLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQRQRQPITTTNPQSIKFTQPTEHCSGSPISSCFEESFVQWNVRAPLEVIYEDYEEEEKKKKRYPSLSLYYPETDSDSSSAADDEMENVCFMWDDEDRDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

Homology

[Close]

BLAST of PI0014601 vs. ExPASy TrEMBL
Match: A0A0A0KLD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516950 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 175/230 (76.09%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 4   SSYSSLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQRQ 63
           SS SSL IFSHPLFSALLSFFTLILL FPPFLWTSLLSPA++LAGFLFLSLLRLG TQRQ
Sbjct: 2   SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPALVLAGFLFLSLLRLGATQRQ 61

Query: 64  R----QPITTTNPQSIKFTQPTEHCSG-SPISSCFEESFVQWNVRAPLEVIYEDYEEEEK 123
           R    QPIT TNPQ IKFTQP EHC+G SPISSCFEESFVQWNVRAPLEVIYEDYEEE++
Sbjct: 62  RQRQHQPITITNPQPIKFTQPPEHCTGCSPISSCFEESFVQWNVRAPLEVIYEDYEEEDE 121

Query: 124 KK--------------------------------KRYPSLSLYYPETDSDSSSAADDEME 183
           ++                                +RYPSLSLYYPETDSDS S A+DEME
Sbjct: 122 EEEEEEEKEEGEVEVDEDKDKDDGTVLHMRLNSMERYPSLSLYYPETDSDSWSGAEDEME 181

Query: 184 NVCFMWDDEDRDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI 197
           NVCFMWDDEDRDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
Sbjct: 182 NVCFMWDDEDRDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI 231

[Close]

BLAST of PI0014601 vs. ExPASy TrEMBL
Match: A0A1S3B395 (VID27-like protein OS=Cucumis melo OX=3656 GN=LOC103485313 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.6e-77
Identity = 173/231 (74.89%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 2   SSSSYSSLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQ 61
           SSSS SSL IFSHPLFSALLSFFTLILL FPPFLWTSLLSP++LLAGFLFLSLLRLG TQ
Sbjct: 5   SSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQ 64

Query: 62  RQRQPITTTNPQSIKFTQPTEHCSGSPISSCFEESFVQWNVRAPLEVIYEDYEEEEKKK- 121
           R+ QPIT TNPQSIK TQP EH SGSPISSCFEESFVQWNVRAPLEVIYE YEEEE+++ 
Sbjct: 65  REHQPITITNPQSIKLTQPPEHWSGSPISSCFEESFVQWNVRAPLEVIYEVYEEEEEEEE 124

Query: 122 ---------------------------------KRYPSLSLYYPETDSDSSS-AADDEME 181
                                            +RYPSLSLYYPETDSDSSS AA DEME
Sbjct: 125 EEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEME 184

Query: 182 NVCFMWDDEDRD-ELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI 197
           NVCFMWDDEDRD ELIEIALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Sbjct: 185 NVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV 235

[Close]

BLAST of PI0014601 vs. ExPASy TrEMBL
Match: A0A6J1CME6 (uncharacterized protein LOC111012458 OS=Momordica charantia OX=3673 GN=LOC111012458 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39
Identity = 121/239 (50.63%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 8   SLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQRQRQPI 67
           ++  FS PLFS LL+FF LILL FP   W  L SP  LL G L LSLLRLG TQR  + I
Sbjct: 7   TISCFSDPLFSTLLTFFALILLSFPRIFWPLLFSPVPLLTGLLLLSLLRLGATQRFPRHI 66

Query: 68  TTTN-------PQSIKFTQPTEHCSGSPIS-----------------SCFEESFVQWNVR 127
              N        ++     P E   G   +                 +CFEESFVQWNVR
Sbjct: 67  KDKNQIESEIGSRAAAVVPPEEEDRGRDDAVVSKLGGGGGICDIVSCACFEESFVQWNVR 126

Query: 128 APLEVIYEDYEEEEKKK--------------------KRYPSLSLYYPETDSDSSS---- 187
           APLEVIYE+YE E+ K                     +RYPSLSLYYPETDSDSSS    
Sbjct: 127 APLEVIYEEYEGEDDKDVSNESDPFTETEPRPVPVRIERYPSLSLYYPETDSDSSSDDEF 186

Query: 188 ---AADDEMENVCFMWDD-EDRDELIEIALD----KKRVSSEFFQLEEENLIEIDISPT 191
               A D ++++CFMWDD EDRDELIEIALD    K + SSE FQLEEENLIEIDISPT
Sbjct: 187 PIPGAWDSLDSLCFMWDDGEDRDELIEIALDKTTNKMKASSELFQLEEENLIEIDISPT 245

[Close]

BLAST of PI0014601 vs. ExPASy TrEMBL
Match: A0A6J1EEY1 (uncharacterized protein LOC111433544 OS=Cucurbita moschata OX=3662 GN=LOC111433544 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38
Identity = 120/238 (50.42%), Postives = 135/238 (56.72%), Query Frame = 0


Query: 2   SSSSYSSLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQ 61
           S++   S+ I S PLFS LLSFF L LL FP  LW  L SP  LL GFL LSLLRLG TQ
Sbjct: 22  SNTPTVSISITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQ 81

Query: 62  RQRQPITTTNPQSIKFTQPTE---------------------HCSGSPISSCFEESFVQW 121
           R     T+ N   I+  +  E                      C+ S   +CFEESFVQW
Sbjct: 82  RSFLRQTSDNNNQIECEESAESVAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQW 141

Query: 122 NVRAPLEVIYEDYEEEEKKK-----------------KRYPSLSLYYPETDSDSSSAA-- 181
           NVRAPLEVIYE+YE E+  K                 +RYPSLSLYYPETDSDSSS    
Sbjct: 142 NVRAPLEVIYEEYEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNF 201

Query: 182 ------DDEMENVCFMWD-DEDRDELIEIALDKKRVSSEFFQLEEENL--IEIDISPT 191
                 D   +N+C MWD DEDRDELIEIALDK    +  F LEE+NL  IEIDISPT
Sbjct: 202 PRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLEEDNLIEIEIDISPT 259

[Close]

BLAST of PI0014601 vs. ExPASy TrEMBL
Match: A0A6J1KY66 (uncharacterized protein LOC111497433 OS=Cucurbita maxima OX=3661 GN=LOC111497433 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 7.8e-37
Identity = 122/246 (49.59%), Postives = 135/246 (54.88%), Query Frame = 0


Query: 1   MSSSSYS--------SLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFL 60
           MSSSS S        S+ I S PL S LLSFF L LL FP  LW  L SP  LL GFL L
Sbjct: 13  MSSSSSSSSSNTPTVSISITSDPLLSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLL 72

Query: 61  SLLRLGTTQRQRQPITTTNPQSIKFTQPTEH---------------------CSGSPISS 120
           SLLRLG TQR     T  N   I+  +  E+                     C+ S    
Sbjct: 73  SLLRLGATQRSFLRQTNDNNNQIECEESAENDAAVQSESSTAVSESVSGGSKCADSVSCK 132

Query: 121 CFEESFVQWNVRAPLEVIYEDYEEEEKKK-----------------KRYPSLSLYYPETD 180
           CFEESFVQWNVRAPLEVIYE+YE E+  K                 +RYPSLSLYYPETD
Sbjct: 133 CFEESFVQWNVRAPLEVIYEEYEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETD 192

Query: 181 SDSSSAA--------DDEMENVCFMWD-DEDRDELIEIALDKKRVSSEFFQLEEENL--I 190
           SDSSS          D   +++C MWD DEDRDELIEIALDK    +  F LEE+NL  I
Sbjct: 193 SDSSSEDNFPTTGDWDSLDDHLCLMWDEDEDRDELIEIALDKTNKKASEFLLEEDNLIEI 252

[Close]

BLAST of PI0014601 vs. NCBI nr
Match: XP_011658193.1 (uncharacterized protein LOC105435960 [Cucumis sativus] >KGN49187.1 hypothetical protein Csa_003536 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 2.4e-80
Identity = 175/230 (76.09%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 4   SSYSSLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQRQ 63
           SS SSL IFSHPLFSALLSFFTLILL FPPFLWTSLLSPA++LAGFLFLSLLRLG TQRQ
Sbjct: 2   SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPALVLAGFLFLSLLRLGATQRQ 61

Query: 64  R----QPITTTNPQSIKFTQPTEHCSG-SPISSCFEESFVQWNVRAPLEVIYEDYEEEEK 123
           R    QPIT TNPQ IKFTQP EHC+G SPISSCFEESFVQWNVRAPLEVIYEDYEEE++
Sbjct: 62  RQRQHQPITITNPQPIKFTQPPEHCTGCSPISSCFEESFVQWNVRAPLEVIYEDYEEEDE 121

Query: 124 KK--------------------------------KRYPSLSLYYPETDSDSSSAADDEME 183
           ++                                +RYPSLSLYYPETDSDS S A+DEME
Sbjct: 122 EEEEEEEKEEGEVEVDEDKDKDDGTVLHMRLNSMERYPSLSLYYPETDSDSWSGAEDEME 181

Query: 184 NVCFMWDDEDRDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI 197
           NVCFMWDDEDRDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
Sbjct: 182 NVCFMWDDEDRDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI 231

[Close]

BLAST of PI0014601 vs. NCBI nr
Match: XP_008441085.2 (PREDICTED: VID27-like protein, partial [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 5.5e-77
Identity = 173/231 (74.89%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 2   SSSSYSSLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQ 61
           SSSS SSL IFSHPLFSALLSFFTLILL FPPFLWTSLLSP++LLAGFLFLSLLRLG TQ
Sbjct: 5   SSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQ 64

Query: 62  RQRQPITTTNPQSIKFTQPTEHCSGSPISSCFEESFVQWNVRAPLEVIYEDYEEEEKKK- 121
           R+ QPIT TNPQSIK TQP EH SGSPISSCFEESFVQWNVRAPLEVIYE YEEEE+++ 
Sbjct: 65  REHQPITITNPQSIKLTQPPEHWSGSPISSCFEESFVQWNVRAPLEVIYEVYEEEEEEEE 124

Query: 122 ---------------------------------KRYPSLSLYYPETDSDSSS-AADDEME 181
                                            +RYPSLSLYYPETDSDSSS AA DEME
Sbjct: 125 EEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEME 184

Query: 182 NVCFMWDDEDRD-ELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI 197
           NVCFMWDDEDRD ELIEIALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Sbjct: 185 NVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV 235

[Close]

BLAST of PI0014601 vs. NCBI nr
Match: XP_038883304.1 (uncharacterized protein LOC120074292 [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 6.1e-52
Identity = 141/212 (66.51%), Postives = 153/212 (72.17%), Query Frame = 0


Query: 13  SHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQRQ-RQPITTTN 72
           SHPLFS LLSF  LILL FP FLWTSLLSP VLLAG LFLSLLRLG TQ Q  Q  +  +
Sbjct: 7   SHPLFSTLLSFSALILLYFPAFLWTSLLSPPVLLAGLLFLSLLRLGATQCQISQLQSNLS 66

Query: 73  PQSIKFTQPTEHCSGSPISS----CFEESFVQWNVRAPLEVIYEDYEEEEKKKKR----- 132
           PQ     Q ++  S +PISS     FE+SFVQWNVRAPLEVIYEDYEEEE++++      
Sbjct: 67  PQ-----QESQASSPAPISSSASASFEKSFVQWNVRAPLEVIYEDYEEEEEEEEAQDNKD 126

Query: 133 ------------YPSLSLYYPETDSDSSSAADDEMENVCFMWD--DEDRDELIEIALD-- 192
                       YPSLSLYYPETDSDSSS   DEMENVCFMWD  DEDRDELIEI LD  
Sbjct: 127 DPEPRRTRSIQWYPSLSLYYPETDSDSSSV--DEMENVCFMWDEEDEDRDELIEIDLDNK 186

Query: 193 KKRVSSEFFQL--EEENLIEIDISPTAFPMFI 197
           KK+  SEFFQL  EE+NLIEIDISPTAFPMFI
Sbjct: 187 KKKPPSEFFQLEPEEDNLIEIDISPTAFPMFI 211

[Close]

BLAST of PI0014601 vs. NCBI nr
Match: XP_022142309.1 (uncharacterized protein LOC111012458 [Momordica charantia] >XP_022142310.1 uncharacterized protein LOC111012458 [Momordica charantia] >XP_022142311.1 uncharacterized protein LOC111012458 [Momordica charantia] >XP_022142312.1 uncharacterized protein LOC111012458 [Momordica charantia] >XP_022142313.1 uncharacterized protein LOC111012458 [Momordica charantia] >XP_022142315.1 uncharacterized protein LOC111012458 [Momordica charantia] >XP_022142316.1 uncharacterized protein LOC111012458 [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 2.7e-39
Identity = 121/239 (50.63%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 8   SLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQRQRQPI 67
           ++  FS PLFS LL+FF LILL FP   W  L SP  LL G L LSLLRLG TQR  + I
Sbjct: 7   TISCFSDPLFSTLLTFFALILLSFPRIFWPLLFSPVPLLTGLLLLSLLRLGATQRFPRHI 66

Query: 68  TTTN-------PQSIKFTQPTEHCSGSPIS-----------------SCFEESFVQWNVR 127
              N        ++     P E   G   +                 +CFEESFVQWNVR
Sbjct: 67  KDKNQIESEIGSRAAAVVPPEEEDRGRDDAVVSKLGGGGGICDIVSCACFEESFVQWNVR 126

Query: 128 APLEVIYEDYEEEEKKK--------------------KRYPSLSLYYPETDSDSSS---- 187
           APLEVIYE+YE E+ K                     +RYPSLSLYYPETDSDSSS    
Sbjct: 127 APLEVIYEEYEGEDDKDVSNESDPFTETEPRPVPVRIERYPSLSLYYPETDSDSSSDDEF 186

Query: 188 ---AADDEMENVCFMWDD-EDRDELIEIALD----KKRVSSEFFQLEEENLIEIDISPT 191
               A D ++++CFMWDD EDRDELIEIALD    K + SSE FQLEEENLIEIDISPT
Sbjct: 187 PIPGAWDSLDSLCFMWDDGEDRDELIEIALDKTTNKMKASSELFQLEEENLIEIDISPT 245

[Close]

BLAST of PI0014601 vs. NCBI nr
Match: XP_023518306.1 (uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-38
Identity = 119/238 (50.00%), Postives = 135/238 (56.72%), Query Frame = 0


Query: 2   SSSSYSSLPIFSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQ 61
           S++   S+ + S PLFS LLSFF L LL FP  LW  L SP  LL GFL LSLLRLG TQ
Sbjct: 35  SNTPTVSISLTSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQ 94

Query: 62  RQRQPITTTNPQSIKFTQPTE---------------------HCSGSPISSCFEESFVQW 121
           R     T  N   I++ +  E                      C+ S   +CFEESFVQW
Sbjct: 95  RSFLRQTNDNNYQIEYEESAEKDAAVQSESSTAVSESVSGGSKCADSVSCACFEESFVQW 154

Query: 122 NVRAPLEVIYEDYEEEEKKK-----------------KRYPSLSLYYPETDSDSSSAA-- 181
           NVRAPLEVIYE+YE E+  K                 +RYPSLSLYYPETDSDSSS    
Sbjct: 155 NVRAPLEVIYEEYEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNF 214

Query: 182 ------DDEMENVCFMWD-DEDRDELIEIALDKKRVSSEFFQLEEENL--IEIDISPT 191
                 D   +N+C MWD DEDRDELIEIALDK    +  F LEE+NL  IEIDISPT
Sbjct: 215 PTTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLEEDNLIEIEIDISPT 272

[Close]

BLAST of PI0014601 vs. TAIR 10
Match: AT4G21500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-23
Identity = 87/212 (41.04%), Postives = 120/212 (56.60%), Query Frame = 0


Query: 12  FSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQRQRQPITTTN 71
           FSHPLFS  ++ ++LIL+ FP  L    LSP +L++G L LSLLRLG+T   R+P    N
Sbjct: 11  FSHPLFSIFITLYSLILIYFPNDLLRIFLSPVLLISGALLLSLLRLGST---REP----N 70

Query: 72  PQSIKFTQPTEHCSGSPI-SSCFEESFVQWNVRAPLEVIYEDYEEEE-----------KK 131
            Q  K  + +E      +  S     FV+WN+RAPLEVI+E YE+EE           +K
Sbjct: 71  TQPDKSYEESEEPKVFLVRESDLMGGFVEWNLRAPLEVIHEAYEDEEEEEEEEDPTRFRK 130

Query: 132 KKRYPSLSLYYPETDSDSSSAADDEM-----------ENVCFMWDDEDR----DELIEIA 190
            +R+PSLSL YPE+DS+S SA+  E            EN+ F W++++     + LIEI 
Sbjct: 131 MERFPSLSLCYPESDSESDSASSSEFNFPEIGDWNSPENMGFRWEEDEGGIGCEGLIEIK 190

[Close]

BLAST of PI0014601 vs. TAIR 10
Match: AT4G05018.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 5.7e-08
Identity = 56/188 (29.79%), Postives = 91/188 (48.40%), Query Frame = 0


Query: 12  FSHPLFSALLSFFTLILLLFPPFLWTSLLSPAVLLAGFLFLSLLRLGTTQRQRQPITTTN 71
           FSHPLFS  +S +T+ LL FP      L+S   LL G   +S L LG+T++     +   
Sbjct: 13  FSHPLFSCFISLYTIFLLYFPQDSLRILISHVPLLIGAFLISCLHLGSTRK-----SIAR 72

Query: 72  PQSIKFTQPTEHCSGSPISSCFEESFVQWNVR--APLEVIYEDYEEEEKKK--------- 131
           P S + +   E  +G  ++      F++WN +  APLEVI+++ EE+             
Sbjct: 73  PGSNEDSIGPELKTGLGLN----PDFMEWNFKLGAPLEVIHKEEEEQSMTGVKDPTRFVM 132

Query: 132 -KRYPSLSLYYPETDSDSSSAADDEMENVCFMWDDEDRDELIEIALDKKRVSSEFFQLEE 188
            KR+PSLS++ PE+DS        E++    +  + D    + +    K  S   +  E 
Sbjct: 133 IKRFPSLSMFNPESDS--------ELDRDFPVMSENDPTRFVRLERSIKPESDMDYDSEL 183

The following BLAST results are available for this feature:

BLAST of PI0014601 vs.


Match Name	E-value	Identity	Description

BLAST of PI0014601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLD5	1.1e-80	76.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516950 PE=4 SV=1	[more]
A0A1S3B395	2.6e-77	74.89	VID27-like protein OS=Cucumis melo OX=3656 GN=LOC103485313 PE=4 SV=1	[more]
A0A6J1CME6	1.3e-39	50.63	uncharacterized protein LOC111012458 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1EEY1	1.9e-38	50.42	uncharacterized protein LOC111433544 OS=Cucurbita moschata OX=3662 GN=LOC1114335...	[more]
A0A6J1KY66	7.8e-37	49.59	uncharacterized protein LOC111497433 OS=Cucurbita maxima OX=3661 GN=LOC111497433...	[more]

BLAST of PI0014601 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658193.1	2.4e-80	76.09	uncharacterized protein LOC105435960 [Cucumis sativus] >KGN49187.1 hypothetical ...	[more]
XP_008441085.2	5.5e-77	74.89	PREDICTED: VID27-like protein, partial [Cucumis melo]	[more]
XP_038883304.1	6.1e-52	66.51	uncharacterized protein LOC120074292 [Benincasa hispida]	[more]
XP_022142309.1	2.7e-39	50.63	uncharacterized protein LOC111012458 [Momordica charantia] >XP_022142310.1 uncha...	[more]
XP_023518306.1	2.9e-38	50.00	uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0014601 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21500.1	2.8e-23	41.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G05018.1	5.7e-08	29.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37746	TRANSMEMBRANE PROTEIN	coord: 6..72 coord: 85..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014601.1	PI0014601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane