PI0013943 (gene) Melon (PI 482460) v1

Overview


Name	PI0013943
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plant transposase
Location	chr06: 19656324 .. 19656964 (+)
RNA-Seq Expression	PI0013943
Synteny	PI0013943

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGTAAGTTATCTTTAAATGTCTATTGAAATAGAAAATATACATATATATAAATATGTATACATAGACTATACTCATTTCAATGTTTTATGTCTTAGGATTCTGGTAAGGAAGAAATTGGACCAACCGTTGGTAAGAAATCAAAAAGACCTTGTACTGCTACACATGCATTAGAACGACAGCGATCTGATCGAACCTTGGGCAAAACGTCGTGGAGATTTGCAAAGTCCTTCAGTATGGACTTAACTCAACCCGGTAGCGATTATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGACCCTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCTTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTGCACATCTTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGTTGCTCGTACTAGATCAGCAATTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTCGGAGTTGATACGAACATGCCTGTTCGCACTAGATGTAGCGTTGAGTATTAA

mRNA sequence

ATGCATGATTCTGGTAAGGAAGAAATTGGACCAACCGTTGGTAAGAAATCAAAAAGACCTTGTACTGCTACACATGCATTAGAACGACAGCGATCTGATCGAACCTTGGGCAAAACGTCGTGGAGATTTGCAAAGTCCTTCAGTATGGACTTAACTCAACCCGGTAGCGATTATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGACCCTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCTTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTGCACATCTTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGTTGCTCGTACTAGATCAGCAATTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTCGGAGTTGATACGAACATGCCTGTTCGCACTAGATGTAGCGTTGAGTATTAA

Coding sequence (CDS)

ATGCATGATTCTGGTAAGGAAGAAATTGGACCAACCGTTGGTAAGAAATCAAAAAGACCTTGTACTGCTACACATGCATTAGAACGACAGCGATCTGATCGAACCTTGGGCAAAACGTCGTGGAGATTTGCAAAGTCCTTCAGTATGGACTTAACTCAACCCGGTAGCGATTATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGACCCTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCTTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTGCACATCTTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGTTGCTCGTACTAGATCAGCAATTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTCGGAGTTGATACGAACATGCCTGTTCGCACTAGATGTAGCGTTGAGTATTAA

Protein sequence

MHDSGKEEIGPTVGKKSKRPCTATHALERQRSDRTLGKTSWRFAKSFSMDLTQPGSDYEENEEEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLDCEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAIRRLPIEEVQSQSEENVVGVDTNMPVRTRCSVEY

Homology

[Close]

BLAST of PI0013943 vs. ExPASy TrEMBL
Match: A0A5D3BZI8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002220 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.5e-31
Identity = 82/130 (63.08%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 3   DSGKEEIGPTVGKKSKRPCTATHALERQRSDRTLGKTSWRFAKSFSMDLTQPGSDYEENE 62
           D  KE+ G TVGKK KRP + TH LER+RSDRTL KTSWRFAKSFSMDLTQPGSD EENE
Sbjct: 80  DFDKEKSGQTVGKKLKRPRSITHTLERRRSDRTLVKTSWRFAKSFSMDLTQPGSDDEENE 139

Query: 63  EEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLDCEEAATPLPSSHVN 122
            EAL L                    EREI+ETSP  D LHH+N+D EEA TPLPSSHVN
Sbjct: 140 GEALHLR-------------------EREIKETSPLPDTLHHSNVDYEEATTPLPSSHVN 190

Query: 123 EIAHLQSKRP 133
              H Q+KRP
Sbjct: 200 ATIHPQAKRP 190

[Close]

BLAST of PI0013943 vs. ExPASy TrEMBL
Match: A0A0A0LMZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093830 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-22
Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 89  EREIRETSPSLDPLHHNNLDCEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAI 148
           EREIRETSP  DPLHHNN+D EEA TPLPS+HVN + H QSKRPQNRPLDSP ARTRSA+
Sbjct: 9   EREIRETSPYSDPLHHNNMDFEEATTPLPSTHVNIMIHPQSKRPQNRPLDSPAARTRSAV 68

Query: 149 RRLPIEEVQSQSEEN 164
            +LPIEEVQ + EEN
Sbjct: 69  CKLPIEEVQPELEEN 83

[Close]

BLAST of PI0013943 vs. ExPASy TrEMBL
Match: A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-20
Identity = 66/115 (57.39%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 49  MDLTQPGSDYEENEEEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLD 108
           MDLTQP +D EENE EAL L                    E+EIRETSP  DPL      
Sbjct: 1   MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60

Query: 109 CEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAIRRLPIEEVQSQSEEN 164
            EEA TPLPSSHVN   H QS+RP NRPLDSP  RTRSA+R+LP+EEV+SQ EEN
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEEN 90

[Close]

BLAST of PI0013943 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-20
Identity = 66/115 (57.39%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 49  MDLTQPGSDYEENEEEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLD 108
           MDLTQP +D EENE EAL L                    E+EIRETSP  DPL      
Sbjct: 1   MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60

Query: 109 CEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAIRRLPIEEVQSQSEEN 164
            EEA TPLPSSHVN   H QS+RP NRPLDSP  RTRSA+R+LP+EEV+SQ EEN
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEEN 90

[Close]

BLAST of PI0013943 vs. ExPASy TrEMBL
Match: A0A5A7UI65 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11091G00020 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.7e-20
Identity = 65/115 (56.52%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 49  MDLTQPGSDYEENEEEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLD 108
           MDLTQ  +D EENE EAL L                    E+EIRETSP LDPL      
Sbjct: 1   MDLTQSSTDDEENEGEALLLR-------------------EKEIRETSPLLDPL------ 60

Query: 109 CEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAIRRLPIEEVQSQSEEN 164
            EEA TPLPSSHVN   H QS+RP NRPLDSP  RTRSA+R+LP+E+V+SQ EEN
Sbjct: 61  SEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEKVESQLEEN 90

[Close]

BLAST of PI0013943 vs. NCBI nr
Match: TYK04585.1 (hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa])

HSP 1 Score: 144.4 bits (363), Expect = 9.3e-31
Identity = 82/130 (63.08%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 3   DSGKEEIGPTVGKKSKRPCTATHALERQRSDRTLGKTSWRFAKSFSMDLTQPGSDYEENE 62
           D  KE+ G TVGKK KRP + TH LER+RSDRTL KTSWRFAKSFSMDLTQPGSD EENE
Sbjct: 80  DFDKEKSGQTVGKKLKRPRSITHTLERRRSDRTLVKTSWRFAKSFSMDLTQPGSDDEENE 139

Query: 63  EEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLDCEEAATPLPSSHVN 122
            EAL L                    EREI+ETSP  D LHH+N+D EEA TPLPSSHVN
Sbjct: 140 GEALHLR-------------------EREIKETSPLPDTLHHSNVDYEEATTPLPSSHVN 190

Query: 123 EIAHLQSKRP 133
              H Q+KRP
Sbjct: 200 ATIHPQAKRP 190

[Close]

BLAST of PI0013943 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-20
Identity = 66/115 (57.39%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 49  MDLTQPGSDYEENEEEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLD 108
           MDLTQP +D EENE EAL L                    E+EIRETSP  DPL      
Sbjct: 1   MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60

Query: 109 CEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAIRRLPIEEVQSQSEEN 164
            EEA TPLPSSHVN   H QS+RP NRPLDSP  RTRSA+R+LP+EEV+SQ EEN
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEEN 90

[Close]

BLAST of PI0013943 vs. NCBI nr
Match: KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-20
Identity = 66/115 (57.39%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 49  MDLTQPGSDYEENEEEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLD 108
           MDLTQP +D EENE EAL L                    E+EIRETSP  DPL      
Sbjct: 1   MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60

Query: 109 CEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAIRRLPIEEVQSQSEEN 164
            EEA TPLPSSHVN   H QS+RP NRPLDSP  RTRSA+R+LP+EEV+SQ EEN
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEEN 90

[Close]

BLAST of PI0013943 vs. NCBI nr
Match: KAA0053956.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 9.7e-20
Identity = 65/115 (56.52%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 49  MDLTQPGSDYEENEEEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLD 108
           MDLTQ  +D EENE EAL L                    E+EIRETSP LDPL      
Sbjct: 1   MDLTQSSTDDEENEGEALLLR-------------------EKEIRETSPLLDPL------ 60

Query: 109 CEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAIRRLPIEEVQSQSEEN 164
            EEA TPLPSSHVN   H QS+RP NRPLDSP  RTRSA+R+LP+E+V+SQ EEN
Sbjct: 61  SEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEKVESQLEEN 90

[Close]

BLAST of PI0013943 vs. NCBI nr
Match: KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-19
Identity = 66/115 (57.39%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 49  MDLTQPGSDYEENEEEALPLTKRPDSKTLNDTDNVAKPSIEREIRETSPSLDPLHHNNLD 108
           MDLTQP +D EENE EAL L                    E+EIRETSP  DPL      
Sbjct: 1   MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60

Query: 109 CEEAATPLPSSHVNEIAHLQSKRPQNRPLDSPVARTRSAIRRLPIEEVQSQSEEN 164
            EEA TPLPSSHVN   H QSKRP NRPLDSP   TRSA+R+LP+EEV+SQ EEN
Sbjct: 61  -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEEN 90

The following BLAST results are available for this feature:

BLAST of PI0013943 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013943 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BZI8	4.5e-31	63.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LMZ0	1.0e-22	77.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093830 PE=4 SV=1	[more]
A0A5A7UBP2	1.6e-20	57.39	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0...	[more]
A0A5A7SRN7	1.6e-20	57.39	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5A7UI65	4.7e-20	56.52	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11091G...	[more]

BLAST of PI0013943 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04585.1	9.3e-31	63.08	hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa]	[more]
KAA0032201.1	3.3e-20	57.39	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0051001.1	3.3e-20	57.39	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0053956.1	9.7e-20	56.52	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0041269.1	1.3e-19	57.39	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of PI0013943 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013943.1	PI0013943.1	mRNA