PI0013798 (gene) Melon (PI 482460) v1

Overview


Name	PI0013798
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Rab5-interacting
Location	chr11: 6694929 .. 6697980 (-)
RNA-Seq Expression	PI0013798
Synteny	PI0013798

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGAGACGACGATCCATTTTTGCTTTGCAGTGATTTGACCGCAAATGAATCCTTCAAATCCAAGTTTCTTCCTCGTTGATCCAACCGTTTTTCTCAATCTTCTTCTCTGAAATACAGTGTTTCTATTCCGACTGTAGCATTTTATCTGCACTTTTTTCCGGAATCTAGATCTAAGCTTACTGTAGATTCTTTGGTTGTTTCTGTTCGATTTTCCCGAAGAGTGATTGATTGAATTATCCGGTATGAAAGAAGCAAAACCGGTTAAGTTCAATCTTCATCAGCATCAAGATCATCAGAATGGTCATTTGGCTCCATTCAAGCTCGCTAAATTATTCGATCCAGAAGCCTCCTGGGACAAGGTACTTGATACTTTAGATCTTGGATCCAAATAGAATTGGTTTCTTATTGTCTCTTACATCTTTACTGTTTCTGCTTATGTTCTCTGTTGTATTTAGGAGGAATTTGGATTTAAGTGTTGTAATGTTGCAATTGAAGTAGAGGTTTTAATTTTGAAACGCCATATTCATTAAACTCTCGATTTAGAAAGTAAACTGAAAACTGTTACTATGACTTTATCATCTTCCCAATTGGTGTATCTACTTGCATTATTGAATATTGTTCTTAGTTTCTGTTTAACAAATTGTCAATAGGACCAACTGGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATGTGAGTTGCGCAATCCAACTTTCTGAATACTTGATTACTATGAAAGCATACATGCGTTATCTTTATGCAACTCATAGTTAGAAGATAAGATAATTTGATGTTGCAGATGAAGTATCGGTTATTTCTAAATACAAATATGTTCCACATTGATGTGATTTTATTTCATGGAGTTGTACCTTCCTTTAAGTGTTTTTCTTCCTTATGAATCCATGGAATGTAATGTCTATAATGTTTTGCTGTGGTCGTTATAGTACTTTTTTTACAAGCAGTGATGCTGATTTAGTAATAGGGATTTACTCTTGTTTTAATAAAATAAAGGGACAGTTGCAAATATATCAATTAGGCCTAAAGTATCAACAAAGATGGTACAACATAAAATAATTTGCAAATTTTGCAAAACTTAGGTCAATTCTCGAAGTTTATTGATGATAGACCATATCACTGGTAGGAGAGGAGTCTGTTACTAATAGGAGTAAAAATGTTGTTATGCACTAAATTATTATTCCTAAAAGTGCTACACAACGTAATTACCCTAAAATAAATTTATTTTCAAAACTAGTCTGAATTCTATCATTTACCATTTTTATCTTAAAAAAGTTTCCATTTTTGTACATAAATATAAATGATGAGAAAACATTGGATTTTATTTTAATTAGAAAGAAATCATAGTTGGATTGATTTTGATAGCTAAAGTAAATGAAAAACGTAAGGGCATAAGAGTTTTTTTTTTTCCACACACAGTCATGTACAATTCTGTTATTATTACGATAATTCTTAACCATGTGAGTATTCTTTCACAAGGTTGTTACGTTGGTTCTTGATTATGCTAACATGTCAATTGTCCTTTCTTAATTTTCTCCCTCTTCTCTCTCTTAGTAATTAATTTTGAATCATAGGAGTATTCTTTCAGAAATCTGGTGTTAGCTTTGGATTATGCTGCGCATCCAATAATACTTTCTTAATTTTGTATGTATATACAAGCTGTCTTACTGATGCTGGTTTCCATTTTCAGTTTCTTGGCGATATCAACAAGCGTTGTATATGGATACTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTCCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGGTACTTCAACATCTTTTTGTTCTTCTTTAGGTTTATTAAGTAATACAGTGCATAATTAATCGAACACTTCTTCAGGAAGGCCTTGTTTTGCTAACTGCTAAGATCAGTCTACTGGCTCAGACAGCTGACTTCATTCTCTTCTTGATTTTTCAGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGATTGGCAAAGAATGATTTGACATCCTGAAAATTACTTGGTGAAGTTCCAACAATGAACTTGGTTATACTTGATGCCCTGCTTATTTACAATTGCTTCTAATTGGTGGCACGAATTTTTTTTAACATTCATCATGTGAACAAATTGATTTAGAAGAGTAGGAAAACTTTAGCCTCTGATATATGGTGATAGATTGATTTTCGATCTCAAATTCATTGTTGACATTCTCCAAAGGCCACATAGAGATGGGCTATGGATGTAATCCTTGTTAAAATTATCACCTTGTATGTCATCAATTAATAGTTAGTCAGGCACCAATAACGTTGTGTACATTTGATGATCTTAAGTCATGGTTTCTTTTCCCTGCACCATCCTTAGAGAAACCACCAAGCAGTTTTATGGCTTGGAAATATGAATGTGGTAGAACGATGTGAGTTCAGCAGTATAGAACGTTGTTTTTGGTTCGATTGAATGATTTTTCAGCTAAAATACGTTCTGTGAGATTGCTGTTATGTCACTTGATTGGAACTTAACATTATAAATCACTAAACCATAGGGAACGAAGAGGAAGCTTCATTTTATTTTACCTTACTCTCTTAGCGTAGCTTTTCTCTGCTTTTTAGGAAGAGGGAAAGAAAGGCTGCTGCTAACTGCCAGAAACACAACTTGAGACTACTTAATCGAGACCAAGGAGGTGGAGGTTCGAATCATTAATATGTTTTTATAATTAACTTTTGTTGGTTGAAGTTTCTTTATAGATTAGAATCATTGTTGGGATTCTGGAGAATATTATTGGCGATAGACTGATAGTTCTTTTTTTCAAATGTATAGTTAAATGTTAGATCCATCCACTTTATACTCCATCTCTAGTTAGTTTTGTTTCTTAGAATCTTTTTTATGTCTGTAGCTTTCTTTGCTGAAATGGAAGATTTTAAGATAATCTAATTAAAAATTGACTGCAGTTAA

mRNA sequence

CGAGAGACGACGATCCATTTTTGCTTTGCAGTGATTTGACCGCAAATGAATCCTTCAAATCCAAGTTTCTTCCTCGTTGATCCAACCGTTTTTCTCAATCTTCTTCTCTGAAATACAGTGTTTCTATTCCGACTGTAGCATTTTATCTGCACTTTTTTCCGGAATCTAGATCTAAGCTTACTGTAGATTCTTTGGTTGTTTCTGTTCGATTTTCCCGAAGAGTGATTGATTGAATTATCCGGTATGAAAGAAGCAAAACCGGTTAAGTTCAATCTTCATCAGCATCAAGATCATCAGAATGGTCATTTGGCTCCATTCAAGCTCGCTAAATTATTCGATCCAGAAGCCTCCTGGGACAAGGACCAACTGGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATTTTCTTGGCGATATCAACAAGCGTTGTATATGGATACTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTCCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGATTGGCAAAGAATGATTTGACATCCTGAAAATTACTTGGAAGAGGGAAAGAAAGGCTGCTGCTAACTGCCAGAAACACAACTTGAGACTACTTAATCGAGACCAAGGAGGTGGAGGTTCGAATCATTAATATGTTTTTATAATTAACTTTTGTTGGTTGAAGTTTCTTTATAGATTAGAATCATTGTTGGGATTCTGGAGAATATTATTGGCGATAGACTGATAGTTCTTTTTTTCAAATGTATAGTTAAATGTTAGATCCATCCACTTTATACTCCATCTCTAGTTAGTTTTGTTTCTTAGAATCTTTTTTATGTCTGTAGCTTTCTTTGCTGAAATGGAAGATTTTAAGATAATCTAATTAAAAATTGACTGCAGTTAA

Coding sequence (CDS)

ATGAAAGAAGCAAAACCGGTTAAGTTCAATCTTCATCAGCATCAAGATCATCAGAATGGTCATTTGGCTCCATTCAAGCTCGCTAAATTATTCGATCCAGAAGCCTCCTGGGACAAGGACCAACTGGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATTTTCTTGGCGATATCAACAAGCGTTGTATATGGATACTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTCCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGA

Protein sequence

MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWILVYSLAHF

Homology

[Close]

BLAST of PI0013798 vs. ExPASy Swiss-Prot
Match: Q9CQT9 (Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-18
Identity = 45/112 (40.18%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 19  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLA 78
           NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F  
Sbjct: 17  NGALKVSVWSKVLRSDAAWDDKDEFLDVIYWFRQIIALVLGVIWGVLPLRGFLGIAGFCL 76

Query: 79  ISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWILVYSLAHF 130
           I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF++ WI+ Y+  H+
Sbjct: 77  INAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVIWIIFYTAIHY 128

[Close]

BLAST of PI0013798 vs. ExPASy Swiss-Prot
Match: Q9BUV8 (Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.1e-15
Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 19  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLA 78
           NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F  
Sbjct: 17  NGALKVSVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCL 76

Query: 79  ISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWILVYSLAH 129
           I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF++     ++  H
Sbjct: 77  INAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVCVADSFTTGH 127

[Close]

BLAST of PI0013798 vs. ExPASy TrEMBL
Match: A0A1S4E4J0 (uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103502078 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.0e-66
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLL
Sbjct: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. ExPASy TrEMBL
Match: A0A5D3DK85 (Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001250 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.0e-66
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLL
Sbjct: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. ExPASy TrEMBL
Match: A0A0A0KFE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190330 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.3e-66
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLL
Sbjct: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVILGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. ExPASy TrEMBL
Match: A0A6J1JFH8 (uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484545 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65
Identity = 125/129 (96.90%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKE+KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL
Sbjct: 1   MKESKPIKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. ExPASy TrEMBL
Match: A0A6J1G7Y2 (uncharacterized protein C20orf24 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451658 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.0e-65
Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKEA PVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL
Sbjct: 1   MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WG+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGAIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. NCBI nr
Match: XP_038900616.1 (respirasome Complex Assembly Factor 1-like [Benincasa hispida])

HSP 1 Score: 261.5 bits (667), Expect = 3.7e-66
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKE+KPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL
Sbjct: 1   MKESKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. NCBI nr
Match: XP_008464121.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo] >XP_016903137.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo] >TYK24026.1 Rab5-interacting [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 8.3e-66
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLL
Sbjct: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. NCBI nr
Match: XP_004143124.1 (uncharacterized protein RAB5IF homolog [Cucumis sativus] >KGN47142.1 hypothetical protein Csa_020819 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLL
Sbjct: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVILGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. NCBI nr
Match: XP_022986965.1 (uncharacterized protein C20orf24 homolog [Cucurbita maxima] >XP_022986966.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima])

HSP 1 Score: 258.5 bits (659), Expect = 3.2e-65
Identity = 125/129 (96.90%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKE+KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL
Sbjct: 1   MKESKPIKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. NCBI nr
Match: XP_022947918.1 (uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata])

HSP 1 Score: 258.1 bits (658), Expect = 4.1e-65
Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60
           MKEA PVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL
Sbjct: 1   MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 60

Query: 61  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120
           WG+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW
Sbjct: 61  WGAIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 120

Query: 121 ILVYSLAHF 130
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129

[Close]

BLAST of PI0013798 vs. TAIR 10
Match: AT5G59410.1 (Rab5-interacting family protein )

HSP 1 Score: 214.5 bits (545), Expect = 4.9e-56
Identity = 103/130 (79.23%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 1   MKEAKPVKFN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGL 60
           MKE+K  K N L Q ++HQN HL+P KLAKLFDP+ASWDKDQLGDVLHWIRQ V ++ GL
Sbjct: 1   MKESKSAKLNQLQQQENHQNAHLSPSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLISGL 60

Query: 61  LWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLA 120
           LWGSIPLVGGIW ++FLAIS+ +VYGYYAMILKVDEE+FGGH ALLQEGLFAS+TLFLLA
Sbjct: 61  LWGSIPLVGGIWIILFLAISSGIVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLA 120

Query: 121 WILVYSLAHF 130
           WILVYSLAHF
Sbjct: 121 WILVYSLAHF 130

[Close]

BLAST of PI0013798 vs. TAIR 10
Match: AT2G29020.1 (Rab5-interacting family protein )

HSP 1 Score: 191.8 bits (486), Expect = 3.4e-49
Identity = 93/133 (69.92%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 1   MKEAKPVKFNLHQHQD----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVV 60
           MKE K  K +  Q Q     HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++
Sbjct: 1   MKEGKSSKSSSQQEQHEQIYHQNSHLGSFNFAKLFDSEASWDKDQLGDVLHWIRQVVGLL 60

Query: 61  LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLF 120
            GLLWG+IPLVGGIW L+FLAIS+ +VYGYYA++LK+DEE+FGGH ALLQ+GLFAS++LF
Sbjct: 61  CGLLWGAIPLVGGIWLLLFLAISSGIVYGYYALVLKIDEEDFGGHAALLQDGLFASLSLF 120

Query: 121 LLAWILVYSLAHF 130
           LLAWILVYSL+ F
Sbjct: 121 LLAWILVYSLSSF 133

The following BLAST results are available for this feature:

BLAST of PI0013798 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQT9	3.0e-18	40.18	Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV...	[more]
Q9BUV8	3.1e-15	38.74	Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=...	[more]

BLAST of PI0013798 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4J0	4.0e-66	99.22	uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103502078...	[more]
A0A5D3DK85	4.0e-66	99.22	Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001...	[more]
A0A0A0KFE5	5.3e-66	98.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190330 PE=4 SV=1	[more]
A0A6J1JFH8	1.5e-65	96.90	uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1G7Y2	2.0e-65	97.67	uncharacterized protein C20orf24 homolog isoform X2 OS=Cucurbita moschata OX=366...	[more]

BLAST of PI0013798 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900616.1	3.7e-66	99.22	respirasome Complex Assembly Factor 1-like [Benincasa hispida]	[more]
XP_008464121.1	8.3e-66	99.22	PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo] >XP_016903137...	[more]
XP_004143124.1	1.1e-65	98.45	uncharacterized protein RAB5IF homolog [Cucumis sativus] >KGN47142.1 hypothetica...	[more]
XP_022986965.1	3.2e-65	96.90	uncharacterized protein C20orf24 homolog [Cucurbita maxima] >XP_022986966.1 unch...	[more]
XP_022947918.1	4.1e-65	97.67	uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata]	[more]

BLAST of PI0013798 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59410.1	4.9e-56	79.23	Rab5-interacting family protein	[more]
AT2G29020.1	3.4e-49	69.92	Rab5-interacting family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029008	Rab5-interacting protein family	PFAM	PF07019	Rab5ip	coord: 45..124 e-value: 6.5E-14 score: 52.2
IPR010742	Rab5-interacting protein	PANTHER	PTHR12906	PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN	coord: 1..129
None	No IPR available	PANTHER	PTHR12906:SF2	BNAA04G16800D PROTEIN	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013798.1	PI0013798.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006996	organelle organization
cellular_component	GO:0016021	integral component of membrane