PI0013964 (gene) Melon (PI 482460) v1

Overview


Name	PI0013964
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	VQ motif-containing protein 20
Location	chr02: 22736457 .. 22737259 (-)
RNA-Seq Expression	PI0013964
Synteny	PI0013964

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCCTCAACAACAACAACAAAAAATCCATGGAAAAAGGGATAATCAAATCAACAACAATGGCAATAAACCATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAAACTTCCTGTTCTACAAATAATACTTCTTCTCCTTCTTCCTCTTCATCTTCCACCACCACCACCTCTCTTGTCAATGGCGTCACTGCTGCGAAGCCGCCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGATGAAGCTTCTACTACGAAGGCCACAACGAAATCCGTCGTGGATGAGAATAATAACAAAGGATCTAAAGCTGTTGTGAATGATGATAATGAATCGTCGTCCGTTGTGACAACGGATGAAAATTGTTGCGGCAGTGGTGGAAGCGGTGTGATGGAAGTTGGTCAGGTTAATTCGTGTTTTGGTCCGGCAATTTTTGAACCACCGCCGCCACCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCGATTTATAGGCCAAATTCGACGGAGTTTTTGTGCGCGAATCAACCAATTTTTAACTATGATGATTCTCTGCTTTTTGGGTGCAACAGTGTTAATGATTTCTGCGAATATAGTGAATTTTAGGATGATTTTTAAAAAAAATTTAAATAGTTGAGTTCGGGAGAGGGATTAATTATTTGATTCCATTTGATTTTAATGTAATAAATTTTTTATTATTC

mRNA sequence

ATGAGCCCTCAACAACAACAACAAAAAATCCATGGAAAAAGGGATAATCAAATCAACAACAATGGCAATAAACCATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAAACTTCCTGTTCTACAAATAATACTTCTTCTCCTTCTTCCTCTTCATCTTCCACCACCACCACCTCTCTTGTCAATGGCGTCACTGCTGCGAAGCCGCCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGATGAAGCTTCTACTACGAAGGCCACAACGAAATCCGTCGTGGATGAGAATAATAACAAAGGATCTAAAGCTGTTGTGAATGATGATAATGAATCGTCGTCCGTTGTGACAACGGATGAAAATTGTTGCGGCAGTGGTGGAAGCGGTGTGATGGAAGTTGGTCAGGTTAATTCGTGTTTTGGTCCGGCAATTTTTGAACCACCGCCGCCACCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCGATTTATAGGCCAAATTCGACGGAGTTTTTGTGCGCGAATCAACCAATTTTTAACTATGATGATTCTCTGCTTTTTGGGTGCAACAGTGTTAATGATTTCTGCGAATATAGTGAATTTTAGGATGATTTTTAAAAAAAATTTAAATAGTTGAGTTCGGGAGAGGGATTAATTATTTGATTCCATTTGATTTTAATGTAATAAATTTTTTATTATTC

Coding sequence (CDS)

ATGAGCCCTCAACAACAACAACAAAAAATCCATGGAAAAAGGGATAATCAAATCAACAACAATGGCAATAAACCATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAAACTTCCTGTTCTACAAATAATACTTCTTCTCCTTCTTCCTCTTCATCTTCCACCACCACCACCTCTCTTGTCAATGGCGTCACTGCTGCGAAGCCGCCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGATGAAGCTTCTACTACGAAGGCCACAACGAAATCCGTCGTGGATGAGAATAATAACAAAGGATCTAAAGCTGTTGTGAATGATGATAATGAATCGTCGTCCGTTGTGACAACGGATGAAAATTGTTGCGGCAGTGGTGGAAGCGGTGTGATGGAAGTTGGTCAGGTTAATTCGTGTTTTGGTCCGGCAATTTTTGAACCACCGCCGCCACCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCGATTTATAGGCCAAATTCGACGGAGTTTTTGTGCGCGAATCAACCAATTTTTAACTATGATGATTCTCTGCTTTTTGGGTGCAACAGTGTTAATGATTTCTGCGAATATAGTGAATTTTAG

Protein sequence

MSPQQQQQKIHGKRDNQINNNGNKPLCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSSSTTTTSLVNGVTAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTTKATTKSVVDENNNKGSKAVVNDDNESSSVVTTDENCCGSGGSGVMEVGQVNSCFGPAIFEPPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCNSVNDFCEYSEF

Homology

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BLAST of PI0013964 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29
Identity = 107/281 (38.08%), Postives = 139/281 (49.47%), Query Frame = 0


Query: 11  HGKRDNQINNNG-----NKPLCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSSSTTTTSL 70
           H KR+   NN+G     +    PP LK+NKDSH+I+K         SPSS SS       
Sbjct: 21  HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK-------PPSPSSFSS------- 80

Query: 71  VNGVTAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDE-----ASTTKAT 130
                AAKP  RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD++     A T    
Sbjct: 81  -----AAKP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGV 140

Query: 131 TKSV--------VDENNNKG-----------------------SKAVVNDDNESSSVVTT 190
            KS+        VD  NN+                        +  ++++D+ESSSV+TT
Sbjct: 141 VKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSESSSVITT 200

Query: 191 DENCCGSGGSGVMEVGQVNSCFGPAIF--------EPPPPPPPPQLAN-------SYLTN 234
           +EN        + E GQVNS    +           PPPPPPPP + +       +YL  
Sbjct: 201 EEN--------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINYGAYLPT 260

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BLAST of PI0013964 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.3e-05
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 43  TSCSTNNTSSPSSSSSSTTTTSLVNGVTAAKPPQRH----PVIIYTHSPKIIHTHPRDFM 102
           T C+  N S PSS   +  + ++    +    P+ H    PVIIY HSPK+IHT   DFM
Sbjct: 4   TRCNEINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFM 63

Query: 103 ALVQKLTGMS----RSDDEASTTKATTKSVVDENN 130
           ALVQ+LTG+     R+  E+S++  T +  V ++N
Sbjct: 64  ALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDN 98

[Close]

BLAST of PI0013964 vs. ExPASy TrEMBL
Match: A0A1S3BXM8 (VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 9.5e-98
Identity = 210/248 (84.68%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNGNKP-LCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSSS 60
           MSPQQQ   IHGKRDNQINNNGNKP LCPPPLKINKDSHLIRKTS S+NNT+S S SSSS
Sbjct: 1   MSPQQQ---IHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTS-SPSSSS 60

Query: 61  TTTTSLVNGV-----TAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-E 120
           ++TTSLVNGV      AAKP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD E
Sbjct: 61  SSTTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHE 120

Query: 121 ASTTKATTKSVVDE--NNNKGSKAVVNDDNESSSVVTTDENCC-GSGGSGVMEVGQVNSC 180
           AST  ATTK VVDE  NNNKGSKAVV+DDNESSSVVTTDENCC G GGSG+MEVGQVNSC
Sbjct: 121 ASTKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSC 180

Query: 181 FGPAIFEPPPP---PPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCNS-V 235
           FGP IFEPPPP   PPPPQLANSYLTNIPIY PNS EFLCANQPIFNYDDSLLFG N  V
Sbjct: 181 FGPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVV 240

[Close]

BLAST of PI0013964 vs. ExPASy TrEMBL
Match: A0A0A0LKA6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.8e-92
Identity = 202/244 (82.79%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNGNKPLCPPP-LKINKDSHLIRKTSCSTNNTSSPSSSSSS 60
           MSPQQQQQ IHGKRDNQ NNN NKPL PPP LKINKDSHLIRK+S S++NTSSPSSSSSS
Sbjct: 1   MSPQQQQQ-IHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSS-SSSNTSSPSSSSSS 60

Query: 61  TTTTSLVNGV---TAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAST 120
             TTSL+NGV    AAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 
Sbjct: 61  --TTSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS- 120

Query: 121 TKATTKSVVDENNNKGSKAVVNDDNESSSVVTTDENCC-GSGGSGVMEVGQVNSCFGPAI 180
           TKAT KSVVDE NNK SK VVNDDNESSSVVTTDENCC GSG SG +E GQVNSCFGPAI
Sbjct: 121 TKATAKSVVDE-NNKASK-VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAI 180

Query: 181 FEPPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCN----SVNDFCE 236
           FEPPPPPPPPQLA+SYL+NIP+Y PNSTEFLC NQPIFNYDDSLLFG N    S N   +
Sbjct: 181 FEPPPPPPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSD 237

[Close]

BLAST of PI0013964 vs. ExPASy TrEMBL
Match: A0A5A7V0G0 (VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001740 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.8e-89
Identity = 195/245 (79.59%), Postives = 209/245 (85.31%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNGNKPLCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSSST 60
           MSPQ QQQ+IHGKRDNQINNN NKPL PP LKINKDSHLIRK+S S++NTSSPSSSSSS 
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSS-SSSNTSSPSSSSSS- 60

Query: 61  TTTSLVNGV--TAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTTK 120
            TTSLVNGV    AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS TK
Sbjct: 61  -TTSLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS-TK 120

Query: 121 ATTKSVVDENNNKGSKAVVNDDNESSSVVTTDENCC-GSGGSGVMEVGQVNSCFGPAIFE 180
           AT KSV  + NNK SK VVNDDNESSSV+TTDENCC GSG SG +E GQVNSCFGPA FE
Sbjct: 121 ATAKSV--DENNKVSK-VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFE 180

Query: 181 --PPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCNSV-----NDFC 236
             PPPPPPPPQLANSYLTN+P+Y PNSTEFLC NQPIFNYDDSLLFG +++     N   
Sbjct: 181 PPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGIS 238

[Close]

BLAST of PI0013964 vs. ExPASy TrEMBL
Match: A0A1S3BCI6 (VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.6e-89
Identity = 195/245 (79.59%), Postives = 209/245 (85.31%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNGNKPLCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSSST 60
           MSPQ QQQ+IHGKRDNQINNN NKPL PP LKINKDSHLIRK+S S++NTSSPSSSSSS 
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSS-SSSNTSSPSSSSSS- 60

Query: 61  TTTSLVNGV--TAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTTK 120
            TTSLVNGV    AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS TK
Sbjct: 61  -TTSLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS-TK 120

Query: 121 ATTKSVVDENNNKGSKAVVNDDNESSSVVTTDENCC-GSGGSGVMEVGQVNSCFGPAIFE 180
           AT KSV  + NNK SK VVNDDNESSSV+TTDENCC GSG SG +E GQVNSCFGPA FE
Sbjct: 121 ATAKSV--DENNKISK-VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFE 180

Query: 181 --PPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCNSV-----NDFC 236
             PPPPPPPPQLANSYLTN+P+Y PNSTEFLC NQPIFNYDDSLLFG +++     N   
Sbjct: 181 PPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGIS 238

[Close]

BLAST of PI0013964 vs. ExPASy TrEMBL
Match: A0A0A0LPK7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.2e-86
Identity = 191/241 (79.25%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNG-NKP-LCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSS 60
           MSPQQQQQ+IHGK DNQI NNG NKP LCPPPLKINKDSHLIRKTS S++NTSSPSSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTS-SSSNTSSPSSSSS 60

Query: 61  STTTTSLVNGVTAA---KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
           S  TTSL NGV AA    PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+        
Sbjct: 61  S--TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGI-------C 120

Query: 121 TTKATTKSVVDENNNKGSKAVVNDDNESSSVVTTDENCCGSGGSGVMEVGQVNSCFGPAI 180
             KA               AVVNDDNESSSVVTTDENCCG GGSG+MEVGQVNSCFGPAI
Sbjct: 121 CCKA---------------AVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVNSCFGPAI 180

Query: 181 FEPPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCN-SVNDFCEYSE 236
           FE  PPPPPPQLANSYLTNIPIY PNSTEFLC NQPIFNYDDSLLFG N SVNDFCEYSE
Sbjct: 181 FE--PPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSVNDFCEYSE 214

[Close]

BLAST of PI0013964 vs. NCBI nr
Match: XP_004138347.3 (VQ motif-containing protein 20 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.5e-97
Identity = 215/251 (85.66%), Postives = 219/251 (87.25%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNG-NKP-LCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSS 60
           MSPQQQQQ+IHGK DNQI NNG NKP LCPPPLKINKDSHLIRKTS S++NTSSPSSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTS-SSSNTSSPSSSSS 60

Query: 61  STTTTSLVNGVTAA---KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRS--DDE 120
           S  TTSL NGV AA    PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRS  D E
Sbjct: 61  S--TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHE 120

Query: 121 ASTTK-ATTKSVVDE------NNNKGSK-AVVNDDNESSSVVTTDENCCGSGGSGVMEVG 180
           ASTTK ATTKS VDE      NNNKGSK AVVNDDNESSSVVTTDENCCG GGSG+MEVG
Sbjct: 121 ASTTKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVG 180

Query: 181 QVNSCFGPAIFEPPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCN- 236
           QVNSCFGPAIFE  PPPPPPQLANSYLTNIPIY PNSTEFLC NQPIFNYDDSLLFG N 
Sbjct: 181 QVNSCFGPAIFE--PPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNR 240

[Close]

BLAST of PI0013964 vs. NCBI nr
Match: XP_008453685.1 (PREDICTED: VQ motif-containing protein 20 [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97
Identity = 210/248 (84.68%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNGNKP-LCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSSS 60
           MSPQQQ   IHGKRDNQINNNGNKP LCPPPLKINKDSHLIRKTS S+NNT+S S SSSS
Sbjct: 1   MSPQQQ---IHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTS-SPSSSS 60

Query: 61  TTTTSLVNGV-----TAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-E 120
           ++TTSLVNGV      AAKP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD E
Sbjct: 61  SSTTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHE 120

Query: 121 ASTTKATTKSVVDE--NNNKGSKAVVNDDNESSSVVTTDENCC-GSGGSGVMEVGQVNSC 180
           AST  ATTK VVDE  NNNKGSKAVV+DDNESSSVVTTDENCC G GGSG+MEVGQVNSC
Sbjct: 121 ASTKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSC 180

Query: 181 FGPAIFEPPPP---PPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCNS-V 235
           FGP IFEPPPP   PPPPQLANSYLTNIPIY PNS EFLCANQPIFNYDDSLLFG N  V
Sbjct: 181 FGPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRVV 240

[Close]

BLAST of PI0013964 vs. NCBI nr
Match: XP_038876677.1 (VQ motif-containing protein 20 [Benincasa hispida])

HSP 1 Score: 356.3 bits (913), Expect = 2.0e-94
Identity = 207/250 (82.80%), Postives = 214/250 (85.60%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQ---INN---NGNKPLCPPPLKINKDSHLIRKTSCSTNNTSSPS 60
           MSPQ QQQ +HGKRDNQ   INN   NGNKPLCPPPLKINKDSHLIRK+S S++NTSSPS
Sbjct: 1   MSPQPQQQ-LHGKRDNQNQSINNGNGNGNKPLCPPPLKINKDSHLIRKSS-SSSNTSSPS 60

Query: 61  SSSSSTTTTSLVNGVTAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEA 120
           SSSSS  TTSLVNGV   KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEA
Sbjct: 61  SSSSS--TTSLVNGV---KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEA 120

Query: 121 STTKATTKSVVDENNNKGSKAVVNDDNESSSVVTTDENCCGSGGSGVMEVGQVNSCFGPA 180
           S TKATTKS VDENN    KAVVNDDNESSSVVTTDENCCG GGSGV+E GQVNSCFG A
Sbjct: 121 S-TKATTKS-VDENNKGSKKAVVNDDNESSSVVTTDENCCG-GGSGVVEGGQVNSCFGAA 180

Query: 181 IFEPPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQP-IFNYDDSLLFGC--------NS 236
           IFEPPPPPPPPQLANSYLTNIP+YRPNSTEFLC NQP  FNYDDSLLFG         N 
Sbjct: 181 IFEPPPPPPPPQLANSYLTNIPVYRPNSTEFLCTNQPSFFNYDDSLLFGAHNIPSLSSNG 240

[Close]

BLAST of PI0013964 vs. NCBI nr
Match: KGN62345.1 (hypothetical protein Csa_018596 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 1.6e-91
Identity = 202/244 (82.79%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNGNKPLCPPP-LKINKDSHLIRKTSCSTNNTSSPSSSSSS 60
           MSPQQQQQ IHGKRDNQ NNN NKPL PPP LKINKDSHLIRK+S S++NTSSPSSSSSS
Sbjct: 1   MSPQQQQQ-IHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSS-SSSNTSSPSSSSSS 60

Query: 61  TTTTSLVNGV---TAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAST 120
             TTSL+NGV    AAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 
Sbjct: 61  --TTSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS- 120

Query: 121 TKATTKSVVDENNNKGSKAVVNDDNESSSVVTTDENCC-GSGGSGVMEVGQVNSCFGPAI 180
           TKAT KSVVDE NNK SK VVNDDNESSSVVTTDENCC GSG SG +E GQVNSCFGPAI
Sbjct: 121 TKATAKSVVDE-NNKASK-VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAI 180

Query: 181 FEPPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCN----SVNDFCE 236
           FEPPPPPPPPQLA+SYL+NIP+Y PNSTEFLC NQPIFNYDDSLLFG N    S N   +
Sbjct: 181 FEPPPPPPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSD 237

[Close]

BLAST of PI0013964 vs. NCBI nr
Match: KAA0061038.1 (VQ motif-containing protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 338.2 bits (866), Expect = 5.7e-89
Identity = 195/245 (79.59%), Postives = 209/245 (85.31%), Query Frame = 0


Query: 1   MSPQQQQQKIHGKRDNQINNNGNKPLCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSSST 60
           MSPQ QQQ+IHGKRDNQINNN NKPL PP LKINKDSHLIRK+S S++NTSSPSSSSSS 
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSLKINKDSHLIRKSS-SSSNTSSPSSSSSS- 60

Query: 61  TTTSLVNGV--TAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTTK 120
            TTSLVNGV    AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS TK
Sbjct: 61  -TTSLVNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS-TK 120

Query: 121 ATTKSVVDENNNKGSKAVVNDDNESSSVVTTDENCC-GSGGSGVMEVGQVNSCFGPAIFE 180
           AT KSV  + NNK SK VVNDDNESSSV+TTDENCC GSG SG +E GQVNSCFGPA FE
Sbjct: 121 ATAKSV--DENNKVSK-VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFE 180

Query: 181 --PPPPPPPPQLANSYLTNIPIYRPNSTEFLCANQPIFNYDDSLLFGCNSV-----NDFC 236
             PPPPPPPPQLANSYLTN+P+Y PNSTEFLC NQPIFNYDDSLLFG +++     N   
Sbjct: 181 PPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGIS 238

[Close]

BLAST of PI0013964 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 131.7 bits (330), Expect = 7.6e-31
Identity = 107/281 (38.08%), Postives = 139/281 (49.47%), Query Frame = 0


Query: 11  HGKRDNQINNNG-----NKPLCPPPLKINKDSHLIRKTSCSTNNTSSPSSSSSSTTTTSL 70
           H KR+   NN+G     +    PP LK+NKDSH+I+K         SPSS SS       
Sbjct: 21  HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK-------PPSPSSFSS------- 80

Query: 71  VNGVTAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDE-----ASTTKAT 130
                AAKP  RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD++     A T    
Sbjct: 81  -----AAKP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGV 140

Query: 131 TKSV--------VDENNNKG-----------------------SKAVVNDDNESSSVVTT 190
            KS+        VD  NN+                        +  ++++D+ESSSV+TT
Sbjct: 141 VKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSESSSVITT 200

Query: 191 DENCCGSGGSGVMEVGQVNSCFGPAIF--------EPPPPPPPPQLAN-------SYLTN 234
           +EN        + E GQVNS    +           PPPPPPPP + +       +YL  
Sbjct: 201 EEN--------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINYGAYLPT 260

[Close]

BLAST of PI0013964 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.8e-06
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 43  TSCSTNNTSSPSSSSSSTTTTSLVNGVTAAKPPQRH----PVIIYTHSPKIIHTHPRDFM 102
           T C+  N S PSS   +  + ++    +    P+ H    PVIIY HSPK+IHT   DFM
Sbjct: 4   TRCNEINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFM 63

Query: 103 ALVQKLTGMS----RSDDEASTTKATTKSVVDENN 130
           ALVQ+LTG+     R+  E+S++  T +  V ++N
Sbjct: 64  ALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDN 98

[Close]

BLAST of PI0013964 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 48.5 bits (114), Expect = 8.4e-06
Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 0


Query: 28  PPPLKINKDSHLIRKTSCSTNNTSSPSSSSSSTTTTSLVNGVTAAKPPQRHPVIIYTHSP 87
           P PLK+  DSH I K          P    +     S       ++PP   PVIIYT SP
Sbjct: 16  PIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPS------QSRPPP-GPVIIYTVSP 75

Query: 88  KIIHTHPRDFMALVQKLTGMSRSDDEASTTKATTKSVVD 127
           +IIHTHP +FM LVQ+LTG + +   +S+  ++T +  D
Sbjct: 76  RIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKD 107

The following BLAST results are available for this feature:

BLAST of PI0013964 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS54	1.1e-29	38.08	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	5.3e-05	38.95	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of PI0013964 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BXM8	9.5e-98	84.68	VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1	[more]
A0A0A0LKA6	7.8e-92	82.79	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=...	[more]
A0A5A7V0G0	2.8e-89	79.59	VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BCI6	3.6e-89	79.59	VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4...	[more]
A0A0A0LPK7	2.2e-86	79.25	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=...	[more]

BLAST of PI0013964 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138347.3	1.5e-97	85.66	VQ motif-containing protein 20 [Cucumis sativus]	[more]
XP_008453685.1	2.0e-97	84.68	PREDICTED: VQ motif-containing protein 20 [Cucumis melo]	[more]
XP_038876677.1	2.0e-94	82.80	VQ motif-containing protein 20 [Benincasa hispida]	[more]
KGN62345.1	1.6e-91	82.79	hypothetical protein Csa_018596 [Cucumis sativus]	[more]
KAA0061038.1	5.7e-89	79.59	VQ motif-containing protein 20-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0013964 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18360.1	7.6e-31	38.08	VQ motif-containing protein	[more]
AT1G68450.1	3.8e-06	38.95	VQ motif-containing protein	[more]
AT1G21326.1	8.4e-06	38.38	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 84..108 e-value: 1.6E-11 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..65
IPR039832	VQ motif-containing protein 20	PANTHER	PTHR33143:SF4	VQ MOTIF-CONTAINING PROTEIN 20	coord: 1..234
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 1..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013964.1	PI0013964.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding