PI0013832 (gene) Melon (PI 482460) v1

Overview


Name	PI0013832
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DEAD-box ATP-dependent RNA helicase 51-like
Location	chr12: 1652593 .. 1655587 (+)
RNA-Seq Expression	PI0013832
Synteny	PI0013832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGATCATCTCCAGCATACCAAAAATTTTGTATTTAAGAATTTGAAGGTAGGATAGCCTGTTTATCATTTTCTCGGCATTATTTATGAAACTTGTTGGAAAATATTTTTATCCGTACCAAGTAAATTATGGATTCTTGAGAATTTGTTGCTAGCGATATGATGTTGTTTGCTGCCAACATGTGGTCTGCTCCTCAAGTGTTCAGTTTATTTCTTGTTTTTTTTCAGCTCTAGTGTTTTGGATAAAAAACTACTCAATTGATAATAGACTATATTATCAAATATCAATCAATTTGGTTTTTATCACCTCAAATGGATTTAGATTTCATTTCCTATTCTGTTTGCATTGTGCAACACATCAATCATGTTGGTAATTACTTGTATGTTATCGTTAATCTTATATAAATGTGCCGTGACATTTTTCTCTCTGAACTTCTCTTTTGCAGTGCCTCATATTGATGAAGCCGATAGGATATTGGAACTAATTTTGAAGAGGAAATGAAACAAATTATAAGCTCCTACCAAAGGTAGTTAACTTTTGTTGTTTTATGTCATCTAAAATATAATAATTGGGATTTTTCGAGACTTTCTTATCAATGAAATTTTATGTTTCCTATATTAAAAAGACAATTATTATAATAATAAAAGTTGCCGCATCATCTGGGATGCCTTAGCAAATGGGTTAATGGTTGTTTGGGGTGGAGGTGCGTTATTTTTTTTTATGGTGTGTTCAATATTTTCCTCATGCAGTACTGCAATCTGATTGTATTGCAATTTGCAGAATAGGCAGACGGCTTGTTCTCAGCAACCCAAACACAAAGGTTTGTGTATTGCATTCAATTTTTATACTTTTCTCTCTCCTTATGGATTCTTCTCTTCTACCATTGTCATTTGGATTGATTATGTTTCTCTCCTCACTGATCATCCAAAAAAACAAAAATACAGGTTGAAATCTTGTCCGCTTGTCTTTTCAGTCAACTCCTATGTATATCGATGATGATGATGGGAGAACAAAGGTATCCTGATCTGCTGATATATATATGTTTATTTATATTAGCCCTTTCCTTTGATTTGTTGTTTGACATGTTGGTTATTGTAGGTCACCAATGAAGGGTTGCAACAAGGTTATTGTGTTGTTCCCAGTGCTAAAAGATTCATTGTTCTTTATTCCTTCTTGAAGAGAAGTTTGTCAAGAAAGTTATGGTCTTCTTCTCATCTTGTAACTCTGTTACATTTCACGCGGACCTTCTTAGACACATTAAGATTGATTGCATGGATATTCATGGAAAGCAAAAACAGCAGAAGAGAACTTCTACCTTCTTTGCCTTCAATAAGGCTGAGACAGGGATCCTTCTATGTACTGATGTTGCTGCAGCGTGGACTTGACATCCCCGCTGTTGTAAGTTACACTCTGTTTTAGCCATGTCAACGCATTTCCCCATAGAAACAATTAAAGTTGCATTGCGTTGGTGGTCATATTTTCTATTAAAGCCATTTAACTATGTTCATTTCGCGTGTCTCAGGATTGGATTGTGCAGTACGATCCTCCAGATGAACCTAAGGTGTTCGTTGCTACTCAATTTCGTTCATGACCTATATAGTATCCTGGAATCCCTATACTAATTGAGTTTACTGTTGTTTGAAATTATTGGTTTTAGGAATATATTCACAGAGTTGGTCGAACAGCTCGAGGTGAAGGAAGCAAAGGAAATGCACTACTATTCTTGATTCCTGAAGAGCTTCAGTTTCTTCGCTATCTAAAGGTCTAATATTTTCCCTTTAAACTTAAATAAATTTGAATGCTGTTGTTGTCAGACTGTCATTTATCTTTTTCTCAGTTAAGTAGTATTTGAAGAAGAGTAAACAAACGAAACATCAAAAGTCCATAAGCATATATATTTTAAACTTCTGTTCTTCGCTGAACTTTTGCATGATTGGGAATAGTTTTCACTTAGTGTCTTCCCTTTTTAATATATTGTGTGTGTGGGTCATATTCTATTGTTAGGCAGCAAAAGTTCCTGTCAAAGAGTACGAGTTCAGTGATAAAAAACTGGCCAACGTGCAGTCTCACCTGGTAACTCATTCCCCTTTTGTTTGTGTTCTCAGCAGTATCACTCAAGCACGGGCACTTAAATTTGAAATATTGAATGATGCAGGAGAAGGTGGTTGGCAGTATTATCATTTGAACAAGGCAGCTAAAGATGCTTACAGAACCTATTTATTAGCTTACAATTCACACTCTATGAAAGATATTTTCATGTCCACCGCCTTGATCTGCAGGTACTGATTATCCATTGTCTCTAAGATCTTAGTAAGAAGCTTCGCTGACTAAAATTTTGGTTGGATACACGTTTTTAGTCTAAATGAGTTTATTGTCACATGTCAAAGTTCTTTGTGCTTGAATATTTGTATGCTCGATTGGGGAAGTTTTCTATCTCTACACTTACAGTTATATGTGAACAGGCTATTGCTGCTTCTTTTGCTTTTCAAATCCTCCAAAGGTCAACCTTATATTGACAGCAGTGCCTCAAAATTGAGGAAGAAAACGCGTAAAGTAGAAGGGAGCAGGAATGGATTCAATCAGAGCAATCCTTATGAGGAAGAATGTGGAGGATGAAAAACAATTTGTAAGATACTAGCTTATAGTTCTATCTAACGGGATGTTCCAAATCTATGACCCCATAGTCGAGATGAGACATACTATATAGTTGAGCTATATTCATATTAGTCTTAACAATTCATTTATGCGCTGATATTCTTTAAATAGTTTGGTACCATATGCAATGTTGTAACCTAAGTTTTGTGTAGCATAGGGAAAATATGAACGAGGCAATTTGAGAGTAATTTATTCATAGATTAGGTTACCGAGTTTTATTTTGGAGAGAAAATGTTTGTGATTGGATATACATTATTACCATATGTTTATTTGGAGAAGTGTATACTTAGCACATAATTTTTTTTTATGATTCATTCTTAATTTTAACTTTGTTATTCT

mRNA sequence

TCTTGATCATCTCCAGCATACCAAAAATTTTGTATTTAAGAATTTGAAGTGCCTCATATTGATGAAGCCGATAGGATATTGGAACTAATTTTGAAGAGGAAATGAAACAAATTATAAGCTCCTACCAAAGAATAGGCAGACGGCTTGTTCTCAGCAACCCAAACACAAAGGTTGAAATCTTGTCCGCTTGTCTTTTCAGTCAACTCCTATGTATATCGATGATGATGATGGGAGAACAAAGGTCACCAATGAAGGGTTGCAACAAGGTTATTGTGTTGTTCCCAGTGCTAAAAGATTCATTGTTCTTTATTCCTTCTTGAAGAGAAGTTTGTCAAGAAAGTTATGGTCTTCTTCTCATCTTGTAACTCTGTTACATTTCACGCGGACCTTCTTAGACACATTAAGATTGATTGCATGGATATTCATGGAAAGCAAAAACAGCAGAAGAGAACTTCTACCTTCTTTGCCTTCAATAAGGCTGAGACAGGGATCCTTCTATGTACTGATGTTGCTGCAGCGTGGACTTGACATCCCCGCTGTTGATTGGATTGTGCAGTACGATCCTCCAGATGAACCTAAGGAATATATTCACAGAGTTGGTCGAACAGCTCGAGGTGAAGGAAGCAAAGGAAATGCACTACTATTCTTGATTCCTGAAGAGCTTCAGTTTCTTCGCTATCTAAAGGCAGCAAAAGTTCCTGTCAAAGAGTACGAGTTCAGTGATAAAAAACTGGCCAACGTGCAGTCTCACCTGGAGAAGGTGGTTGGCAGTATTATCATTTGAACAAGGCAGCTAAAGATGCTTACAGAACCTATTTATTAGCTTACAATTCACACTCTATGAAAGATATTTTCATGTCCACCGCCTTGATCTGCAGGCTATTGCTGCTTCTTTTGCTTTTCAAATCCTCCAAAGGTCAACCTTATATTGACAGCAGTGCCTCAAAATTGAGGAAGAAAACGCGTAAAGTAGAAGGGAGCAGGAATGGATTCAATCAGAGCAATCCTTATGAGGAAGAATGTGGAGGATGAAAAACAATTTGTAAGATACTAGCTTATAGTTCTATCTAACGGGATGTTCCAAATCTATGACCCCATAGTCGAGATGAGACATACTATATAGTTGAGCTATATTCATATTAGTCTTAACAATTCATTTATGCGCTGATATTCTTTAAATAGTTTGGTACCATATGCAATGTTGTAACCTAAGTTTTGTGTAGCATAGGGAAAATATGAACGAGGCAATTTGAGAGTAATTTATTCATAGATTAGGTTACCGAGTTTTATTTTGGAGAGAAAATGTTTGTGATTGGATATACATTATTACCATATGTTTATTTGGAGAAGTGTATACTTAGCACATAATTTTTTTTTATGATTCATTCTTAATTTTAACTTTGTTATTCT

Coding sequence (CDS)

ATGTATATCGATGATGATGATGGGAGAACAAAGGTCACCAATGAAGGGTTGCAACAAGGTTATTGTGTTGTTCCCAGTGCTAAAAGATTCATTGTTCTTTATTCCTTCTTGAAGAGAAGTTTGTCAAGAAAGTTATGGTCTTCTTCTCATCTTGTAACTCTGTTACATTTCACGCGGACCTTCTTAGACACATTAAGATTGATTGCATGGATATTCATGGAAAGCAAAAACAGCAGAAGAGAACTTCTACCTTCTTTGCCTTCAATAAGGCTGAGACAGGGATCCTTCTATGTACTGATGTTGCTGCAGCGTGGACTTGACATCCCCGCTGTTGATTGGATTGTGCAGTACGATCCTCCAGATGAACCTAAGGAATATATTCACAGAGTTGGTCGAACAGCTCGAGGTGAAGGAAGCAAAGGAAATGCACTACTATTCTTGATTCCTGAAGAGCTTCAGTTTCTTCGCTATCTAAAGGCAGCAAAAGTTCCTGTCAAAGAGTACGAGTTCAGTGATAAAAAACTGGCCAACGTGCAGTCTCACCTGGAGAAGGTGGTTGGCAGTATTATCATTTGA

Protein sequence

MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQSHLEKVVGSIII

Homology

[Close]

BLAST of PI0013832 vs. ExPASy Swiss-Prot
Match: Q9LIH9 (DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana OX=3702 GN=RH51 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.9e-49
Identity = 100/186 (53.76%), Postives = 129/186 (69.35%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +++D DDGR KVTNEGL+QGYCVVPS +R I+L SFLK++L++K+         + F   
Sbjct: 293 VHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTE 352

Query: 61  FLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPP 120
            +    +         +  R        ++ ++G      +  RGLDIP+VDWI+QYDPP
Sbjct: 353 IMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPP 412

Query: 121 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 180
           D+P EYIHRVGRTARGEG+KG ALL LIPEELQF+RYLKAAKVPVKE EF++K+L+NVQS
Sbjct: 413 DKPTEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKRLSNVQS 472

Query: 181 HLEKVV 187
            LEK V
Sbjct: 473 ALEKCV 478

[Close]

BLAST of PI0013832 vs. ExPASy Swiss-Prot
Match: Q54S03 (Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum OX=44689 GN=ddx18 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.2e-44
Identity = 91/186 (48.92%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +Y+  DD R   T EGL+QGY V PS +RF++LY+FLK++LS+K+         + +T  
Sbjct: 324 VYVGVDDEREISTVEGLEQGYVVCPSERRFLLLYTFLKKNLSKKIIVFLSSCNAVKYTAE 383

Query: 61  FLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPP 120
            L+ + +        +  ++        +   +G      +  RGLDIP+VDWI+QYDPP
Sbjct: 384 LLNYIDIPVLELHGRQKQQKRTNTFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPP 443

Query: 121 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 180
           D+PKEYIHRVGRTARG G KG ALLFL+P+EL FL+YLK AKVP+ EYEF   K+ANVQ 
Sbjct: 444 DDPKEYIHRVGRTARGVGKKGRALLFLLPKELGFLKYLKLAKVPLNEYEFPKSKIANVQD 503

Query: 181 HLEKVV 187
            LEKVV
Sbjct: 504 QLEKVV 509

[Close]

BLAST of PI0013832 vs. ExPASy Swiss-Prot
Match: Q84T03 (DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0802700 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.8e-43
Identity = 89/187 (47.59%), Postives = 121/187 (64.71%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +Y+  DD  T  T EGLQQGYCV+ SA+RF+VLY+FLK+  ++K+         + F   
Sbjct: 307 VYVGVDDAETNATVEGLQQGYCVIDSARRFLVLYAFLKKKQNKKVMVFFSSCNSVKFHAE 366

Query: 61  FLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPP 120
            L+ L++        +  ++         +  +G      +  RGLDIP VD+IVQYDPP
Sbjct: 367 LLNFLQIECSDIHGKQKQQKRTTTFFNFCKAEKGILLCTNVAARGLDIPDVDFIVQYDPP 426

Query: 121 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 180
           DEPK+YIHRVGRTARGE  KG ALLFL+P+EL+FL YLKAAK+ + E  F++ K+ N+QS
Sbjct: 427 DEPKDYIHRVGRTARGEKGKGEALLFLLPQELKFLIYLKAAKISLTELVFNENKVPNLQS 486

Query: 181 HLEKVVG 188
           HLE +VG
Sbjct: 487 HLENIVG 493

[Close]

BLAST of PI0013832 vs. ExPASy Swiss-Prot
Match: Q9SB89 (DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana OX=3702 GN=RH27 PE=2 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.0e-42
Identity = 91/189 (48.15%), Postives = 123/189 (65.08%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +YID D+GR +VTNEGL+QGYCVVPSA R + L +FLKR   +K        +    T+ 
Sbjct: 358 VYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKK--KIMVFFSTCKSTKF 417

Query: 61  FLDTLRLIAWIFMESK---NSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQY 120
             +  R I +  +E +   +  +     L  I+   G      +  RGLD P VDWIVQY
Sbjct: 418 HAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQY 477

Query: 121 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 180
           DPPD P +YIHRVGRTARGEG+KG ALL L P+EL+F++YLKAAK+PV+E+EF +KKL +
Sbjct: 478 DPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQYLKAAKIPVEEHEFEEKKLLD 537

Query: 181 VQSHLEKVV 187
           V+  +E ++
Sbjct: 538 VKPFVENLI 544

[Close]

BLAST of PI0013832 vs. ExPASy Swiss-Prot
Match: Q6C7D2 (ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=HAS1 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-40
Identity = 87/188 (46.28%), Postives = 119/188 (63.30%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +Y++ D+     T EGL+QGY V  S KRF++L+SFLKR+  +K+         + F   
Sbjct: 336 LYLNVDEHNVSSTAEGLEQGYVVCDSDKRFLLLFSFLKRNAGKKIIVFLSSCNSVKFYGE 395

Query: 61  FLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPP 120
            L+ + L        +  ++        I  +QG      +  RGLDIP VDWI+Q+DPP
Sbjct: 396 LLNYIDLPVLDLHGKQKQQKRTNTFFEFINAKQGVLICTDVAARGLDIPKVDWIIQFDPP 455

Query: 121 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 180
           D+P++YIHRVGRTARG  S G +++FL P EL FLRYLKAAKVP+ EYEF +KK+ANVQS
Sbjct: 456 DDPRDYIHRVGRTARGSAS-GKSIMFLTPSELGFLRYLKAAKVPLNEYEFPNKKIANVQS 515

Query: 181 HLEKVVGS 189
            LEK++ S
Sbjct: 516 QLEKLISS 522

[Close]

BLAST of PI0013832 vs. ExPASy TrEMBL
Match: A0A5D3BIX9 (DEAD-box ATP-dependent RNA helicase 51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002500 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 132/191 (69.11%), Postives = 147/191 (76.96%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKL---WSSSHLVTLLHF 60
           +YID DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLS+K+   +SS + VT   F
Sbjct: 283 VYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSKKVMVFFSSCNSVT---F 342

Query: 61  TRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQY 120
               L  +++        +  ++         +  +G      +  RGLDIPAVDWIVQY
Sbjct: 343 HADLLRHIKIDCMDIHGKQKQQKRTSTFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQY 402

Query: 121 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 180
           DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN
Sbjct: 403 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 462

Query: 181 VQSHLEKVVGS 189
           VQSHLEK+VGS
Sbjct: 463 VQSHLEKLVGS 470

[Close]

BLAST of PI0013832 vs. ExPASy TrEMBL
Match: A0A1S3CRK6 (DEAD-box ATP-dependent RNA helicase 51-like OS=Cucumis melo OX=3656 GN=LOC103503911 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 132/191 (69.11%), Postives = 147/191 (76.96%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKL---WSSSHLVTLLHF 60
           +YID DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLS+K+   +SS + VT   F
Sbjct: 334 VYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSKKVMVFFSSCNSVT---F 393

Query: 61  TRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQY 120
               L  +++        +  ++         +  +G      +  RGLDIPAVDWIVQY
Sbjct: 394 HADLLRHIKIDCMDIHGKQKQQKRTSTFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQY 453

Query: 121 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 180
           DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN
Sbjct: 454 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 513

Query: 181 VQSHLEKVVGS 189
           VQSHLEK+VGS
Sbjct: 514 VQSHLEKLVGS 521

[Close]

BLAST of PI0013832 vs. ExPASy TrEMBL
Match: A0A0A0LT53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042950 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.6e-61
Identity = 131/191 (68.59%), Postives = 147/191 (76.96%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKL---WSSSHLVTLLHF 60
           +YID DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLS+K+   +SS + VT   F
Sbjct: 326 VYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSKKVMVFFSSCNSVT---F 385

Query: 61  TRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQY 120
               L  +++        +  ++         +  +G      +  RGLDIPAVDWIVQY
Sbjct: 386 HADLLRHIKIDCMDIHGKQKQQKRTSTFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQY 445

Query: 121 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 180
           DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDK+LAN
Sbjct: 446 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKRLAN 505

Query: 181 VQSHLEKVVGS 189
           VQSHLEK+VGS
Sbjct: 506 VQSHLEKLVGS 513

[Close]

BLAST of PI0013832 vs. ExPASy TrEMBL
Match: A0A5D3BGT0 (DEAD-box ATP-dependent RNA helicase 51 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001750 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 9.8e-61
Identity = 125/188 (66.49%), Postives = 143/188 (76.06%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +YID DDGRTKVTNEGLQQGYCVVPS+KRFI+LYSFLK++LS+K+         + F   
Sbjct: 334 IYIDVDDGRTKVTNEGLQQGYCVVPSSKRFILLYSFLKKNLSKKVMVFFSSCNSVKFHAD 393

Query: 61  FLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPP 120
            L  +++        +  ++        I+ + G      +  RGLDIPAVDWIVQYDPP
Sbjct: 394 LLRYIKVECMDIHGKQKQQKRTSTFFSFIKAQTGILLCTDVAARGLDIPAVDWIVQYDPP 453

Query: 121 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 180
           DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS
Sbjct: 454 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 513

Query: 181 HLEKVVGS 189
           HLEK+VGS
Sbjct: 514 HLEKLVGS 521

[Close]

BLAST of PI0013832 vs. ExPASy TrEMBL
Match: A0A1S3C1Z8 (DEAD-box ATP-dependent RNA helicase 51 OS=Cucumis melo OX=3656 GN=LOC103495709 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 9.8e-61
Identity = 125/188 (66.49%), Postives = 143/188 (76.06%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +YID DDGRTKVTNEGLQQGYCVVPS+KRFI+LYSFLK++LS+K+         + F   
Sbjct: 334 IYIDVDDGRTKVTNEGLQQGYCVVPSSKRFILLYSFLKKNLSKKVMVFFSSCNSVKFHAD 393

Query: 61  FLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPP 120
            L  +++        +  ++        I+ + G      +  RGLDIPAVDWIVQYDPP
Sbjct: 394 LLRYIKVECMDIHGKQKQQKRTSTFFSFIKAQTGILLCTDVAARGLDIPAVDWIVQYDPP 453

Query: 121 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 180
           DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS
Sbjct: 454 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 513

Query: 181 HLEKVVGS 189
           HLEK+VGS
Sbjct: 514 HLEKLVGS 521

[Close]

BLAST of PI0013832 vs. NCBI nr
Match: XP_038895643.1 (DEAD-box ATP-dependent RNA helicase 27-like isoform X2 [Benincasa hispida])

HSP 1 Score: 246.5 bits (628), Expect = 1.8e-61
Identity = 135/194 (69.59%), Postives = 150/194 (77.32%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKL---WSSSHLVTLLHF 60
           +YID DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLS+K+   +SS + VT    
Sbjct: 271 IYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSKKVMVFFSSCNSVTF--- 330

Query: 61  TRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLM---LLQRGLDIPAVDWI 120
                D LR I    M+    +++   +       +    +L+   +  RGLDIPAVDWI
Sbjct: 331 ---HADLLRHIKIDCMDIHGKQKQQKRTSTFFAFNKAETGILLCTDVAARGLDIPAVDWI 390

Query: 121 VQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKK 180
           VQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKK
Sbjct: 391 VQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKK 450

Query: 181 LANVQSHLEKVVGS 189
           LANVQSHLEK+VGS
Sbjct: 451 LANVQSHLEKLVGS 458

[Close]

BLAST of PI0013832 vs. NCBI nr
Match: XP_038895642.1 (DEAD-box ATP-dependent RNA helicase 51-like isoform X1 [Benincasa hispida])

HSP 1 Score: 246.5 bits (628), Expect = 1.8e-61
Identity = 135/194 (69.59%), Postives = 150/194 (77.32%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKL---WSSSHLVTLLHF 60
           +YID DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLS+K+   +SS + VT    
Sbjct: 333 IYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSKKVMVFFSSCNSVTF--- 392

Query: 61  TRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLM---LLQRGLDIPAVDWI 120
                D LR I    M+    +++   +       +    +L+   +  RGLDIPAVDWI
Sbjct: 393 ---HADLLRHIKIDCMDIHGKQKQQKRTSTFFAFNKAETGILLCTDVAARGLDIPAVDWI 452

Query: 121 VQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKK 180
           VQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKK
Sbjct: 453 VQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKK 512

Query: 181 LANVQSHLEKVVGS 189
           LANVQSHLEK+VGS
Sbjct: 513 LANVQSHLEKLVGS 520

[Close]

BLAST of PI0013832 vs. NCBI nr
Match: TYJ99046.1 (DEAD-box ATP-dependent RNA helicase 51-like [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 132/191 (69.11%), Postives = 147/191 (76.96%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKL---WSSSHLVTLLHF 60
           +YID DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLS+K+   +SS + VT   F
Sbjct: 283 VYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSKKVMVFFSSCNSVT---F 342

Query: 61  TRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQY 120
               L  +++        +  ++         +  +G      +  RGLDIPAVDWIVQY
Sbjct: 343 HADLLRHIKIDCMDIHGKQKQQKRTSTFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQY 402

Query: 121 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 180
           DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN
Sbjct: 403 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 462

Query: 181 VQSHLEKVVGS 189
           VQSHLEK+VGS
Sbjct: 463 VQSHLEKLVGS 470

[Close]

BLAST of PI0013832 vs. NCBI nr
Match: XP_008466557.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 132/191 (69.11%), Postives = 147/191 (76.96%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKL---WSSSHLVTLLHF 60
           +YID DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLS+K+   +SS + VT   F
Sbjct: 334 VYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSKKVMVFFSSCNSVT---F 393

Query: 61  TRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQY 120
               L  +++        +  ++         +  +G      +  RGLDIPAVDWIVQY
Sbjct: 394 HADLLRHIKIDCMDIHGKQKQQKRTSTFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQY 453

Query: 121 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 180
           DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN
Sbjct: 454 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 513

Query: 181 VQSHLEKVVGS 189
           VQSHLEK+VGS
Sbjct: 514 VQSHLEKLVGS 521

[Close]

BLAST of PI0013832 vs. NCBI nr
Match: XP_004137513.1 (DEAD-box ATP-dependent RNA helicase 51 [Cucumis sativus] >KGN64189.1 hypothetical protein Csa_014355 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 5.4e-61
Identity = 131/191 (68.59%), Postives = 147/191 (76.96%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKL---WSSSHLVTLLHF 60
           +YID DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLS+K+   +SS + VT   F
Sbjct: 326 VYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSKKVMVFFSSCNSVT---F 385

Query: 61  TRTFLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQY 120
               L  +++        +  ++         +  +G      +  RGLDIPAVDWIVQY
Sbjct: 386 HADLLRHIKIDCMDIHGKQKQQKRTSTFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQY 445

Query: 121 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 180
           DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDK+LAN
Sbjct: 446 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKRLAN 505

Query: 181 VQSHLEKVVGS 189
           VQSHLEK+VGS
Sbjct: 506 VQSHLEKLVGS 513

[Close]

BLAST of PI0013832 vs. TAIR 10
Match: AT3G18600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-50
Identity = 100/186 (53.76%), Postives = 129/186 (69.35%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +++D DDGR KVTNEGL+QGYCVVPS +R I+L SFLK++L++K+         + F   
Sbjct: 293 VHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTE 352

Query: 61  FLDTLRLIAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPP 120
            +    +         +  R        ++ ++G      +  RGLDIP+VDWI+QYDPP
Sbjct: 353 IMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPP 412

Query: 121 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANVQS 180
           D+P EYIHRVGRTARGEG+KG ALL LIPEELQF+RYLKAAKVPVKE EF++K+L+NVQS
Sbjct: 413 DKPTEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKRLSNVQS 472

Query: 181 HLEKVV 187
            LEK V
Sbjct: 473 ALEKCV 478

[Close]

BLAST of PI0013832 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 91/189 (48.15%), Postives = 123/189 (65.08%), Query Frame = 0


Query: 1   MYIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRT 60
           +YID D+GR +VTNEGL+QGYCVVPSA R + L +FLKR   +K        +    T+ 
Sbjct: 358 VYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKK--KIMVFFSTCKSTKF 417

Query: 61  FLDTLRLIAWIFMESK---NSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQY 120
             +  R I +  +E +   +  +     L  I+   G      +  RGLD P VDWIVQY
Sbjct: 418 HAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQY 477

Query: 121 DPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLAN 180
           DPPD P +YIHRVGRTARGEG+KG ALL L P+EL+F++YLKAAK+PV+E+EF +KKL +
Sbjct: 478 DPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQYLKAAKIPVEEHEFEEKKLLD 537

Query: 181 VQSHLEKVV 187
           V+  +E ++
Sbjct: 538 VKPFVENLI 544

[Close]

BLAST of PI0013832 vs. TAIR 10
Match: AT5G54910.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 60/179 (33.52%), Postives = 90/179 (50.28%), Query Frame = 0


Query: 2   YIDDDDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSLSRKLWSSSHLVTLLHFTRTF 61
           YI         T   L Q   +VP  K+  +L+SF+K  L+ ++         + F    
Sbjct: 276 YISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEA 335

Query: 62  LDTLRL-IAWIFMESKNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDI-PAVDWIVQYDP 121
            + LR  I    +  K S+ + +        RQ   +   +L RGLD   AVDW+VQ D 
Sbjct: 336 FNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQSVLFCTDVLARGLDFDKAVDWVVQVDC 395

Query: 122 PDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSDKKLANV 179
           P++   YIHRVGRTAR   ++G +LLFL P E + +  L+ AKVP+K  + +++KL  V
Sbjct: 396 PEDVASYIHRVGRTARFY-TQGKSLLFLTPSEEKMIEKLQEAKVPIKLIKANNQKLQEV 453

[Close]

BLAST of PI0013832 vs. TAIR 10
Match: AT1G71370.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-15
Identity = 41/112 (36.61%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 62  LDTLRLIAWIFMESKNSRRELLPSLPSI-RLRQGSFYVLMLLQRGLDIPAVDWIVQYDPP 121
           + TL+ I++     K  ++    +L S      G      +  RGLDIP +D++VQYDPP
Sbjct: 288 IPTLKSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPP 347

Query: 122 DEPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSD 173
            +P  +IHRVGRTAR E  +G A++FL+P+E  ++ +++  +VP++E + S+
Sbjct: 348 QDPDVFIHRVGRTARME-RQGRAIVFLMPKETDYVEFMRIRRVPLQERKCSE 398

[Close]

BLAST of PI0013832 vs. TAIR 10
Match: AT5G05450.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 37/97 (38.14%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 76  KNSRRELLPSLPSIRLRQGSFYVLMLLQRGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR 135
           +N+R + L S    +   G+     +  RGLDIP +D++VQYDPP +P  + HR GRTAR
Sbjct: 314 QNARDKALASF--TKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTAR 373

Query: 136 GEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYEFSD 173
             G +G A++FL+P+E  ++ +++  +VP++E + S+
Sbjct: 374 -LGRQGRAIVFLLPKEEAYVEFMRIRRVPLEERKCSE 407

The following BLAST results are available for this feature:

BLAST of PI0013832 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIH9	2.9e-49	53.76	DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana OX=3702 GN=RH51 P...	[more]
Q54S03	6.2e-44	48.92	Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum OX=44689 G...	[more]
Q84T03	6.8e-43	47.59	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9SB89	2.0e-42	48.15	DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana OX=3702 GN=RH27 P...	[more]
Q6C7D2	1.9e-40	46.28	ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)...	[more]

BLAST of PI0013832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIX9	1.2e-61	69.11	DEAD-box ATP-dependent RNA helicase 51-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CRK6	1.2e-61	69.11	DEAD-box ATP-dependent RNA helicase 51-like OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A0A0LT53	2.6e-61	68.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042950 PE=3 SV=1	[more]
A0A5D3BGT0	9.8e-61	66.49	DEAD-box ATP-dependent RNA helicase 51 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C1Z8	9.8e-61	66.49	DEAD-box ATP-dependent RNA helicase 51 OS=Cucumis melo OX=3656 GN=LOC103495709 P...	[more]

BLAST of PI0013832 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895643.1	1.8e-61	69.59	DEAD-box ATP-dependent RNA helicase 27-like isoform X2 [Benincasa hispida]	[more]
XP_038895642.1	1.8e-61	69.59	DEAD-box ATP-dependent RNA helicase 51-like isoform X1 [Benincasa hispida]	[more]
TYJ99046.1	2.4e-61	69.11	DEAD-box ATP-dependent RNA helicase 51-like [Cucumis melo var. makuwa]	[more]
XP_008466557.1	2.4e-61	69.11	PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis melo]	[more]
XP_004137513.1	5.4e-61	68.59	DEAD-box ATP-dependent RNA helicase 51 [Cucumis sativus] >KGN64189.1 hypothetica...	[more]

BLAST of PI0013832 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18600.1	2.0e-50	53.76	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G65900.1	1.4e-43	48.15	DEA(D/H)-box RNA helicase family protein	[more]
AT5G54910.1	1.1e-16	33.52	DEA(D/H)-box RNA helicase family protein	[more]
AT1G71370.1	1.6e-15	36.61	DEA(D/H)-box RNA helicase family protein	[more]
AT5G05450.1	1.1e-14	38.14	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 31..137 e-value: 0.0072 score: 24.5
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 101..136 e-value: 4.4E-10 score: 39.9
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 16..186 score: 11.972873
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 14..189 e-value: 7.7E-22 score: 79.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 68..184
None	No IPR available	PANTHER	PTHR24031:SF630	DEAD-BOX ATP-DEPENDENT RNA HELICASE 51	coord: 2..188
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 2..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013832.1	PI0013832.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding