Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACGCCCAATCATCTGGTTCATCTTCCTCCACCATGAATGTTCCAAGCTTCAACACACCTTCCCTAAATCAACTTTTAAACCAGGTAACAACAATCAAGCTTGAGAGAGGAAATTATCTGTTGTGGAGGATCGTTGCCCTTCCAATCCTGAGGAGCCATAAACTTGAAGGTTACATACTGGGAGAAATTACTTGTTCTCCGAAATTTATAGGACAGAGTACAAATGAGACCAACACCATAGTAGGAGCCACTACTACTGAAGGTACTAGTTCTCAGACCACCACAGTCAGAAGCATTGTAAGCCAAACAACAAGTAGTACTGTTAATCCAACTTATGAGTCATGGTTTGTAATTGATCAATTTCTTCTGGGATAGCTTTACAATTCAATGACACTAGAAGTTGCTACACAGTTGATGGGCTATGAACACTCGCTTGAACTATGGACAACAATACAAAGGTTGTTCGGAGTCCAATCCAGAGCTGAGGAAGATTATCTCCGTCAAACGTTTCAACAAACACGAAAAAGTAACACTACTATGTCTGAATATTTGAGATTGATGAAAATGCACTCTGATAATTTAGGGATGGTCGGAAGTCTTGTTCCAGAGAGAGCCCTAGTCTGTCATGTTTTATTGGGACTTGATGAAGACTATAACCCAGTGGTAGCTATCCTTCAAGCAAGACCCACCATCTCCTAG
mRNA sequence
ATGGACAACGCCCAATCATCTGGTTCATCTTCCTCCACCATGAATGTTCCAAGCTTCAACACACCTTCCCTAAATCAACTTTTAAACCAGGTAACAACAATCAAGCTTGAGAGAGGAAATTATCTGTTGTGGAGGATCGTTGCCCTTCCAATCCTGAGGAGCCATAAACTTGAAGGTTACATACTGGGAGAAATTACTTGTTCTCCGAAATTTATAGGACAGAGTACAAATGAGACCAACACCATAGTAGGAGCCACTACTACTGAAGGTACTAGTTCTCAGACCACCACAGTCAGAAGCATTCTTTACAATTCAATGACACTAGAAGTTGCTACACAGTTGATGGGCTATGAACACTCGCTTGAACTATGGACAACAATACAAAGGTTGTTCGGAGTCCAATCCAGAGCTGAGGAAGATTATCTCCGTCAAACGTTTCAACAAACACGAAAAAGTAACACTACTATGTCTGAATATTTGAGATTGATGAAAATGCACTCTGATAATTTAGGGATGGTCGGAAGTCTTGTTCCAGAGAGAGCCCTAGTCTGTCATGTTTTATTGGGACTTGATGAAGACTATAACCCAGTGGTAGCTATCCTTCAAGCAAGACCCACCATCTCCTAG
Coding sequence (CDS)
ATGGACAACGCCCAATCATCTGGTTCATCTTCCTCCACCATGAATGTTCCAAGCTTCAACACACCTTCCCTAAATCAACTTTTAAACCAGGTAACAACAATCAAGCTTGAGAGAGGAAATTATCTGTTGTGGAGGATCGTTGCCCTTCCAATCCTGAGGAGCCATAAACTTGAAGGTTACATACTGGGAGAAATTACTTGTTCTCCGAAATTTATAGGACAGAGTACAAATGAGACCAACACCATAGTAGGAGCCACTACTACTGAAGGTACTAGTTCTCAGACCACCACAGTCAGAAGCATTCTTTACAATTCAATGACACTAGAAGTTGCTACACAGTTGATGGGCTATGAACACTCGCTTGAACTATGGACAACAATACAAAGGTTGTTCGGAGTCCAATCCAGAGCTGAGGAAGATTATCTCCGTCAAACGTTTCAACAAACACGAAAAAGTAACACTACTATGTCTGAATATTTGAGATTGATGAAAATGCACTCTGATAATTTAGGGATGGTCGGAAGTCTTGTTCCAGAGAGAGCCCTAGTCTGTCATGTTTTATTGGGACTTGATGAAGACTATAACCCAGTGGTAGCTATCCTTCAAGCAAGACCCACCATCTCCTAG
Protein sequence
MDNAQSSGSSSSTMNVPSFNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGYILGEITCSPKFIGQSTNETNTIVGATTTEGTSSQTTTVRSILYNSMTLEVATQLMGYEHSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRLMKMHSDNLGMVGSLVPERALVCHVLLGLDEDYNPVVAILQARPTIS
Homology
BLAST of PI0014284 vs. ExPASy TrEMBL
Match:
A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 114/226 (50.44%), Postives = 144/226 (63.72%), Query Frame = 0
Query: 1 MDNAQSSGSSSSTMNVPSFNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGY 60
M NAQ + + S ++ F+ P LNQ+LNQ+ T+KL+R NYLLW+ +ALPIL+ +KLEG+
Sbjct: 1 MANAQPTAAPPS-LSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGH 60
Query: 61 ILGEITCSPKFI--GQSTNETNTIVGATTTEGTSSQTT--TVRSI--------------L 120
+ GE C F+ S+N T T GA T G SS T V S+ L
Sbjct: 61 LTGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGWL 120
Query: 121 YNSMTLEVATQLMGYEHSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRL 180
YNSMT +VA QLMG+ + +LW Q FGVQSRAEED+LRQ Q TRK NT M EYL +
Sbjct: 121 YNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLV 180
Query: 181 MKMHSDNLGMVGSLVPERALVCHVLLGLDEDYNPVVAILQARPTIS 209
MK + DNLG VGS VP RAL+ VLLGLDE YN V+ ++Q +P IS
Sbjct: 181 MKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDIS 225
BLAST of PI0014284 vs. ExPASy TrEMBL
Match:
A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.7e-42
Identity = 100/200 (50.00%), Postives = 134/200 (67.00%), Query Frame = 0
Query: 19 FNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGYILGEITCSPKFIGQSTNE 78
F +P LNQLLNQ+T+IK++RGN+LLW+ +ALPILRS+KL Y+ G+ C P + +
Sbjct: 22 FTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPTHLVPTDTP 81
Query: 79 TNTIVGATTTEGTSSQTTTVRS----------ILYNSMTLEVATQLMGYEHSLELWTTIQ 138
TN I G+T+++ + + T + LYNSM +VA Q+MG+ S ELWT +Q
Sbjct: 82 TN-IEGSTSSQSSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQ 141
Query: 139 RLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRLMKMHSDNLGMVGSLVPERALVCHVLL 198
LFGVQSRAE DYL+Q FQQT K + M EYL+LMK H+DNL + GS V R LV VL
Sbjct: 142 ELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLT 201
Query: 199 GLDEDYNPVVAILQARPTIS 209
GLDE+YNP+V +Q + +S
Sbjct: 202 GLDEEYNPIVVAVQGKVNLS 220
BLAST of PI0014284 vs. ExPASy TrEMBL
Match:
A0A5D3BCH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00140 PE=4 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35
Identity = 100/201 (49.75%), Postives = 126/201 (62.69%), Query Frame = 0
Query: 1 MDNAQSSGSSSSTMNVPSFNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGY 60
M NAQ + + S ++ F+ P LNQ+LNQ+ T+KL+R NYLLW+ +ALPIL+ +KLEG+
Sbjct: 1 MANAQPTAAPPS-LSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGH 60
Query: 61 ILGEITCSPKFI--GQSTNETNTIVGATTTEGTSSQTT--TVRSI--------------L 120
+ GE C F+ S+N T T GA T G SS T V S+ L
Sbjct: 61 LTGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGWL 120
Query: 121 YNSMTLEVATQLMGYEHSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRL 180
YNSMT +VA QLMG+ + +LW Q FGVQSRAEED+LRQ Q TRK NT M EYL +
Sbjct: 121 YNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLV 180
Query: 181 MKMHSDNLGMVGSLVPERALV 184
MK + DNLG VGS VP RAL+
Sbjct: 181 MKTNVDNLGQVGSPVPRRALI 200
BLAST of PI0014284 vs. ExPASy TrEMBL
Match:
A0A5A7VPY0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G001000 PE=4 SV=1)
HSP 1 Score: 158.3 bits (399), Expect = 3.5e-35
Identity = 91/185 (49.19%), Postives = 118/185 (63.78%), Query Frame = 0
Query: 18 SFNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGYILGEITCSPKFIGQSTN 77
SF P LNQ+LNQ+TTIKL+RGNYLLW+ +ALPIL+S+KL ++ GE C PK I +T
Sbjct: 16 SFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILKSYKLNSHLFGESPCLPKIIMLTTQ 75
Query: 78 ETNTIV--GATTTEGTSSQTTTVRSI-----------------LYNSMTLEVATQLMGYE 137
+IV ++ TSS +T V ++ LYNSMT EV QLMG+
Sbjct: 76 PNESIVENAGEPSQETSSSSTAVVTVNPKYERWITTDLLLLGWLYNSMTPEVTIQLMGFT 135
Query: 138 HSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRLMKMHSDNLGMVGSLVP 184
++ +LW Q LFG+QSRA+ED+L QTFQ T+K N M EYLR MK + +NLG SLVP
Sbjct: 136 NAKDLWEATQDLFGIQSRAKEDFLHQTFQTTKKGNLNMEEYLRTMKNNVNNLGQADSLVP 195
BLAST of PI0014284 vs. ExPASy TrEMBL
Match:
A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31
Identity = 71/107 (66.36%), Postives = 87/107 (81.31%), Query Frame = 0
Query: 102 LYNSMTLEVATQLMGYEHSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLR 161
LYNSMT EVATQ+MGYE++ +LW IQ LFGVQS+AEEDYLRQ FQQTRK + M+++LR
Sbjct: 49 LYNSMTPEVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLR 108
Query: 162 LMKMHSDNLGMVGSLVPERALVCHVLLGLDEDYNPVVAILQARPTIS 209
+MK H+DNLG GS VP R+L+ VLLGLDE+YNPVVA +Q + IS
Sbjct: 109 VMKSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGIS 155
BLAST of PI0014284 vs. NCBI nr
Match:
KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])
HSP 1 Score: 188.3 bits (477), Expect = 6.5e-44
Identity = 114/226 (50.44%), Postives = 144/226 (63.72%), Query Frame = 0
Query: 1 MDNAQSSGSSSSTMNVPSFNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGY 60
M NAQ + + S ++ F+ P LNQ+LNQ+ T+KL+R NYLLW+ +ALPIL+ +KLEG+
Sbjct: 1 MANAQPTAAPPS-LSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGH 60
Query: 61 ILGEITCSPKFI--GQSTNETNTIVGATTTEGTSSQTT--TVRSI--------------L 120
+ GE C F+ S+N T T GA T G SS T V S+ L
Sbjct: 61 LTGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGWL 120
Query: 121 YNSMTLEVATQLMGYEHSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRL 180
YNSMT +VA QLMG+ + +LW Q FGVQSRAEED+LRQ Q TRK NT M EYL +
Sbjct: 121 YNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLV 180
Query: 181 MKMHSDNLGMVGSLVPERALVCHVLLGLDEDYNPVVAILQARPTIS 209
MK + DNLG VGS VP RAL+ VLLGLDE YN V+ ++Q +P IS
Sbjct: 181 MKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDIS 225
BLAST of PI0014284 vs. NCBI nr
Match:
XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])
HSP 1 Score: 182.6 bits (462), Expect = 3.6e-42
Identity = 100/200 (50.00%), Postives = 134/200 (67.00%), Query Frame = 0
Query: 19 FNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGYILGEITCSPKFIGQSTNE 78
F +P LNQLLNQ+T+IK++RGN+LLW+ +ALPILRS+KL Y+ G+ C P + +
Sbjct: 22 FTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPTHLVPTDTP 81
Query: 79 TNTIVGATTTEGTSSQTTTVRS----------ILYNSMTLEVATQLMGYEHSLELWTTIQ 138
TN I G+T+++ + + T + LYNSM +VA Q+MG+ S ELWT +Q
Sbjct: 82 TN-IEGSTSSQSSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQ 141
Query: 139 RLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRLMKMHSDNLGMVGSLVPERALVCHVLL 198
LFGVQSRAE DYL+Q FQQT K + M EYL+LMK H+DNL + GS V R LV VL
Sbjct: 142 ELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLT 201
Query: 199 GLDEDYNPVVAILQARPTIS 209
GLDE+YNP+V +Q + +S
Sbjct: 202 GLDEEYNPIVVAVQGKVNLS 220
BLAST of PI0014284 vs. NCBI nr
Match:
XP_038902487.1 (uncharacterized protein LOC120089143 [Benincasa hispida])
HSP 1 Score: 171.0 bits (432), Expect = 1.1e-38
Identity = 105/211 (49.76%), Postives = 127/211 (60.19%), Query Frame = 0
Query: 32 TTIKLERGNYLLWRIVALPILRSHKLEGYILGEITCSPKFIGQSTNETNT---------- 91
TTIKL++ NYLLWR +ALPILRS++LEG++ GE C P+F + T T
Sbjct: 43 TTIKLDQENYLLWRNLALPILRSYRLEGHLTGEDPCPPRFSVATDQSTATVPPGDEAGLG 102
Query: 92 -----IVGATTTEG--TSSQTTTVRSI-----------------LYNSMTLEVATQLMGY 151
I T +G T+S ++ V + LYN MT EVA Q+MGY
Sbjct: 103 GQYSGIASLTPQQGITTASNSSPVLQVNPFYESRTVVDQLLLGWLYNFMTAEVAMQVMGY 162
Query: 152 EHSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRLMKMHSDNLGMVGSLV 209
E+ LW IQ LFG+QSRA EDYLRQ FQQT K M EYLR+MK HSDNLG+ GS V
Sbjct: 163 ENYKYLWAAIQELFGLQSRAGEDYLRQVFQQTCKGAMKMPEYLRVMKTHSDNLGLTGSPV 222
BLAST of PI0014284 vs. NCBI nr
Match:
TYJ96311.1 (uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 159.8 bits (403), Expect = 2.5e-35
Identity = 100/201 (49.75%), Postives = 126/201 (62.69%), Query Frame = 0
Query: 1 MDNAQSSGSSSSTMNVPSFNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGY 60
M NAQ + + S ++ F+ P LNQ+LNQ+ T+KL+R NYLLW+ +ALPIL+ +KLEG+
Sbjct: 1 MANAQPTAAPPS-LSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGH 60
Query: 61 ILGEITCSPKFI--GQSTNETNTIVGATTTEGTSSQTT--TVRSI--------------L 120
+ GE C F+ S+N T T GA T G SS T V S+ L
Sbjct: 61 LTGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGWL 120
Query: 121 YNSMTLEVATQLMGYEHSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRL 180
YNSMT +VA QLMG+ + +LW Q FGVQSRAEED+LRQ Q TRK NT M EYL +
Sbjct: 121 YNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLV 180
Query: 181 MKMHSDNLGMVGSLVPERALV 184
MK + DNLG VGS VP RAL+
Sbjct: 181 MKTNVDNLGQVGSPVPRRALI 200
BLAST of PI0014284 vs. NCBI nr
Match:
KAA0067279.1 (uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa])
HSP 1 Score: 158.3 bits (399), Expect = 7.2e-35
Identity = 91/185 (49.19%), Postives = 118/185 (63.78%), Query Frame = 0
Query: 18 SFNTPSLNQLLNQVTTIKLERGNYLLWRIVALPILRSHKLEGYILGEITCSPKFIGQSTN 77
SF P LNQ+LNQ+TTIKL+RGNYLLW+ +ALPIL+S+KL ++ GE C PK I +T
Sbjct: 16 SFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILKSYKLNSHLFGESPCLPKIIMLTTQ 75
Query: 78 ETNTIV--GATTTEGTSSQTTTVRSI-----------------LYNSMTLEVATQLMGYE 137
+IV ++ TSS +T V ++ LYNSMT EV QLMG+
Sbjct: 76 PNESIVENAGEPSQETSSSSTAVVTVNPKYERWITTDLLLLGWLYNSMTPEVTIQLMGFT 135
Query: 138 HSLELWTTIQRLFGVQSRAEEDYLRQTFQQTRKSNTTMSEYLRLMKMHSDNLGMVGSLVP 184
++ +LW Q LFG+QSRA+ED+L QTFQ T+K N M EYLR MK + +NLG SLVP
Sbjct: 136 NAKDLWEATQDLFGIQSRAKEDFLHQTFQTTKKGNLNMEEYLRTMKNNVNNLGQADSLVP 195
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SIT7 | 3.1e-44 | 50.44 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1DCW4 | 1.7e-42 | 50.00 | uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A5D3BCH9 | 1.2e-35 | 49.75 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7VPY0 | 3.5e-35 | 49.19 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1D5J0 | 4.0e-31 | 66.36 | uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
Match Name | E-value | Identity | Description | |
KAA0026100.1 | 6.5e-44 | 50.44 | uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa] | [more] |
XP_022151683.1 | 3.6e-42 | 50.00 | uncharacterized protein LOC111019598 [Momordica charantia] | [more] |
XP_038902487.1 | 1.1e-38 | 49.76 | uncharacterized protein LOC120089143 [Benincasa hispida] | [more] |
TYJ96311.1 | 2.5e-35 | 49.75 | uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa] | [more] |
KAA0067279.1 | 7.2e-35 | 49.19 | uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |