Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATAGTTCGAGACAGAGGAAGAGTAAGTTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCTATGAGTGTAGATCAATATGCAATGGATTTGGGGTTTACTACAGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCATCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACTCATCCTGCCTCTCCTCTATCAAATATGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCTAGAAAAATGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAAAATATCAAAGTCTCACTCTCGATGAGACAGTTTCAAAAATCTTCCCTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACCAAAAAATTTTTCGAGTTTATTCTAGTAGATACAAAGTCTGTAGAAATAACTCACGTACCCAACAAAAACGATCCTTCAAAAGTCGCTTATTCCAAACTAAAAAATTTCAAAGCAATCAATCCAACTCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTCTCAAAACCATTTGTACCTCAATCCTACTCTTACCAAGACTACATTAAAGCTTGGTTTAGAGTTATTTGGTTTTCTAGCAGGAACCATTCTTGGTTCATTTCCTTTTGCCAGAACGCCTACAAAATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTTACAGGCGACATCCTACCAACTCCCATTCAAGAATCCTATTTTTATTTCACAAGAACAATTCAAAAGAATTCTTTTCATAACTCAATGAGATTTTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACGGCATCCTATCCTCAATACAAAATGCTTGTTAAAAATCTCAAGATTAAATGGTGGGAGAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGACTATCTTCAAGACATCGATCAGAAAAAGAACACAGAATTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGTAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCTTTCATACAGGAAGATGAAGAATTGGCAAGTCCAGAGTACGATCTAAACGACCCGTTTCTCGACTCACAACCTATGTGA
mRNA sequence
ATGAGTATAGTTCGAGACAGAGGAAGAGTAAGTTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCTATGAGTGTAGATCAATATGCAATGGATTTGGGGTTTACTACAGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCATCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACTCATCCTGCCTCTCCTCTATCAAATATGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCTAGAAAAATGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAAAATATCAAAGTCTCACTCTCGATGAGACAGTTTCAAAAATCTTCCCTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACCAAAAAATTTTTCGAGTTTATTCTAGTAGATACAAAGTCTGTAGAAATAACTCACGTACCCAACAAAAACGATCCTTCAAAAGTCGCTTATTCCAAACTAAAAAATTTCAAAGCAATCAATCCAACTCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTCTCAAAACCATTTGTACCTCAATCCTACTCTTACCAAGACTACATTAAAGCTTGGTTTAGAGTTATTTGGTTTTCTAGCAGGAACCATTCTTGGTTCATTTCCTTTTGCCAGAACGCCTACAAAATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTTACAGGCGACATCCTACCAACTCCCATTCAAGAATCCTATTTTTATTTCACAAGAACAATTCAAAAGAATTCTTTTCATAACTCAATGAGATTTTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACGGCATCCTATCCTCAATACAAAATGCTTGTTAAAAATCTCAAGATTAAATGGTGGGAGAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGACTATCTTCAAGACATCGATCAGAAAAAGAACACAGAATTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGTAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCTTTCATACAGGAAGATGAAGAATTGGCAAGTCCAGAGTACGATCTAAACGACCCGTTTCTCGACTCACAACCTATGTGA
Coding sequence (CDS)
ATGAGTATAGTTCGAGACAGAGGAAGAGTAAGTTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCTATGAGTGTAGATCAATATGCAATGGATTTGGGGTTTACTACAGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCATCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACTCATCCTGCCTCTCCTCTATCAAATATGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCTAGAAAAATGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAAAATATCAAAGTCTCACTCTCGATGAGACAGTTTCAAAAATCTTCCCTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACCAAAAAATTTTTCGAGTTTATTCTAGTAGATACAAAGTCTGTAGAAATAACTCACGTACCCAACAAAAACGATCCTTCAAAAGTCGCTTATTCCAAACTAAAAAATTTCAAAGCAATCAATCCAACTCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTCTCAAAACCATTTGTACCTCAATCCTACTCTTACCAAGACTACATTAAAGCTTGGTTTAGAGTTATTTGGTTTTCTAGCAGGAACCATTCTTGGTTCATTTCCTTTTGCCAGAACGCCTACAAAATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTTACAGGCGACATCCTACCAACTCCCATTCAAGAATCCTATTTTTATTTCACAAGAACAATTCAAAAGAATTCTTTTCATAACTCAATGAGATTTTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACGGCATCCTATCCTCAATACAAAATGCTTGTTAAAAATCTCAAGATTAAATGGTGGGAGAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGACTATCTTCAAGACATCGATCAGAAAAAGAACACAGAATTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGTAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCTTTCATACAGGAAGATGAAGAATTGGCAAGTCCAGAGTACGATCTAAACGACCCGTTTCTCGACTCACAACCTATGTGA
Protein sequence
MSIVRDRGRVSSTSSKGSRLSSSPNPAPSPMSVDQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITHPASPLSNMESSTPPTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVVNASSSSKSASSFIQEDEELASPEYDLNDPFLDSQPM
Homology
BLAST of PI0013930 vs. ExPASy TrEMBL
Match:
A0A5A7SR64 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE=4 SV=1)
HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 191/420 (45.48%), Postives = 269/420 (64.05%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF K I D IEP++ ++ E
Sbjct: 61 DASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTK-TTIVDLTIEPEFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P IQ SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L IKWWEK+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLLSTVV------NASSSSKSASSFIQEDEELASPEY---DLNDPFLDSQP 435
A+T +F +++ VV N ++ + + + ++L Y D+NDPFLD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYVGLDINDPFLDTQP 418
BLAST of PI0013930 vs. ExPASy TrEMBL
Match:
A0A5D3DW87 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 PE=4 SV=1)
HSP 1 Score: 359.4 bits (921), Expect = 2.1e-95
Identity = 190/420 (45.24%), Postives = 269/420 (64.05%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF K + D IEP++ ++ E
Sbjct: 61 DASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P IQ SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L IKWWEK+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLLSTVV------NASSSSKSASSFIQEDEELASPEY---DLNDPFLDSQP 435
A+T +F +++ VV N ++ + + + ++L Y D+NDPFLD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYEGLDINDPFLDTQP 418
BLAST of PI0013930 vs. ExPASy TrEMBL
Match:
A0A5A7VIK9 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001410 PE=4 SV=1)
HSP 1 Score: 359.4 bits (921), Expect = 2.1e-95
Identity = 190/420 (45.24%), Postives = 268/420 (63.81%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF K + D IEPK+ ++ E
Sbjct: 61 AASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTKTTMV-DLTIEPKFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P +Q SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L+IKWWEK+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLLSTVV------NASSSSKSASSFIQEDEELASPEY---DLNDPFLDSQP 435
A+T +F +++ VV N + + + ++L Y D+NDPFLD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNNVDDLDYDPYEGLDINDPFLDTQP 418
BLAST of PI0013930 vs. ExPASy TrEMBL
Match:
A0A5A7SS94 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003480 PE=4 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 4.8e-95
Identity = 193/424 (45.52%), Postives = 267/424 (62.97%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF + D IEP++ ++ E
Sbjct: 61 DASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTNTTMV-DLTIEPEFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P IQ SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L+IKWWEK+N+ H + +K+WF N +LQD+ +++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTTQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLL-STVVNASSSSKSASSFIQEDEELASPE------------YDLNDPFL 435
A+T +F ++ + VVN S + + ED LAS D+NDPFL
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDD----LPEDASLASVNDVDDLDYDPYEGLDINDPFL 418
BLAST of PI0013930 vs. ExPASy TrEMBL
Match:
A0A5A7U3G5 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00490 PE=4 SV=1)
HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94
Identity = 195/439 (44.42%), Postives = 278/439 (63.33%), Query Frame = 0
Query: 12 STSSKGSRLSSSPNPAPSPMSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPS 71
+T SKG S+ + APS MS + YAMDL F V+R S+ + ++SS+ PP PS
Sbjct: 38 TTPSKGK--PSTQSSAPSLMSAENYAMDLQFEQVSRRHQGSAQRTLTIQSDSSSLPPIPS 97
Query: 72 ANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVA 131
L+RPSG T ASP S+ S+ P P++YSQ V K F PRP I YF K
Sbjct: 98 TALLRPSGPTTPNKRAASPTASSSRSAIPRNPSSYSQIVR-PKVFQPRPSINGYFTKTTM 157
Query: 132 IYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKN 191
+ D IEP++ ++ E ++IFP FNFLPEDL KT F+E+ILVD+KS EITHVP+KN
Sbjct: 158 V-DLTIEPEFDGPSVHEVCNQIFPHEFNFLPEDLTKTMTFYEYILVDSKSAEITHVPDKN 217
Query: 192 DPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNH 251
DPSK+ YSKL+ F+ + P++W QG+F + FS PF P SY+Y+DY KAW+ V W + NH
Sbjct: 218 DPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNH 277
Query: 252 SWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFC 311
SWF++FC+ AYK++FP WF WW FGL+ +I P +Q SY F ++I + + RF
Sbjct: 278 SWFMTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFA 337
Query: 312 LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDID 371
LYFQIPWIFCW+F +K L K+L+IKWWEK+N+ H + +K+WF N +LQD+
Sbjct: 338 LYFQIPWIFCWNFQLGPSENFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMT 397
Query: 372 QKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEEL 431
++++ FL K+ +++ LA A+T +F +++ VV N ++ + + + ++L
Sbjct: 398 RQEDEAFLLTKNAVMSTLAGASTQQEFNYVVNNVVVNRSDDNDDLPEDASPASVNDVDDL 457
Query: 432 ASPEY---DLNDPFLDSQP 435
Y D+NDPFLD+QP
Sbjct: 458 DYDPYEGLDINDPFLDTQP 472
BLAST of PI0013930 vs. NCBI nr
Match:
KAA0032923.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 360.1 bits (923), Expect = 2.6e-95
Identity = 191/420 (45.48%), Postives = 269/420 (64.05%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF K I D IEP++ ++ E
Sbjct: 61 DASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTK-TTIVDLTIEPEFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P IQ SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L IKWWEK+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLLSTVV------NASSSSKSASSFIQEDEELASPEY---DLNDPFLDSQP 435
A+T +F +++ VV N ++ + + + ++L Y D+NDPFLD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYVGLDINDPFLDTQP 418
BLAST of PI0013930 vs. NCBI nr
Match:
TYK28077.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 359.4 bits (921), Expect = 4.4e-95
Identity = 190/420 (45.24%), Postives = 269/420 (64.05%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF K + D IEP++ ++ E
Sbjct: 61 DASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P IQ SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L IKWWEK+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLLSTVV------NASSSSKSASSFIQEDEELASPEY---DLNDPFLDSQP 435
A+T +F +++ VV N ++ + + + ++L Y D+NDPFLD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYEGLDINDPFLDTQP 418
BLAST of PI0013930 vs. NCBI nr
Match:
KAA0068172.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 359.4 bits (921), Expect = 4.4e-95
Identity = 190/420 (45.24%), Postives = 268/420 (63.81%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF K + D IEPK+ ++ E
Sbjct: 61 AASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTKTTMV-DLTIEPKFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P +Q SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L+IKWWEK+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLLSTVV------NASSSSKSASSFIQEDEELASPEY---DLNDPFLDSQP 435
A+T +F +++ VV N + + + ++L Y D+NDPFLD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNNVDDLDYDPYEGLDINDPFLDTQP 418
BLAST of PI0013930 vs. NCBI nr
Match:
KAA0032916.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK28084.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 358.2 bits (918), Expect = 9.9e-95
Identity = 193/424 (45.52%), Postives = 267/424 (62.97%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF + D IEP++ ++ E
Sbjct: 61 DASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTNTTMV-DLTIEPEFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P IQ SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L+IKWWEK+N+ H + +K+WF N +LQD+ +++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTTQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLL-STVVNASSSSKSASSFIQEDEELASPE------------YDLNDPFL 435
A+T +F ++ + VVN S + + ED LAS D+NDPFL
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDD----LPEDASLASVNDVDDLDYDPYEGLDINDPFL 418
BLAST of PI0013930 vs. NCBI nr
Match:
KAA0063832.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 357.1 bits (915), Expect = 2.2e-94
Identity = 192/420 (45.71%), Postives = 269/420 (64.05%), Query Frame = 0
Query: 31 MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP 90
MS + YAMDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP
Sbjct: 1 MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60
Query: 91 -LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETV 150
S+ S+ P P++YSQ V K F PRP I YF K + D IEP++ ++ E
Sbjct: 61 AASSSRSAIPRNPSSYSQIVR-PKIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVC 120
Query: 151 SKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPT 210
S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180
Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWF 270
+W QG+F + FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWF 240
Query: 271 IQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
WW FGL+ +I P +Q SY F ++I + + RF LYFQIPWIFCW+F
Sbjct: 241 QNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300
Query: 331 QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALA 390
+K L K+L+IKWWEK+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360
Query: 391 QATTDADFQRLL-STVVNASSSSK------SASSFIQEDEELASP--EYDLNDPFLDSQP 435
A+T +F ++ + VVN S + S +S D+ P D+NDPFLD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNNADDFDYDPYEGLDINDPFLDTQP 418
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SR64 | 1.3e-95 | 45.48 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE... | [more] |
A0A5D3DW87 | 2.1e-95 | 45.24 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 P... | [more] |
A0A5A7VIK9 | 2.1e-95 | 45.24 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7SS94 | 4.8e-95 | 45.52 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5A7U3G5 | 1.1e-94 | 44.42 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00490 PE... | [more] |
Match Name | E-value | Identity | Description | |
KAA0032923.1 | 2.6e-95 | 45.48 | polyprotein [Cucumis melo var. makuwa] | [more] |
TYK28077.1 | 4.4e-95 | 45.24 | polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0068172.1 | 4.4e-95 | 45.24 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] | [more] |
KAA0032916.1 | 9.9e-95 | 45.52 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK28084.1 Retrotransp... | [more] |
KAA0063832.1 | 2.2e-94 | 45.71 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |