PI0013401 (gene) Melon (PI 482460) v1

Overview
NamePI0013401
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 18385787 .. 18386179 (+)
RNA-Seq ExpressionPI0013401
SyntenyPI0013401
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTGATCAAATTGGAGAAGTGGTGTTTCGGATTCATAATCTTCTAGTGAATTGTATGTCTAGAAAGATGACATGGATATTGGAAACTATGGTGGGAAAAGTTGAAGAAATCTTTTGCGATGATTGTAGTAGATGGACATATCCTTTCATGAAGATACAAGTGAAAATTATATATTATGCAACCTCTGCAAAGGTGTTGCAAGATAAAAAAACAAATGAAGGAAAAGAAGTATGGTGTCTTGTCTTGTATGAGAAATGATCAGATATGCGTTTCACTTGTGGTAGGTTGGGTCATTCGGTTCAGAAATATCAAAAGTCGTGGGATACAAACAGTGAATTCCATGGATATGGGGCGTGGGTGAAGGGGACAATGGTGAAGAAGGAATAA

mRNA sequence

ATGGCGGCTGATCAAATTGGAGAAGTGGTGTTTCGGATTCATAATCTTCTAGTGAATTGTATGTCTAGAAAGATGACATGGATATTGGAAACTATGGTGGGAAAAGTTGAAGAAATCTTTTGCGATGATTGTAGTAGATGGACATATCCTTTCATGAAGATACAATCGTGGGATACAAACAGTGAATTCCATGGATATGGGGCGTGGGTGAAGGGGACAATGGTGAAGAAGGAATAA

Coding sequence (CDS)

ATGGCGGCTGATCAAATTGGAGAAGTGGTGTTTCGGATTCATAATCTTCTAGTGAATTGTATGTCTAGAAAGATGACATGGATATTGGAAACTATGGTGGGAAAAGTTGAAGAAATCTTTTGCGATGATTGTAGTAGATGGACATATCCTTTCATGAAGATACAATCGTGGGATACAAACAGTGAATTCCATGGATATGGGGCGTGGGTGAAGGGGACAATGGTGAAGAAGGAATAA

Protein sequence

MAADQIGEVVFRIHNLLVNCMSRKMTWILETMVGKVEEIFCDDCSRWTYPFMKIQSWDTNSEFHGYGAWVKGTMVKKE
Homology
[Close]
BLAST of PI0013401 vs. ExPASy TrEMBL
Match: A0A0A0LWT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306790 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27
Identity = 64/84 (76.19%), Postives = 67/84 (79.76%), Query Frame = 0 

Query: 1  MAADQIGEVVFRIHNLLVNCMSRKMTWILETMVGKVEEIFCDDCSRWTYPFMKIQSWDT- 60
          M ADQIGE+VFRIHNLLVN MSR M W LETMVGKVEEI  DDCSRWTYPFMKIQ  +  
Sbjct: 1  MTADQIGELVFRIHNLLVNYMSRNMAWKLETMVGKVEEIVYDDCSRWTYPFMKIQFGNVR 60

Query: 61 -----NSEFHGYGAWVKGTMVKKE 79
               NSEFHGYGAW+K TMVKKE
Sbjct: 61 SRGIQNSEFHGYGAWMKATMVKKE 84

[Close]
BLAST of PI0013401 vs. NCBI nr
Match: KGN65307.1 (hypothetical protein Csa_019806 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 3.5e-27
Identity = 64/84 (76.19%), Postives = 67/84 (79.76%), Query Frame = 0 

Query: 1  MAADQIGEVVFRIHNLLVNCMSRKMTWILETMVGKVEEIFCDDCSRWTYPFMKIQSWDT- 60
          M ADQIGE+VFRIHNLLVN MSR M W LETMVGKVEEI  DDCSRWTYPFMKIQ  +  
Sbjct: 1  MTADQIGELVFRIHNLLVNYMSRNMAWKLETMVGKVEEIVYDDCSRWTYPFMKIQFGNVR 60

Query: 61 -----NSEFHGYGAWVKGTMVKKE 79
               NSEFHGYGAW+K TMVKKE
Sbjct: 61 SRGIQNSEFHGYGAWMKATMVKKE 84

The following BLAST results are available for this feature:
BLAST of PI0013401 vs.
Match NameE-valueIdentityDescription
BLAST of PI0013401 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWT01.7e-2776.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306790 PE=4 SV=1[more]
BLAST of PI0013401 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65307.13.5e-2776.19hypothetical protein Csa_019806 [Cucumis sativus][more]
BLAST of PI0013401 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0013401.1PI0013401.1mRNA