PI0013741 (gene) Melon (PI 482460) v1

Overview
NamePI0013741
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 6356052 .. 6356409 (+)
RNA-Seq ExpressionPI0013741
SyntenyPI0013741
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAAACAGGGGAAAACAGATCGTGGGTGTTGTCTTCAGTTGAAGAGTGGCTCCATTGTCGGAAGCTTTTTGAGAAATGAAATGGAAAGCAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAGGGAAAAAGGATGGAATTTTGTGCACGTTCAACGGTCTTGATTTTGCAGGCTTTTACAATAATCATCCCCAATACAGGATTGATTGTAAGAAACTTCTTACAAAGAATTTGAACAGTAAAGTGATTGGGCCAACATCTGCTTGGTTGCACAATTTCAATCCGACATCATTCATCCATATGCCAAAACACAACTGTTTTTGTGGATCTCCCCTGCGCTCTGCGTTTTTGTCTTAA

mRNA sequence

ATGGGAAAAACAGGGGAAAACAGATCGTGGGTGTTGTCTTCAGTTGAAGAGTGGCTCCATTGCTTTTACAATAATCATCCCCAATACAGGATTGATTGTAAGAAACTTCTTACAAAGAATTTGAACAGTAAAGTGATTGGGCCAACATCTGCTTGGTTGCACAATTTCAATCCGACATCATTCATCCATATGCCAAAACACAACTGTTTTTGTGGATCTCCCCTGCGCTCTGCGTTTTTGTCTTAA

Coding sequence (CDS)

ATGGGAAAAACAGGGGAAAACAGATCGTGGGTGTTGTCTTCAGTTGAAGAGTGGCTCCATTGCTTTTACAATAATCATCCCCAATACAGGATTGATTGTAAGAAACTTCTTACAAAGAATTTGAACAGTAAAGTGATTGGGCCAACATCTGCTTGGTTGCACAATTTCAATCCGACATCATTCATCCATATGCCAAAACACAACTGTTTTTGTGGATCTCCCCTGCGCTCTGCGTTTTTGTCTTAA

Protein sequence

MGKTGENRSWVLSSVEEWLHCFYNNHPQYRIDCKKLLTKNLNSKVIGPTSAWLHNFNPTSFIHMPKHNCFCGSPLRSAFLS
Homology
[Close]
BLAST of PI0013741 vs. ExPASy TrEMBL
Match: A0A0A0KDH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358070 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.0e-24
Identity = 66/127 (51.97%), Postives = 70/127 (55.12%), Query Frame = 0 

Query: 1   MGKTGENRSWVLSSVEEWLHCF-------------------------------------- 60
           MGKTGENRSWVL SVEEWLHC+                                      
Sbjct: 1   MGKTGENRSWVLLSVEEWLHCWKLFEKRNGKQKKKKKKKKKKKKKKKKKKKKKREEKKRK 60

Query: 61  ------YNNHPQYRIDCKKL-LTKNLNSKVIGPTSAWLHNFNPTSFIHM--PKHNCFCGS 81
                   + P  RIDCKKL +T+NL SKVIGPTS WLH FNPTSFIHM  PKHNCFCGS
Sbjct: 61  DGIWLLQQSSPIERIDCKKLPVTENLKSKVIGPTSGWLHKFNPTSFIHMPKPKHNCFCGS 120

[Close]
BLAST of PI0013741 vs. NCBI nr
Match: KAE8647210.1 (hypothetical protein Csa_019061 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 8.4e-24
Identity = 66/125 (52.80%), Postives = 70/125 (56.00%), Query Frame = 0 

Query: 1   MGKTGENRSWVLSSVEEWLHCF-------------------------------------- 60
           MGKTGENRSWVL SVEEWLHC+                                      
Sbjct: 1   MGKTGENRSWVLLSVEEWLHCWKLFEKRNGKQKKKKKKKKMKMKMKKKKKTREEKKRKDG 60

Query: 61  ----YNNHPQYRIDCKKL-LTKNLNSKVIGPTSAWLHNFNPTSFIHM--PKHNCFCGSPL 81
                 + P  RIDCKKL +T+NL SKVIGPTS WLH FNPTSFIHM  PKHNCFCGSPL
Sbjct: 61  IWLLQQSSPIERIDCKKLPVTENLKSKVIGPTSGWLHKFNPTSFIHMPKPKHNCFCGSPL 120

The following BLAST results are available for this feature:
BLAST of PI0013741 vs.
Match NameE-valueIdentityDescription
BLAST of PI0013741 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDH07.0e-2451.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358070 PE=4 SV=1[more]
BLAST of PI0013741 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647210.18.4e-2452.80hypothetical protein Csa_019061 [Cucumis sativus][more]
BLAST of PI0013741 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0013741.1PI0013741.1mRNA