PI0013619 (gene) Melon (PI 482460) v1

Overview


Name	PI0013619
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr01: 6286154 .. 6286720 (+)
RNA-Seq Expression	PI0013619
Synteny	PI0013619

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTTTTTATTGGCATTCTTTTGTTTAACATGAATGTTGTTGATGTTGCAAGTGCAAATAGACCCATCAAACGTCGTCCTTTTGAAGATAAAGCCAAAGTTGTATGTGGTCCTCCAAGAAGGCCTATAGATTATGAATTAGATGATGATGTTTACAAATATGCAAGCTGGTACAATACAGTTTATCCTTGCAAATCTCTACGAAAAGCCAAACATAGTATCAATGGAGACAAAGTAAGAAATACTTTTGTTGATAACACTTCACAAAAGATTAAAGGAGATAAATATCATCATATTGTTGACAACACCTCACAAAAGATTAAAGGGGATAAAAATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGAGATAAAAATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTATTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATGATTCATCCTCAACCATCCATTGTTTAA

mRNA sequence

ATGGCCGTTTTTATTGGCATTCTTTTGTTTAACATGAATGTTGTTGATGTTGCAAGTGCAAATAGACCCATCAAACGTCGTCCTTTTGAAGATAAAGCCAAAGTTGTATGTGGTCCTCCAAGAAGGCCTATAGATTATGAATTAGATGATGATGTTTACAAATATGCAAGCTGGTACAATACAGTTTATCCTTGCAAATCTCTACGAAAAGCCAAACATAGTATCAATGGAGACAAAGTAAGAAATACTTTTGTTGATAACACTTCACAAAAGATTAAAGGAGATAAATATCATCATATTGTTGACAACACCTCACAAAAGATTAAAGGGGATAAAAATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGAGATAAAAATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTATTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATGATTCATCCTCAACCATCCATTGTTTAA

Coding sequence (CDS)

ATGGCCGTTTTTATTGGCATTCTTTTGTTTAACATGAATGTTGTTGATGTTGCAAGTGCAAATAGACCCATCAAACGTCGTCCTTTTGAAGATAAAGCCAAAGTTGTATGTGGTCCTCCAAGAAGGCCTATAGATTATGAATTAGATGATGATGTTTACAAATATGCAAGCTGGTACAATACAGTTTATCCTTGCAAATCTCTACGAAAAGCCAAACATAGTATCAATGGAGACAAAGTAAGAAATACTTTTGTTGATAACACTTCACAAAAGATTAAAGGAGATAAATATCATCATATTGTTGACAACACCTCACAAAAGATTAAAGGGGATAAAAATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGAGATAAAAATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTATTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATGATTCATCCTCAACCATCCATTGTTTAA

Protein sequence

MAVFIGILLFNMNVVDVASANRPIKRRPFEDKAKVVCGPPRRPIDYELDDDVYKYASWYNTVYPCKSLRKAKHSINGDKVRNTFVDNTSQKIKGDKYHHIVDNTSQKIKGDKNHHIVDNTSQEIKGDKNHHIVDNTSQEIKGDKDHHIIDNTSQEIKGDKDHHIVDNTSQEIKGDKDHHMIHPQPSIV

Homology

[Close]

BLAST of PI0013619 vs. ExPASy TrEMBL
Match: A0A0A0K605 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269050 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.3e-52
Identity = 104/133 (78.20%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MAVFIGILLFNMNVVDVASANRPIKRRPFEDKAKVVCGPPRRPIDYELDDDVYKYASWYN 60
           MAVFIGILLF++N V++ASA RPIKRR + D  KVVCGPPRR ID+ELDDD  KYASWYN
Sbjct: 8   MAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQKYASWYN 67

Query: 61  TVYPCKSLRKAKHSINGDKVRNTFVDNTSQKIKGDKYHHIVDNTSQKIKGDKNHHIVDNT 120
           TVYPCKSLRKAKHSINGDKV NTF  NTSQ +KGDK  HIVDNTSQ+IKGDK+HHIVD  
Sbjct: 68  TVYPCKSLRKAKHSINGDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKDHHIVDTI 127

Query: 121 SQEIKGDKNHHIV 134
           SQEIKGDK+HH++
Sbjct: 128 SQEIKGDKDHHLI 140

[Close]

BLAST of PI0013619 vs. ExPASy TrEMBL
Match: A0A0A0K3T5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270050 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 5.3e-51
Identity = 103/133 (77.44%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MAVFIGILLFNMNVVDVASANRPIKRRPFEDKAKVVCGPPRRPIDYELDDDVYKYASWYN 60
           MAVFIGILLF++N V++ASA RPIKRR + D  KVVCGPPRR ID+ELDDD  KYASWYN
Sbjct: 8   MAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQKYASWYN 67

Query: 61  TVYPCKSLRKAKHSINGDKVRNTFVDNTSQKIKGDKYHHIVDNTSQKIKGDKNHHIVDNT 120
           TVYPCKSLRKAKHSIN DKV NTF  NTSQ +KGDK  HIVDNTSQ+IKGDK+HHIVD  
Sbjct: 68  TVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKDHHIVDTI 127

Query: 121 SQEIKGDKNHHIV 134
           SQEIKGDK+HH++
Sbjct: 128 SQEIKGDKDHHLI 140

[Close]

BLAST of PI0013619 vs. ExPASy TrEMBL
Match: A0A7M7P4X2 (Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.4e-04
Identity = 27/101 (26.73%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 82  NTFVDNTSQKIKGDKYHHIVDNTSQKIKGDKNHHIVDNTSQEIKGDKNHHIVDNTSQEIK 141
           N F++NTS   + +  +H  +NTS   + + ++H ++NTS   + + ++H ++NTS   +
Sbjct: 318 NHFINNTSNNTRHNTSNHSSNNTSNNARHNTSNHSINNTSNNTRHNTSNHFINNTSNNTR 377

Query: 142 GDKDHHIIDNTSQEIKGDKDHHIVDNTSQEIKGDKDHHMIH 183
            +  +H ++NTS   + +  +H ++NTS   + +  +H I+
Sbjct: 378 HNTSNHSVNNTSNNTRHNTSNHFINNTSNNARHNTSNHSIN 418

[Close]

BLAST of PI0013619 vs. NCBI nr
Match: KAE8646140.1 (hypothetical protein Csa_015664 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 2.0e-52
Identity = 105/133 (78.95%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   MAVFIGILLFNMNVVDVASANRPIKRRPFEDKAKVVCGPPRRPIDYELDDDVYKYASWYN 60
           MAVFIGILLF++N V++ASA RPIKRRP+ED  KVVCGPPRR ID+ELDDD  KYASWYN
Sbjct: 8   MAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQKYASWYN 67

Query: 61  TVYPCKSLRKAKHSINGDKVRNTFVDNTSQKIKGDKYHHIVDNTSQKIKGDKNHHIVDNT 120
           TVYPCKSLRKAKHSIN DKV NTF  NTSQ +KGDK  HIVDNTSQ+IKGDK+HHIVD  
Sbjct: 68  TVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKDHHIVDTI 127

Query: 121 SQEIKGDKNHHIV 134
           SQEIKGDK+HH++
Sbjct: 128 SQEIKGDKDHHLI 140

[Close]

BLAST of PI0013619 vs. NCBI nr
Match: KGN44636.2 (hypothetical protein Csa_016656 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-51
Identity = 103/133 (77.44%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MAVFIGILLFNMNVVDVASANRPIKRRPFEDKAKVVCGPPRRPIDYELDDDVYKYASWYN 60
           MAVFIGILLF++N V++ASA RPIKRR + D  KVVCGPPRR ID+ELDDD  KYASWYN
Sbjct: 8   MAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQKYASWYN 67

Query: 61  TVYPCKSLRKAKHSINGDKVRNTFVDNTSQKIKGDKYHHIVDNTSQKIKGDKNHHIVDNT 120
           TVYPCKSLRKAKHSINGDKV NTF  NTSQ +KGDK  HIVDNTSQ+IKGDK+HH+VD  
Sbjct: 68  TVYPCKSLRKAKHSINGDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKDHHLVDTI 127

Query: 121 SQEIKGDKNHHIV 134
           SQEIKGDK+HH++
Sbjct: 128 SQEIKGDKDHHLI 140

The following BLAST results are available for this feature:

BLAST of PI0013619 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013619 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K605	6.3e-52	78.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269050 PE=4 SV=1	[more]
A0A0A0K3T5	5.3e-51	77.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270050 PE=4 SV=1	[more]
A0A7M7P4X2	6.4e-04	26.73	Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1	[more]

BLAST of PI0013619 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646140.1	2.0e-52	78.95	hypothetical protein Csa_015664 [Cucumis sativus]	[more]
KGN44636.2	2.2e-51	77.44	hypothetical protein Csa_016656 [Cucumis sativus]	[more]

BLAST of PI0013619 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	69349	Phage fibre proteins	coord: 85..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013619.1	PI0013619.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030026	cellular manganese ion homeostasis
biological_process	GO:0006880	intracellular sequestering of iron ion
biological_process	GO:0034755	iron ion transmembrane transport
biological_process	GO:0071421	manganese ion transmembrane transport
cellular_component	GO:0010168	ER body
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005381	iron ion transmembrane transporter activity
molecular_function	GO:0005384	manganese ion transmembrane transporter activity