PI0013526 (gene) Melon (PI 482460) v1

Overview
NamePI0013526
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 3082065 .. 3082393 (-)
RNA-Seq ExpressionPI0013526
SyntenyPI0013526
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCTTACGTGGCAGAATCGCGTCTGGGAGTTTACGACAATAGTCAGCATACAGCTGTAACTTTAGCGGTGAAACTAACACGTGTTGGTTCTACGGATACGGCGTACCCGATCCCAGCTCTCCTCGTCTACTCCTCGGTTTTTAATTTGAATTTTAATTTTAAGGCGAGAAGCATGCACACGTGCCAAAGAGTGGTGATGCACACGTGCCTGACGGCGGAAGGAATTTTTCAGTGGATAAGGGTATACCCGTAGTCCTCAAATCAAATAGCTCCTTTACCACCGGCATTAAGAGTGGGGTAAATTTTTGGTATTTTTTTTACTAA

mRNA sequence

ATGGGGTCTTACGTGGCAGAATCGCGTCTGGGAGTTTACGACAATAGTCAGCATACAGCTGTAACTTTAGCGGTGAAACTAACACGTGTTGGTTCTACGGATACGGCGTACCCGATCCCAGCTCTCCTCAAGCATGCACACGTGCCAAAGAGTGGTGATGCACACGTGCCTGACGGCGGAAGGAATTTTTCAGTGGATAAGGGTATACCCGTAGTCCTCAAATCAAATAGCTCCTTTACCACCGGCATTAAGAGTGGGGTAAATTTTTGGTATTTTTTTTACTAA

Coding sequence (CDS)

ATGGGGTCTTACGTGGCAGAATCGCGTCTGGGAGTTTACGACAATAGTCAGCATACAGCTGTAACTTTAGCGGTGAAACTAACACGTGTTGGTTCTACGGATACGGCGTACCCGATCCCAGCTCTCCTCAAGCATGCACACGTGCCAAAGAGTGGTGATGCACACGTGCCTGACGGCGGAAGGAATTTTTCAGTGGATAAGGGTATACCCGTAGTCCTCAAATCAAATAGCTCCTTTACCACCGGCATTAAGAGTGGGGTAAATTTTTGGTATTTTTTTTACTAA

Protein sequence

MGSYVAESRLGVYDNSQHTAVTLAVKLTRVGSTDTAYPIPALLKHAHVPKSGDAHVPDGGRNFSVDKGIPVVLKSNSSFTTGIKSGVNFWYFFY
Homology
[Close]
BLAST of PI0013526 vs. ExPASy TrEMBL
Match: A0A0A0KHQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511680 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 58/76 (76.32%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 1  MGSYVAESRLGVYDNSQHTAVTLAVKLTRVGSTDTAYPIPALL---KHAHVPKSGDAHVP 60
          MGSYVAESRLGVYDNSQ TAVTLAVKLTRV S+DT YPI  LL   KHAHVP SGDAHVP
Sbjct: 1  MGSYVAESRLGVYDNSQRTAVTLAVKLTRVRSSDTPYPILPLLLGSKHAHVPMSGDAHVP 60

Query: 61 DGGRNFSVDKGIPVVL 74
          DG RNF  D   P +L
Sbjct: 61 DGARNFPSDNENPFLL 76

[Close]
BLAST of PI0013526 vs. ExPASy TrEMBL
Match: A0A5D3CM28 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005950 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.8e-06
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 7   ESRLGVYDNSQHTAVTLAVKLTRVGSTDTAYPIPALLKHAHV 49
           +SRLGVYDNSQ TAVT AVKLTRV S DT YPIP LL ++ V
Sbjct: 59  QSRLGVYDNSQPTAVTSAVKLTRVRSPDTPYPIPPLLVYSSV 100

[Close]
BLAST of PI0013526 vs. NCBI nr
Match: KGN49053.1 (hypothetical protein Csa_003603 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-20
Identity = 58/76 (76.32%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 1  MGSYVAESRLGVYDNSQHTAVTLAVKLTRVGSTDTAYPIPALL---KHAHVPKSGDAHVP 60
          MGSYVAESRLGVYDNSQ TAVTLAVKLTRV S+DT YPI  LL   KHAHVP SGDAHVP
Sbjct: 1  MGSYVAESRLGVYDNSQRTAVTLAVKLTRVRSSDTPYPILPLLLGSKHAHVPMSGDAHVP 60

Query: 61 DGGRNFSVDKGIPVVL 74
          DG RNF  D   P +L
Sbjct: 61 DGARNFPSDNENPFLL 76

[Close]
BLAST of PI0013526 vs. NCBI nr
Match: TYK12997.1 (hypothetical protein E5676_scaffold255G005950 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-05
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 7   ESRLGVYDNSQHTAVTLAVKLTRVGSTDTAYPIPALLKHAHV 49
           +SRLGVYDNSQ TAVT AVKLTRV S DT YPIP LL ++ V
Sbjct: 59  QSRLGVYDNSQPTAVTSAVKLTRVRSPDTPYPIPPLLVYSSV 100

The following BLAST results are available for this feature:
BLAST of PI0013526 vs.
Match NameE-valueIdentityDescription
BLAST of PI0013526 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHQ31.1e-2076.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511680 PE=4 SV=1[more]
A0A5D3CM285.8e-0673.81Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0013526 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49053.12.3e-2076.32hypothetical protein Csa_003603 [Cucumis sativus][more]
TYK12997.11.2e-0573.81hypothetical protein E5676_scaffold255G005950 [Cucumis melo var. makuwa][more]
BLAST of PI0013526 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0013526.1PI0013526.1mRNA