PI0013341 (gene) Melon (PI 482460) v1

Overview
NamePI0013341
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 26233032 .. 26233184 (-)
RNA-Seq ExpressionPI0013341
SyntenyPI0013341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGTGCCGGTCCTTCAACCGGCTCTATCATCCTCGAGTCTTCTTCACTTTGCAAAAAAAAATTCTCCGCTCTGTAGTTCTGTCCCATTAGCTGTTCGCTTCAGTCCTTCGTCAATTAGAAAAATTAGGGTTTACTTTTCCTTTTTGTGA

mRNA sequence

ATGCACGTGCCGGTCCTTCAACCGGCTCTATCATCCTCGAGTCTTCTTCACTTTGCAAAAAAAAATTCTCCGCTCTGTAGTTCTGTCCCATTAGCTGTTCGCTTCAGTCCTTCGTCAATTAGAAAAATTAGGGTTTACTTTTCCTTTTTGTGA

Coding sequence (CDS)

ATGCACGTGCCGGTCCTTCAACCGGCTCTATCATCCTCGAGTCTTCTTCACTTTGCAAAAAAAAATTCTCCGCTCTGTAGTTCTGTCCCATTAGCTGTTCGCTTCAGTCCTTCGTCAATTAGAAAAATTAGGGTTTACTTTTCCTTTTTGTGA

Protein sequence

MHVPVLQPALSSSSLLHFAKKNSPLCSSVPLAVRFSPSSIRKIRVYFSFL
Homology
[Close]
BLAST of PI0013341 vs. ExPASy TrEMBL
Match: A0A0A0K9S7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428200 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-10
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 1  MHVPVLQPALSSSSLLHFAKKNSPLCSSVPLAVRFSPSSIRK 43
          MHVPVLQPA S+  LLHFAKK+SPLCSSVPLAVRFSPSSIRK
Sbjct: 25 MHVPVLQPAPSTLRLLHFAKKSSPLCSSVPLAVRFSPSSIRK 66

[Close]
BLAST of PI0013341 vs. NCBI nr
Match: KGN45132.1 (hypothetical protein Csa_015738 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 5.6e-10
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 1  MHVPVLQPALSSSSLLHFAKKNSPLCSSVPLAVRFSPSSIRK 43
          MHVPVLQPA S+  LLHFAKK+SPLCSSVPLAVRFSPSSIRK
Sbjct: 25 MHVPVLQPAPSTLRLLHFAKKSSPLCSSVPLAVRFSPSSIRK 66

The following BLAST results are available for this feature:
BLAST of PI0013341 vs.
Match NameE-valueIdentityDescription
BLAST of PI0013341 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9S72.7e-1088.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428200 PE=4 SV=1[more]
BLAST of PI0013341 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45132.15.6e-1088.10hypothetical protein Csa_015738 [Cucumis sativus][more]
BLAST of PI0013341 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0013341.1PI0013341.1mRNA