PI0014401 (gene) Melon (PI 482460) v1

Overview
NamePI0014401
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Locationchr06: 9275061 .. 9275903 (+)
RNA-Seq ExpressionPI0014401
SyntenyPI0014401
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGTTCCTTTCGAGCCCCCAAACACATCTGGACGAAGGAGGAAGAGTCGTACCTGGTCAAGGTCTTGGTGGAGTTGGTATCCGTCCGCGGCTGGAAGTCAGACAATAGTACCTTCTGTCCTAGGTACCTGGCTCAGCTACAGAGAATGCTGGCGGAGAAGATGCCTGGATGTAATATCCAAGGTTCGTCGACAATTCGGATAAAAAACATGAAGAAAACATTCCATGTCATTGCAGAAATGCACAGGTCATCGTGTAGTGGGTTCGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAAAGAGTTGTTCGACAATTGGGTTAAGGTAAGTTATTCATTATGAAAATACGATGTTCGTTTATAATAAAAAAACTGACAATTTATTTAAAAACTTGAACAGAGTTATCCTGCTGTGAAGGGCCTCCTAAACAAGCCATTTTCCCATTATGACGACCTGTGCTATGTATTTGGGAAGGATTGTGCGACGAGAGCTCGCGCAGAGACATTCGCCAATGTTGGGTCGAATGTGCCTGGAGGGTTCGAGGGATTTTTCGCTGATTATGGAAACGATACGGAGATCCCTACGATGTACAATCAGGGACTAGACATGTCGCCCGATGACATGGCGGGCTCACGTCCCGGTCGCTCGATGGAGGGTAGGACTGGTTCAAGCGGATGGAAGTGGAAGCGAGGAGGCCAGGCAGCACAGACTGTGGAGATCATTCAAAATGTGATGGACTTCACCAACGACCAGTTGAAGGCCATTGCAAAGTGGCCGAATTTACAACGTCAAGATGAAGTCACCGCTCGTGACGAAGTTGTTAACCAGCGGTAG

mRNA sequence

ATGGCAAGTTCCTTTCGAGCCCCCAAACACATCTGGACGAAGGAGGAAGAGTCGTACCTGGTCAAGGTCTTGGTGGAGTTGGTATCCGTCCGCGGCTGGAAGTCAGACAATAGTACCTTCTGTCCTAGGTACCTGGCTCAGCTACAGAGAATGCTGGCGGAGAAGATGCCTGGATGTAATATCCAAGGTTCGTCGACAATTCGGATAAAAAACATGAAGAAAACATTCCATGTCATTGCAGAAATGCACAGGTCATCGTGTAGTGGGTTCGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAAAGAGTTGTTCGACAATTGGGTTAAGAGTTATCCTGCTGTGAAGGGCCTCCTAAACAAGCCATTTTCCCATTATGACGACCTGTGCTATGTATTTGGGAAGGATTGTGCGACGAGAGCTCGCGCAGAGACATTCGCCAATGTTGGGTCGAATGTGCCTGGAGGGTTCGAGGGATTTTTCGCTGATTATGGAAACGATACGGAGATCCCTACGATGTACAATCAGGGACTAGACATGTCGCCCGATGACATGGCGGGCTCACGTCCCGGTCGCTCGATGGAGGGTAGGACTGGTTCAAGCGGATGGAAGTGGAAGCGAGGAGGCCAGGCAGCACAGACTGTGGAGATCATTCAAAATGTGATGGACTTCACCAACGACCAGTTGAAGGCCATTGCAAAGTGGCCGAATTTACAACGTCAAGATGAAGTCACCGCTCGTGACGAAGTTGTTAACCAGCGGTAG

Coding sequence (CDS)

ATGGCAAGTTCCTTTCGAGCCCCCAAACACATCTGGACGAAGGAGGAAGAGTCGTACCTGGTCAAGGTCTTGGTGGAGTTGGTATCCGTCCGCGGCTGGAAGTCAGACAATAGTACCTTCTGTCCTAGGTACCTGGCTCAGCTACAGAGAATGCTGGCGGAGAAGATGCCTGGATGTAATATCCAAGGTTCGTCGACAATTCGGATAAAAAACATGAAGAAAACATTCCATGTCATTGCAGAAATGCACAGGTCATCGTGTAGTGGGTTCGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAAAGAGTTGTTCGACAATTGGGTTAAGAGTTATCCTGCTGTGAAGGGCCTCCTAAACAAGCCATTTTCCCATTATGACGACCTGTGCTATGTATTTGGGAAGGATTGTGCGACGAGAGCTCGCGCAGAGACATTCGCCAATGTTGGGTCGAATGTGCCTGGAGGGTTCGAGGGATTTTTCGCTGATTATGGAAACGATACGGAGATCCCTACGATGTACAATCAGGGACTAGACATGTCGCCCGATGACATGGCGGGCTCACGTCCCGGTCGCTCGATGGAGGGTAGGACTGGTTCAAGCGGATGGAAGTGGAAGCGAGGAGGCCAGGCAGCACAGACTGTGGAGATCATTCAAAATGTGATGGACTTCACCAACGACCAGTTGAAGGCCATTGCAAAGTGGCCGAATTTACAACGTCAAGATGAAGTCACCGCTCGTGACGAAGTTGTTAACCAGCGGTAG

Protein sequence

MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTIRIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQR
Homology
BLAST of PI0014401 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.0e-80
Identity = 157/257 (61.09%), Postives = 191/257 (74.32%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           MAS  RAPKH WTKEEE   V+ LVELVS  GW+SDN TF P YLAQLQRM+AEK+PG N
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKG 120
           IQ SSTI   +K++KKT+H IAEM   SCSGFGWN+E +CIIAE++LFD+W+KS+PA KG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQ 180
           LL+K F +YDDL YVFGKD AT AR+ETF NVGSNV   F         +D +IPTMY+Q
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 GLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP 240
           G+ MSPD+M G R G++ E R  SS  K KRG +  +TVE+I++VM+F N+QLKAIA WP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 NLQRQDEVTARDEVVNQ 255
             +R  EV  R +VV Q
Sbjct: 241 KEKRAMEVEMRAQVVKQ 257

BLAST of PI0014401 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.0e-80
Identity = 157/257 (61.09%), Postives = 191/257 (74.32%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           MAS  RAPKH WTKEEE   V+ LVELVS  GW+SDN TF P YLAQLQRM+AEK+PG N
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKG 120
           IQ SSTI   +K++KKT+H IAEM   SCSGFGWN+E +CIIAE++LFD+W+KS+PA KG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQ 180
           LL+K F +YDDL YVFGKD AT AR+ETF NVGSNV   F         +D +IPTMY+Q
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 GLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP 240
           G+ MSPD+M G R G++ E R  SS  K KRG +  +TVE+I++VM+F N+QLKAIA WP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 NLQRQDEVTARDEVVNQ 255
             +R  EV  R +VV Q
Sbjct: 241 KEKRAMEVEMRAQVVKQ 257

BLAST of PI0014401 vs. ExPASy TrEMBL
Match: A0A5D3C1M0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00570 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.1e-78
Identity = 149/255 (58.43%), Postives = 183/255 (71.76%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           MASS R PKH WTKEEE+ LV+ LVELV+  GW+SDN TF P YL QL RM+A K+PGCN
Sbjct: 1   MASSSRLPKHTWTKEEEASLVECLVELVNAGGWRSDNGTFRPGYLNQLVRMMAFKIPGCN 60

Query: 61  IQGSS-TIRIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGL 120
           I  S+   RIK MK+ FH +AEM   +CSGFGWNDE KCI+ EKELFD+WVKS+PA KGL
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVVEKELFDDWVKSHPAAKGL 120

Query: 121 LNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFFADYGNDTEIPTMYNQGL 180
           LNK F HYD+L YVFGKD AT  RAE+FA++GSN P G++   AD   DT+ P MY+ GL
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGL 180

Query: 181 DMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNL 240
           +MSPDD+  +R  R  E R  SSG K KR G A  + +I++  +++ N+QL  IA+WP L
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPIL 240

Query: 241 QRQDEVTARDEVVNQ 255
           QRQD    R E+V Q
Sbjct: 241 QRQDASQTRQEIVRQ 255

BLAST of PI0014401 vs. ExPASy TrEMBL
Match: A0A5D3DBP2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00100 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.2e-77
Identity = 149/250 (59.60%), Postives = 189/250 (75.60%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           M++S RAP+H+WTKEEE  LV+ L+ELVS+ GWKSDN TF P YLAQL R++AEK+PGC 
Sbjct: 1   MSTSNRAPRHVWTKEEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRIMAEKLPGCQ 60

Query: 61  IQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKG 120
           ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KCI+AEKELFDNWV+S+PA KG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQ 180
           LLNKPFS+YD+L YVFG+D AT   AETFA+VGSN P GG++ F    GN+  +P +Y+Q
Sbjct: 121 LLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFLP-VYSQ 180

Query: 181 GLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP 240
           G+D+S DD+  SRP R+ EGRTGSSG K KRG Q    +E I   +D TN+QL+ IA+WP
Sbjct: 181 GIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWP 240

Query: 241 --NLQRQDEV 246
             NL   + V
Sbjct: 241 ARNLANDNHV 249

BLAST of PI0014401 vs. ExPASy TrEMBL
Match: A0A5A7VHM3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00480 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.2e-77
Identity = 146/240 (60.83%), Postives = 185/240 (77.08%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           M++S RAP+H+WT+EEE  +V+ L+ELVS+ GWKSDN TF P YLAQL RM+AEK+PGC 
Sbjct: 1   MSTSNRAPRHVWTREEEGTIVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  IQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKG 120
           ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KCI+AEKELFDNWV+S+PA K 
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKE 120

Query: 121 LLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQ 180
           LLNKPFS+YD+L YVFG+D AT   AETFA+VGSN P GG++ F    GN+ + P +Y+Q
Sbjct: 121 LLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE-DFPPVYSQ 180

Query: 181 GLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP 238
           G+D+S DD+  SRP R+ EGRTGSSG K KRG Q    VE I  V+D TN+QL+ IA+WP
Sbjct: 181 GVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIYLVLDQTNEQLRQIAEWP 239

BLAST of PI0014401 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 4.0e-80
Identity = 157/257 (61.09%), Postives = 191/257 (74.32%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           MAS  RAPKH WTKEEE   V+ LVELVS  GW+SDN TF P YLAQLQRM+AEK+PG N
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKG 120
           IQ SSTI   +K++KKT+H IAEM   SCSGFGWN+E +CIIAE++LFD+W+KS+PA KG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQ 180
           LL+K F +YDDL YVFGKD AT AR+ETF NVGSNV   F         +D +IPTMY+Q
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 GLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP 240
           G+ MSPD+M G R G++ E R  SS  K KRG +  +TVE+I++VM+F N+QLKAIA WP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 NLQRQDEVTARDEVVNQ 255
             +R  EV  R +VV Q
Sbjct: 241 KEKRAMEVEMRAQVVKQ 257

BLAST of PI0014401 vs. NCBI nr
Match: TYK05082.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 301.6 bits (771), Expect = 6.4e-78
Identity = 149/255 (58.43%), Postives = 183/255 (71.76%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           MASS R PKH WTKEEE+ LV+ LVELV+  GW+SDN TF P YL QL RM+A K+PGCN
Sbjct: 1   MASSSRLPKHTWTKEEEASLVECLVELVNAGGWRSDNGTFRPGYLNQLVRMMAFKIPGCN 60

Query: 61  IQGSS-TIRIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGL 120
           I  S+   RIK MK+ FH +AEM   +CSGFGWNDE KCI+ EKELFD+WVKS+PA KGL
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVVEKELFDDWVKSHPAAKGL 120

Query: 121 LNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFFADYGNDTEIPTMYNQGL 180
           LNK F HYD+L YVFGKD AT  RAE+FA++GSN P G++   AD   DT+ P MY+ GL
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGL 180

Query: 181 DMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNL 240
           +MSPDD+  +R  R  E R  SSG K KR G A  + +I++  +++ N+QL  IA+WP L
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPIL 240

Query: 241 QRQDEVTARDEVVNQ 255
           QRQD    R E+V Q
Sbjct: 241 QRQDASQTRQEIVRQ 255

BLAST of PI0014401 vs. NCBI nr
Match: KAA0067583.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 2.4e-77
Identity = 146/240 (60.83%), Postives = 185/240 (77.08%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           M++S RAP+H+WT+EEE  +V+ L+ELVS+ GWKSDN TF P YLAQL RM+AEK+PGC 
Sbjct: 1   MSTSNRAPRHVWTREEEGTIVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  IQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKG 120
           ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KCI+AEKELFDNWV+S+PA K 
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKE 120

Query: 121 LLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQ 180
           LLNKPFS+YD+L YVFG+D AT   AETFA+VGSN P GG++ F    GN+ + P +Y+Q
Sbjct: 121 LLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE-DFPPVYSQ 180

Query: 181 GLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP 238
           G+D+S DD+  SRP R+ EGRTGSSG K KRG Q    VE I  V+D TN+QL+ IA+WP
Sbjct: 181 GVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIYLVLDQTNEQLRQIAEWP 239

BLAST of PI0014401 vs. NCBI nr
Match: TYK20986.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 2.4e-77
Identity = 149/250 (59.60%), Postives = 189/250 (75.60%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           M++S RAP+H+WTKEEE  LV+ L+ELVS+ GWKSDN TF P YLAQL R++AEK+PGC 
Sbjct: 1   MSTSNRAPRHVWTKEEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRIMAEKLPGCQ 60

Query: 61  IQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKG 120
           ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KCI+AEKELFDNWV+S+PA KG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQ 180
           LLNKPFS+YD+L YVFG+D AT   AETFA+VGSN P GG++ F    GN+  +P +Y+Q
Sbjct: 121 LLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFLP-VYSQ 180

Query: 181 GLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP 240
           G+D+S DD+  SRP R+ EGRTGSSG K KRG Q    +E I   +D TN+QL+ IA+WP
Sbjct: 181 GIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWP 240

Query: 241 --NLQRQDEV 246
             NL   + V
Sbjct: 241 ARNLANDNHV 249

BLAST of PI0014401 vs. NCBI nr
Match: KAA0062964.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.3 bits (765), Expect = 3.2e-77
Identity = 149/250 (59.60%), Postives = 189/250 (75.60%), Query Frame = 0

Query: 1   MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCN 60
           M++S RAP+H+WT+EEE  LV+ L+ELVS+ GWKSDN TF P YLAQL RM+AEK+PGC 
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  IQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKG 120
           ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KCI+AEKELFDNWV+S+PAVKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAVKG 120

Query: 121 LLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQ 180
           LLNKPF +YD+L YVFG D AT   AETFA+VGSN P GG++ F    GN+ + P++Y+Q
Sbjct: 121 LLNKPFPYYDELTYVFGCDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE-DFPSVYSQ 180

Query: 181 GLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP 240
           G+D+S DD+  SRP R+ EGRTGSSG K KRG Q    +E I   +D TN+QL+ IA+WP
Sbjct: 181 GVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWP 240

Query: 241 --NLQRQDEV 246
             NL   + V
Sbjct: 241 ARNLANDNHV 249

BLAST of PI0014401 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 7.0e-06
Identity = 18/68 (26.47%), Postives = 41/68 (60.29%), Query Frame = 0

Query: 68  RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGLLNKPFSHY 127
           R K++++ F+ I  + RS   GF W++E + + A+  ++ +++K++   +  + +P  +Y
Sbjct: 240 RYKSLRRQFNAIKSILRS--DGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYY 299

Query: 128 DDLCYVFG 136
            DLC + G
Sbjct: 300 KDLCVLCG 305

BLAST of PI0014401 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 48.9 bits (115), Expect = 7.0e-06
Identity = 18/68 (26.47%), Postives = 41/68 (60.29%), Query Frame = 0

Query: 68  RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGLLNKPFSHY 127
           R K++++ F+ I  + RS   GF W++E + + A+  ++ +++K++   +  + +P  +Y
Sbjct: 240 RYKSLRRQFNAIKSILRS--DGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYY 299

Query: 128 DDLCYVFG 136
            DLC + G
Sbjct: 300 KDLCVLCG 305

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U0H72.0e-8061.09Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4L32.0e-8061.09uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
A0A5D3C1M03.1e-7858.43Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DBP21.2e-7759.60Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VHM31.2e-7760.83Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
XP_008441954.14.0e-8061.09PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret... [more]
TYK05082.16.4e-7858.43retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0067583.12.4e-7760.83retrotransposon protein [Cucumis melo var. makuwa][more]
TYK20986.12.4e-7759.60retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0062964.13.2e-7759.60retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT4G02210.17.0e-0626.47unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.27.0e-0626.47unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 12..108
e-value: 8.4E-8
score: 33.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..206
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 8..167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0014401.1PI0014401.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane