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PI0014199 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCCAACAACCAGAAGATGGGATTCTTGTTTGTGAGCCTCATGTTTATCATTGTATTTTTAATCATCTTCCTTTTTCATTACTACCATTACCGCCTTGGGCTTTACCAAACAAGAACCATAGACATCGAGCAACGACTCCACGAACACCGTGCAATGCAACTCTTTACTCAACTTCGAGCTGAAATCATAAGGCAACGGCAGACTACGACCCAATCGAATAACACGACGGAAGAACCTTCTTCTGCTGTCATGACGATCGCTTACAAAAACACGATTAAGATGACGGATGAATCCTGCTGCGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATAAGGATTGTATGGATGGATGGCTTAAGATTGAGAGCAGTTGCCCATTATGTCGTTGTTTGGTTCATGATCTATCTCATAATATTACTAATTCCCAAGAAAATGAAGCTTAG ATGAATTCCAACAACCAGAAGATGGGATTCTTGTTTGTGAGCCTCATGTTTATCATTGTATTTTTAATCATCTTCCTTTTTCATTACTACCATTACCGCCTTGGGCTTTACCAAACAAGAACCATAGACATCGAGCAACGACTCCACGAACACCGTGCAATGCAACTCTTTACTCAACTTCGAGCTGAAATCATAAGGCAACGGCAGACTACGACCCAATCGAATAACACGACGGAAGAACCTTCTTCTGCTGTCATGACGATCGCTTACAAAAACACGATTAAGATGACGGATGAATCCTGCTGCGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATAAGGATTGTATGGATGGATGGCTTAAGATTGAGAGCAGTTGCCCATTATGTCGTTGTTTGGTTCATGATCTATCTCATAATATTACTAATTCCCAAGAAAATGAAGCTTAG ATGAATTCCAACAACCAGAAGATGGGATTCTTGTTTGTGAGCCTCATGTTTATCATTGTATTTTTAATCATCTTCCTTTTTCATTACTACCATTACCGCCTTGGGCTTTACCAAACAAGAACCATAGACATCGAGCAACGACTCCACGAACACCGTGCAATGCAACTCTTTACTCAACTTCGAGCTGAAATCATAAGGCAACGGCAGACTACGACCCAATCGAATAACACGACGGAAGAACCTTCTTCTGCTGTCATGACGATCGCTTACAAAAACACGATTAAGATGACGGATGAATCCTGCTGCGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATAAGGATTGTATGGATGGATGGCTTAAGATTGAGAGCAGTTGCCCATTATGTCGTTGTTTGGTTCATGATCTATCTCATAATATTACTAATTCCCAAGAAAATGAAGCTTAG MNSNNQKMGFLFVSLMFIIVFLIIFLFHYYHYRLGLYQTRTIDIEQRLHEHRAMQLFTQLRAEIIRQRQTTTQSNNTTEEPSSAVMTIAYKNTIKMTDESCCAICIEEFEDEEICGVVESCGHCFHKDCMDGWLKIESSCPLCRCLVHDLSHNITNSQENEA Homology
BLAST of PI0014199 vs. ExPASy Swiss-Prot
Match: P0CH01 (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy Swiss-Prot
Match: Q9C7E9 (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 9.3e-09 Identity = 34/107 (31.78%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 27/65 (41.54%), Postives = 38/65 (58.46%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy Swiss-Prot
Match: Q9C7I1 (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08 Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy TrEMBL
Match: A0A5A7VMH1 (RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00560 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 8.7e-50 Identity = 113/148 (76.35%), Postives = 122/148 (82.43%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy TrEMBL
Match: A0A5D3BE50 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002270 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 4.3e-49 Identity = 112/148 (75.68%), Postives = 121/148 (81.76%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy TrEMBL
Match: A0A1S4E1K2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 8.1e-32 Identity = 76/102 (74.51%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy TrEMBL
Match: A0A6J1I5C3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 PE=3 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 5.8e-30 Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 0
BLAST of PI0014199 vs. ExPASy TrEMBL
Match: A0A6J1HJU0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742 PE=3 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 6.5e-29 Identity = 78/158 (49.37%), Postives = 107/158 (67.72%), Query Frame = 0
BLAST of PI0014199 vs. NCBI nr
Match: KAA0067736.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]) HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49 Identity = 113/148 (76.35%), Postives = 122/148 (82.43%), Query Frame = 0
BLAST of PI0014199 vs. NCBI nr
Match: TYJ97407.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]) HSP 1 Score: 204.1 bits (518), Expect = 8.9e-49 Identity = 112/148 (75.68%), Postives = 121/148 (81.76%), Query Frame = 0
BLAST of PI0014199 vs. NCBI nr
Match: KAG6583431.1 (RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146.7 bits (369), Expect = 1.7e-31 Identity = 83/160 (51.88%), Postives = 109/160 (68.12%), Query Frame = 0
BLAST of PI0014199 vs. NCBI nr
Match: XP_016902103.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]) HSP 1 Score: 146.7 bits (369), Expect = 1.7e-31 Identity = 76/102 (74.51%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of PI0014199 vs. NCBI nr
Match: KAG7019192.1 (E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.4 bits (363), Expect = 8.3e-31 Identity = 81/160 (50.62%), Postives = 108/160 (67.50%), Query Frame = 0
BLAST of PI0014199 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11 Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of PI0014199 vs. TAIR 10
Match: AT2G46495.1 (RING/U-box superfamily protein ) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 0
BLAST of PI0014199 vs. TAIR 10
Match: AT1G28040.1 (RING/U-box superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 6.6e-10 Identity = 34/107 (31.78%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of PI0014199 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10 Identity = 27/65 (41.54%), Postives = 38/65 (58.46%), Query Frame = 0
BLAST of PI0014199 vs. TAIR 10
Match: AT5G41430.1 (RING/U-box superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-09 Identity = 24/48 (50.00%), Postives = 30/48 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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