PI0014473 (gene) Melon (PI 482460) v1

Overview


Name	PI0014473
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	TF-B3 domain-containing protein
Location	chr06: 1924496 .. 1927730 (-)
RNA-Seq Expression	PI0014473
Synteny	PI0014473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAAACAACCCTAAAAAAATCAAAATTTTTCCCTCGTTCAAACACAAAATAAGGGACTGATTCACGTCCTTTCTCAAGAATGAATGATCTGAAGAAAATACGGCGACTGATTGTCTCACCATCTGCTTCCTTCGAGCCCACAGGTTGTTGAACACTGAACTAATGTATTTATTTATTTTTCCTTTGAATTCCGTTTCCCTTTGTTCATTCTCCATATTTTGTTTGGTTTCCCAGTAAAATTCTCGTTTAATTTTAACCTGAACTTTCTGTTGAATTTGTTCTGCTAACTTTCATCATTTGAAGGTTTTTTTCCCGACCTGTAATCGTCAATTCATACGTTGTCCCTTTTGTAGGCTTCTGCAAGTGATTTGTACTGAAAAAAGGTCTCCGGATGCAGTCAGGAAGGGAACCTTCGACAGAGCTTCCAACAATGGAGCCGCAAAATGGAGAAACTATGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTAAGTTCTTCCTCTCATTTAAATCACTCAGAAGTTTGAGAATAGTTAGAGCTACGTGGTAAGCTGGATTAGCTAGAAAGTAGGAAGTTGTTGATTAGTCTGGACTGTTTATGGCTGAAATTTTGAAGTGAATCTAACACTAGTCAAGCACAATGTTGTAACAAAAAAAAACTGACAAACAAAACAACTCGAGGGAGACGTAAAGATTGTTAACCTAGTTCAGTGCATGATCACCAACTATGGGAGTATTACACTCAGTGAAAAAAACTTTACTGTATAAAAAGTAAAATAATTACACCGAAATATTTCAAAGATTCCCCTACAACGATTCACGTACAACCTACTTTTCAGTTTCAACTTAGTCTCTCTCGAAAGTTTGAGAACTCCTTTACTTCCACAAATACACTTCTTCCAAACTTTGTTTGAGTTACCCTCAAAATAAACTTACTTGAAGTCCCTCCAAGTGTGAGCTCCTCCACCTTTATAAAATAATTTTTCTCAAACTAAGTATGAAATCCTCTCAATACAATTACAGTGGAAATTAGGCTTCCATAGCATGAGAGGTACCTTTTACACTTACAGTGATTGACAACAAATGACACTTCAGCCTAGTCTAAATGACTATCAGCAACACCCTCTACAGCGAGGTTCACTAAGTTCACAATCTGTACATTAAAGAGTTCGACATGAATTTTCTTTGAAAAACTTAAATCATGTTTCTATTGGACCGAAAGAAAATCGGTTACACTACATGGAACATGATGTTTGGCATAGTACAAGACATGTCGTAGAACATGTTACTCAAGTTATGCCAGTAACAAGATCAGTCAATCAGTCTGTCGTAATAATGACCAATCTAGAAAGTAGTTGACTAGTTTGAGGGATCATCCATGGTTTTGACATTTTTTTGTTATTATTATTTCTTAAAGAAACATTTGAAGAGAGTCTTGCAAGATTACCTTAGCCCGGAAACTATTAGAAAAAGAGTTCAAAAGAAATAATTGGAAACTATTATAAAAACAGTTCAGAAAAAAAATTTGGAAAAATGGGTTCAGAATTTCAGATAGCTACTCTAAAAGTTGGCCTTTTATTATTTGATTTTTTAAAAATATTTATTTTGAAGACTCTCATTCGGAATCACAAGCACAGTAAAATTAACCTTTAGAGATCGTTCAATCACAAATTTAACCAACAAAAACAAACTGTCTTCAAAACAGCCATCACTTTTCTGTTCAGAATCACAATGGTTACGACTTGACAGTACCCAATTCTTAGCTAATGCCAAATGCTCAAATTAGGCATTTTTTAAGCATGTAAATAAATCAGCTTAACTGTGAAGTGGTATCATATCTTTATTTTTAGGTTTTGCCGGCTAAATTTCATTCCATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGTGGTAAGGCACTCGACTCAAAACAGTGGAGGAAATTTGTTAATGATAATCGTCTCAAATCTGGAGATGCTTGTGTATTTGAGCTCATGGAGTGCAGCAGCACCATACTTAAATTTAGAGTTCAAATTCTCAGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAGCTTCCCTTTCTGTGGTTTCTTAGTTTTCAAAAGTCCCGACTTGTTGACATCATATGCGGTTTTAGAATCAGACAGCCTATTTGATATTTGTAAGTAATTTGTAATCCTGTTTTTTATTATCTCATGAATGTACAGGTGAAAAAGTTTTCATATTTTCATGTTTTTTTTTTTGAGAAAAGAACTTTTCATTCTGTATTTCATCTTCCTTGCATCTGAACTAGGGGGAACCTCCAATACATGTTTTAGGAAGCAGGGGAAACCATAGATCAATAATCAACTCATGCTTAGTCAATACTTGTTCCCTTCTTGAACTGTGTTGTTGCAACTTCATTGCTTAAGCACGACCGCTTAAAAGATTGGACATCAAGTCAAGCTAAAGTTCAATGATTATATTTCAGTAACGTATTTCTTGAGTTTTTTTGTTTTGTTTTATCAGCATGAATGTTCTTATTGCAAACATTACATATAATGTTTTGCTGGAGAATTTTGGGTTAAAGGGGGAGTGGTTCTTTCATTACCCTATCGGAATATTGTTGACTAAATTACTCTATACTTCTATGATCTTTGAATATCTGTGCTTCAAATATGCATATGCACACGAAGGACTTTTGAGACTCCATATTTCATCATCCCAAAGATGCATGAACTACAGATTATTAAATCCTCTCGAACTTGGTCGCCATATGTCTTACTTTCATCTTGAATATTTTGCTAGATGCAGTTGTTCAACCAAGATGGTTCTGGCGCTGCAATGAAGTCGTGCTTCCTCATGAGTCGTGCAATGCATTATGATATTTGTGTTCTTATGCCAAATGCAACAGGGTACATAGTTAATATGTAGATCCATTTTTTATTGTCATGACCCACACATCTTCATATTGTTATTAAATCTTGAATCTCAATCTATTTTCCTCTTTGTATTTCTTCAACCTTCTGCTCCGAAATCTTGACGGCATAAATCTAAATGTTTCCTTCTCCAAATTGTCCCAACGTCATCATCGTTTTACATTGATATAACCATTGTTTGACAATTGTT

mRNA sequence

TTTAAAACAACCCTAAAAAAATCAAAATTTTTCCCTCGTTCAAACACAAAATAAGGGACTGATTCACGTCCTTTCTCAAGAATGAATGATCTGAAGAAAATACGGCGACTGATTGTCTCACCATCTGCTTCCTTCGAGCCCACAGGCTTCTGCAAGTGATTTGTACTGAAAAAAGGTCTCCGGATGCAGTCAGGAAGGGAACCTTCGACAGAGCTTCCAACAATGGAGCCGCAAAATGGAGAAACTATGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTTTTGCCGGCTAAATTTCATTCCATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGTGGTAAGGCACTCGACTCAAAACAGTGGAGGAAATTTGTTAATGATAATCGTCTCAAATCTGGAGATGCTTGTGTATTTGAGCTCATGGAGTGCAGCAGCACCATACTTAAATTTAGAGTTCAAATTCTCAGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAGCTTCCCTTTCTGTGGTTTCTTAGTTTTCAAAAGTCCCGACTTGTTGACATCATATGCGGTTTTAGAATCAGACAGCCTATTTGATATTTATGCAGTTGTTCAACCAAGATGGTTCTGGCGCTGCAATGAAGTCGTGCTTCCTCATGAGTCGTGCAATGCATTATGATATTTGTGTTCTTATGCCAAATGCAACAGGGTACATAGTTAATATGTAGATCCATTTTTTATTGTCATGACCCACACATCTTCATATTGTTATTAAATCTTGAATCTCAATCTATTTTCCTCTTTGTATTTCTTCAACCTTCTGCTCCGAAATCTTGACGGCATAAATCTAAATGTTTCCTTCTCCAAATTGTCCCAACGTCATCATCGTTTTACATTGATATAACCATTGTTTGACAATTGTT

Coding sequence (CDS)

ATGCAGTCAGGAAGGGAACCTTCGACAGAGCTTCCAACAATGGAGCCGCAAAATGGAGAAACTATGCCACTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTTTTGCCGGCTAAATTTCATTCCATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGTGGTAAGGCACTCGACTCAAAACAGTGGAGGAAATTTGTTAATGATAATCGTCTCAAATCTGGAGATGCTTGTGTATTTGAGCTCATGGAGTGCAGCAGCACCATACTTAAATTTAGAGTTCAAATTCTCAGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAG

Protein sequence

MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRVQILSGDIPLELHDKFSGETKETPIHLD

Homology

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BLAST of PI0014473 vs. ExPASy Swiss-Prot
Match: Q7XLP4 (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 57/146 (39.04%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 5   REPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVL 64
           R P  E P    ++G  +PL GKPY   I+ KSHV P + +V+P  F  +LP+   PA L
Sbjct: 70  RPPEPE-PEKVARHG-VLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTPATL 129

Query: 65  LCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELM---ECSSTILKFRVQ 124
             RG+ W + + G R  + L++  WR F  DN L+ GD CVFEL+         ++FRVQ
Sbjct: 130 SWRGRSWGMRFTGGRLIQRLEA-GWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEFRVQ 189

Query: 125 ILSGDIPLELHDKFSGETKETPIHLD 148
           +L  +IP  +  +  G T  TPI +D
Sbjct: 190 VLRAEIPARIRGRAGGYTSATPIVID 212

[Close]

BLAST of PI0014473 vs. ExPASy Swiss-Prot
Match: Q9LHY9 (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-14
Identity = 57/146 (39.04%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 10  ELPTMEPQ---NGE----TMPL-SGKPYHAFILSKSHVAPIYNLVLPAKFHSIL--PAIV 69
           ELP   P    +GE    T PL +G P+   +++KSH+ P + + +P +F   L  P   
Sbjct: 28  ELPPPPPPASGSGEDWEATTPLAAGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEAR 87

Query: 70  IPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSST-ILKF 129
             AVL   GK W   Y G+ + K LD+  W +F  DNRL  GDACVFEL+   +   L+F
Sbjct: 88  TAAVLHSGGKSWATSYCGHLKMKKLDA-GWSEFAVDNRLLVGDACVFELVAMGAAGGLEF 147

Query: 130 RVQILSGDIPLELHDKFSGETKETPI 145
           +VQIL G +P E+     G T + PI
Sbjct: 148 QVQILRGGLPAEVVTS-KGLTSDQPI 171

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BLAST of PI0014473 vs. ExPASy Swiss-Prot
Match: Q2QMT5 (B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0591500 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.3e-05
Identity = 27/89 (30.34%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 26  GKPYHAFILSKSHVAPIYNLVLPAKF---HSILPAIVIPAVLLCRGKKWKIDYYG-NRRG 85
           G P    +L  +HV     L++P +F   H    +  I  +   R +KW + YY  +   
Sbjct: 223 GNPVFVVVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNRKQKWSVKYYYLSNTT 282

Query: 86  KALDSKQWRKFVNDNRLKSGDACVFELME 111
           +  +  +W KF+ +NRL+ G+ C+FELM+
Sbjct: 283 RGFNCHRWIKFIRENRLREGNVCIFELMK 311

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BLAST of PI0014473 vs. ExPASy Swiss-Prot
Match: Q6AV21 (B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0619800 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.7e-04
Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 47  LPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRR---GKA-LDSKQWRKFVNDNRLKSGD 106
           LP K H  L       VL C+G  W+I+    RR   GK    +  WRKF +DNRL+ GD
Sbjct: 455 LPDKNHQTL-------VLQCKGMIWQINLVVRRRYTKGKRWFLTAGWRKFAHDNRLRVGD 514

Query: 107 ACVFELMECSSTILKFRVQILS 125
            C+FEL +     L   V I+S
Sbjct: 515 FCLFELKKKKK--LTMEVHIIS 527

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BLAST of PI0014473 vs. ExPASy TrEMBL
Match: A0A0A0L3V3 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS R+P TELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
           PAVLLCRGKKWKIDY+GNRRGKALDSKQWRKFVNDN LKSGDA VFEL+ECSS+ILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QILSGDIPLELHDKFSGETKETPIHLD
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]

BLAST of PI0014473 vs. ExPASy TrEMBL
Match: A0A6J1IDC2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LOC111472772 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.4e-60
Identity = 112/147 (76.19%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS  +P TE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
           PAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSS++LKFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of PI0014473 vs. ExPASy TrEMBL
Match: A0A6J1FTK2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=LOC111447171 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.4e-59
Identity = 110/147 (74.83%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS  +P  E   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
           PAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSS+++KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of PI0014473 vs. ExPASy TrEMBL
Match: A0A6J1D033 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111016130 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.0e-57
Identity = 107/147 (72.79%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS  +P +E  TMEP+N E  PLS KP+H  IL+KSHVAPIYN+ LPAKFHS+LPAIVI
Sbjct: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
             VL C GK+W +DYYGNRRGK+LD++ WRKFVNDN LKSGDACVFELMECSS+ LKFRV
Sbjct: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIP++LHDKFSGE+K+TPI +D
Sbjct: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147

[Close]

BLAST of PI0014473 vs. ExPASy TrEMBL
Match: A0A6J1CYN6 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111015996 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50
Identity = 95/147 (64.63%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS  +P +E   MEP+  E  PLS KP+H  IL KSHVAP Y + LPAKFHS+LPAIVI
Sbjct: 1   MQSQEKPPSEPAEMEPRIDEIFPLSNKPFHGVILGKSHVAPAYLMSLPAKFHSVLPAIVI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
             V+ C GK+W++DYYGNRRG+ LD++ WRKFV++N LK GDACVFELMECSS+++KFRV
Sbjct: 61  HGVVYCGGKEWRVDYYGNRRGRTLDTRGWRKFVDENHLKYGDACVFELMECSSSMVKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIP++LHDKF GE+++TPI++D
Sbjct: 121 QILRGDIPVQLHDKFRGESRDTPINID 147

[Close]

BLAST of PI0014473 vs. NCBI nr
Match: XP_011650806.1 (B3 domain-containing protein Os04g0386900 [Cucumis sativus] >KGN56625.1 hypothetical protein Csa_010770 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 9.5e-74
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS R+P TELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
           PAVLLCRGKKWKIDY+GNRRGKALDSKQWRKFVNDN LKSGDA VFEL+ECSS+ILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QILSGDIPLELHDKFSGETKETPIHLD
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]

BLAST of PI0014473 vs. NCBI nr
Match: XP_038903804.1 (B3 domain-containing protein Os04g0386900-like [Benincasa hispida] >XP_038903811.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida])

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68
Identity = 128/147 (87.07%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS R+P TELPTMEPQ+GE +PLSGKPYHAFILSKSHVAPI +LVLPAKFHSILPAIVI
Sbjct: 1   MQSQRKPPTELPTMEPQDGEILPLSGKPYHAFILSKSHVAPICSLVLPAKFHSILPAIVI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
           PAVL C+GKKW IDYYGNRRGKALD+KQWRKFVNDNRLKSGDACVFELMECSS+ILKFRV
Sbjct: 61  PAVLFCQGKKWTIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIP +LHDKFSGETK+TPI+L+
Sbjct: 121 QILRGDIPFQLHDKFSGETKDTPIYLE 147

[Close]

BLAST of PI0014473 vs. NCBI nr
Match: XP_022974195.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974197.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975683.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975684.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975685.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 112/147 (76.19%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS  +P TE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
           PAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSS++LKFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of PI0014473 vs. NCBI nr
Match: XP_023539026.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG6597214.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028685.1 B3 domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.4 bits (607), Expect = 3.9e-59
Identity = 110/147 (74.83%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS  +P TE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ +PAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFMPAKFHSVLPAIMI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
           PAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSS+++KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of PI0014473 vs. NCBI nr
Match: XP_022941967.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_022941973.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata])

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58
Identity = 110/147 (74.83%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MQSGREPSTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60
           MQS  +P  E   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  PAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRV 120
           PAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSS+++KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILSGDIPLELHDKFSGETKETPIHLD 148
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of PI0014473 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04
Identity = 32/96 (33.33%), Postives = 44/96 (45.83%), Query Frame = 0


Query: 34  LSKSHVAPIYNLVLPAKFHSILPAIVIPAVLL-CRGKKW--KIDYYGNRRGKALDSKQWR 93
           + +SHV     L +P K+      I    V++     KW  K + +G  RG    S  W+
Sbjct: 227 MKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQVDQTKWEMKFNIFG-ARGSGGISTGWK 286

Query: 94  KFVNDNRLKSGDACVFELMECSSTILKFRVQILSGD 127
           KFV DN L+ GD CVFE     +  L   V I  G+
Sbjct: 287 KFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

[Close]

BLAST of PI0014473 vs. TAIR 10
Match: AT5G58280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 41.2 bits (95), Expect = 8.4e-04
Identity = 32/104 (30.77%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 25  SGKPYHAFILSKSHVAPIYNLVLPAKF-HSILPAIVIPAVLLC-RGKKWKIDYYGNRRGK 84
           S  PY    + +SHV   + L LP++F     P   +   L    G+ ++  Y G R G 
Sbjct: 122 SPHPYFVKSMVRSHVYSCFWLGLPSRFCADNFPEETMEIELEDEEGEVYEAVYIGRRAGL 181

Query: 85  ALDSKQWRKFVNDNRLKSGDACVFELMECSSTILKFRVQILSGD 127
              S  W++F  D++L  GDA +FEL+E      KF++ +  G+
Sbjct: 182 ---SGGWKRFALDHKLDDGDALLFELVEPK----KFKIYVFKGN 218

The following BLAST results are available for this feature:

BLAST of PI0014473 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XLP4	1.1e-19	39.04	B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9LHY9	3.9e-14	39.04	B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q2QMT5	3.3e-05	30.34	B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q6AV21	3.7e-04	40.24	B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of PI0014473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3V3	4.6e-74	94.56	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 ...	[more]
A0A6J1IDC2	6.4e-60	76.19	B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FTK2	5.4e-59	74.83	B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1D033	3.0e-57	72.79	B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CYN6	1.2e-50	64.63	B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN...	[more]

BLAST of PI0014473 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650806.1	9.5e-74	94.56	B3 domain-containing protein Os04g0386900 [Cucumis sativus] >KGN56625.1 hypothet...	[more]
XP_038903804.1	2.0e-68	87.07	B3 domain-containing protein Os04g0386900-like [Benincasa hispida] >XP_038903811...	[more]
XP_022974195.1	1.3e-59	76.19	B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196....	[more]
XP_023539026.1	3.9e-59	74.83	B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG...	[more]
XP_022941967.1	1.1e-58	74.83	B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_02294197...	[more]

BLAST of PI0014473 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33280.1	1.7e-04	33.33	AP2/B3-like transcriptional factor family protein	[more]
AT5G58280.1	8.4e-04	30.77	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 34..126 e-value: 1.1E-5 score: 34.8
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 34..114 e-value: 6.9E-12 score: 45.1
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 30..126 score: 11.687973
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 33..124 e-value: 7.33799E-16 score: 66.5825
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 17..125 e-value: 4.1E-18 score: 67.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 26..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31391:SF64	B3 DOMAIN-CONTAINING PROTEIN OS04G0386900	coord: 6..140
IPR044837	B3 domain-containing protein REM16-like	PANTHER	PTHR31391	B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED	coord: 6..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014473.1	PI0014473.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding