PI0013298 (gene) Melon (PI 482460) v1

Overview


Name	PI0013298
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr05: 12070626 .. 12070991 (+)
RNA-Seq Expression	PI0013298
Synteny	PI0013298

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTGCATTACGACACAGAAGGCGTTTAACTTAGGCGAAGTAATCAAAACAACCATCTTTGCATGGATGGAAATGCCTAAAGGAGCAATGCTCTTTCCCTCCACTGTGGAAAAATTATGTCTAAAATTCCATTCTTCACTGGCGAAATACCCCCAACAAGATATTCTAGGCAAGGTATGTGCTCAGACGGGATTAAACAAAATCATTATGTTTCATCAAAATAAAGAGAAAGAATGTTGTCTGAAAACCGGGGGCCAAGATAAAGATCCCGAAGGATTGAATAAAGATGAAAACCATCCACCTCTGACCGCAAAAAGAACTGTTGCATTCCCTTCGTCGCAAGCCCACGTTCGAATATCTTGA

mRNA sequence

ATGTACTGCATTACGACACAGAAGGCGTTTAACTTAGGCGAAGTAATCAAAACAACCATCTTTGCATGGATGGAAATGCCTAAAGGAGCAATGCTCTTTCCCTCCACTGTGGAAAAATTATGTCTAAAATTCCATTCTTCACTGGCGAAATACCCCCAACAAGATATTCTAGGCAAGGTATGTGCTCAGACGGGATTAAACAAAATCATTATGTTTCATCAAAATAAAGAGAAAGAATGTTGTCTGAAAACCGGGGGCCAAGATAAAGATCCCGAAGGATTGAATAAAGATGAAAACCATCCACCTCTGACCGCAAAAAGAACTGTTGCATTCCCTTCGTCGCAAGCCCACGTTCGAATATCTTGA

Coding sequence (CDS)

ATGTACTGCATTACGACACAGAAGGCGTTTAACTTAGGCGAAGTAATCAAAACAACCATCTTTGCATGGATGGAAATGCCTAAAGGAGCAATGCTCTTTCCCTCCACTGTGGAAAAATTATGTCTAAAATTCCATTCTTCACTGGCGAAATACCCCCAACAAGATATTCTAGGCAAGGTATGTGCTCAGACGGGATTAAACAAAATCATTATGTTTCATCAAAATAAAGAGAAAGAATGTTGTCTGAAAACCGGGGGCCAAGATAAAGATCCCGAAGGATTGAATAAAGATGAAAACCATCCACCTCTGACCGCAAAAAGAACTGTTGCATTCCCTTCGTCGCAAGCCCACGTTCGAATATCTTGA

Protein sequence

MYCITTQKAFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKVCAQTGLNKIIMFHQNKEKECCLKTGGQDKDPEGLNKDENHPPLTAKRTVAFPSSQAHVRIS

Homology

[Close]

BLAST of PI0013298 vs. ExPASy TrEMBL
Match: A0A5D3CAP7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001850 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.5e-26
Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 1   MYCITTQKAFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKV 60
           +YCI T+KA NLG +I++ I  WME P GAM F S VEKLCL+F  SL +Y QQDILG+V
Sbjct: 66  LYCIRTKKAINLGTIIQSAILTWMETPNGAMPFSSKVEKLCLRFIPSLTRYSQQDILGRV 125

Query: 61  CAQTGLNKIIMFHQNKEKECCLKTGGQDKDPEGLNKDENHPPLTAKRTVAFPSSQ 116
             Q+ LN++I+ HQNK++E  LKT G+ +DPEG+ + + HP +  KR VA    Q
Sbjct: 126 YTQSELNRVIILHQNKKEERNLKTVGRIRDPEGMKEKKIHPLVPVKRKVALTLMQ 180

[Close]

BLAST of PI0013298 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.8e-21
Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 9   AFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKVCAQTGLNK 68
           AFNLG +I+  IFAWME+PKGA  FPS +EKL LK   SLA  PQ+ I  +V  QT LN+
Sbjct: 137 AFNLGAIIQGAIFAWMEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNR 196

Query: 69  IIMFHQNKEKECCLKTGGQDKDPEGLNKDENHP-PLTAKRTVAFPSSQ 116
           +I FHQNKE+E  LKT G +K+PEG+   E+ P  L  KRT+A  S Q
Sbjct: 197 VITFHQNKEEEYHLKTLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQ 244

[Close]

BLAST of PI0013298 vs. ExPASy TrEMBL
Match: A0A5D3BEA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00170 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.8e-21
Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 9   AFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKVCAQTGLNK 68
           AFNLG +I+  I AWME+PKGA  FPS +EKL LK   SLA  PQ+ I  +V  QT LN+
Sbjct: 137 AFNLGAIIQGAILAWMEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNR 196

Query: 69  IIMFHQNKEKECCLKTGGQDKDPEGLNKDENHP-PLTAKRTVAFPSSQ 116
           +I FHQNKE+E  LKT G +K+P+G+   E+ P PL  KRT+A  S Q
Sbjct: 197 VITFHQNKEEEYHLKTLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQ 244

[Close]

BLAST of PI0013298 vs. ExPASy TrEMBL
Match: A0A5A7TGV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00400 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.8e-15
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 16  IKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKVCAQTGLNKIIMFHQN 75
           ++  +F WME PKG   FP T+EKLCLK+  SL + PQ++++   C+  GLN++I F+QN
Sbjct: 1   MQEALFTWMEHPKGVKPFPKTMEKLCLKYIPSLKELPQENMVEGRCSLAGLNRVITFYQN 60

Query: 76  KEKECCLKTGGQDKDPEGLNKDENHPPLTAKR 108
           KE+E C+KT G+ K  E    D + PP + KR
Sbjct: 61  KEEERCIKTLGKKKLEEDSEGDTSPPPPSLKR 92

[Close]

BLAST of PI0013298 vs. ExPASy TrEMBL
Match: A0A5A7V6C0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00540 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-14
Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 1   MYCITTQKAFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKV 60
           +YCI  +K FNLG V+      WM  PKG+  FP+  +K C K+ S+LA+YPQ D++G  
Sbjct: 108 LYCIMAKKPFNLGYVMNKAFLGWMRNPKGSKSFPTMAKKFCQKYLSTLARYPQTDMVGGK 167

Query: 61  CAQTGLNKIIMFHQNKEKECCLKTGGQDKDPEGLNKD 98
           C    LN+I   +QNKE+EC  K      +P+ + KD
Sbjct: 168 CNMASLNRIRTLNQNKEEECQGKV-----EPKKVTKD 199

[Close]

BLAST of PI0013298 vs. NCBI nr
Match: KAA0047718.1 (hypothetical protein E6C27_scaffold115G002320 [Cucumis melo var. makuwa] >TYK08372.1 hypothetical protein E5676_scaffold648G001850 [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25
Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 1   MYCITTQKAFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKV 60
           +YCI T+KA NLG +I++ I  WME P GAM F S VEKLCL+F  SL +Y QQDILG+V
Sbjct: 66  LYCIRTKKAINLGTIIQSAILTWMETPNGAMPFSSKVEKLCLRFIPSLTRYSQQDILGRV 125

Query: 61  CAQTGLNKIIMFHQNKEKECCLKTGGQDKDPEGLNKDENHPPLTAKRTVAFPSSQ 116
             Q+ LN++I+ HQNK++E  LKT G+ +DPEG+ + + HP +  KR VA    Q
Sbjct: 126 YTQSELNRVIILHQNKKEERNLKTVGRIRDPEGMKEKKIHPLVPVKRKVALTLMQ 180

[Close]

BLAST of PI0013298 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-21
Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 9   AFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKVCAQTGLNK 68
           AFNLG +I+  IFAWME+PKGA  FPS +EKL LK   SLA  PQ+ I  +V  QT LN+
Sbjct: 137 AFNLGAIIQGAIFAWMEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNR 196

Query: 69  IIMFHQNKEKECCLKTGGQDKDPEGLNKDENHP-PLTAKRTVAFPSSQ 116
           +I FHQNKE+E  LKT G +K+PEG+   E+ P  L  KRT+A  S Q
Sbjct: 197 VITFHQNKEEEYHLKTLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQ 244

[Close]

BLAST of PI0013298 vs. NCBI nr
Match: TYJ97633.1 (hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20
Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 9   AFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKVCAQTGLNK 68
           AFNLG +I+  I AWME+PKGA  FPS +EKL LK   SLA  PQ+ I  +V  QT LN+
Sbjct: 137 AFNLGAIIQGAILAWMEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNR 196

Query: 69  IIMFHQNKEKECCLKTGGQDKDPEGLNKDENHP-PLTAKRTVAFPSSQ 116
           +I FHQNKE+E  LKT G +K+P+G+   E+ P PL  KRT+A  S Q
Sbjct: 197 VITFHQNKEEEYHLKTLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQ 244

[Close]

BLAST of PI0013298 vs. NCBI nr
Match: KAA0040817.1 (hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa] >TYK17794.1 hypothetical protein E5676_scaffold306G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-14
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 16  IKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKVCAQTGLNKIIMFHQN 75
           ++  +F WME PKG   FP T+EKLCLK+  SL + PQ++++   C+  GLN++I F+QN
Sbjct: 1   MQEALFTWMEHPKGVKPFPKTMEKLCLKYIPSLKELPQENMVEGRCSLAGLNRVITFYQN 60

Query: 76  KEKECCLKTGGQDKDPEGLNKDENHPPLTAKR 108
           KE+E C+KT G+ K  E    D + PP + KR
Sbjct: 61  KEEERCIKTLGKKKLEEDSEGDTSPPPPSLKR 92

[Close]

BLAST of PI0013298 vs. NCBI nr
Match: KAA0063168.1 (hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 1   MYCITTQKAFNLGEVIKTTIFAWMEMPKGAMLFPSTVEKLCLKFHSSLAKYPQQDILGKV 60
           +YCI  +K FNLG V+      WM  PKG+  FP+  +K C K+ S+LA+YPQ D++G  
Sbjct: 108 LYCIMAKKPFNLGYVMNKAFLGWMRNPKGSKSFPTMAKKFCQKYLSTLARYPQTDMVGGK 167

Query: 61  CAQTGLNKIIMFHQNKEKECCLKTGGQDKDPEGLNKD 98
           C    LN+I   +QNKE+EC  K      +P+ + KD
Sbjct: 168 CNMASLNRIRTLNQNKEEECQGKV-----EPKKVTKD 199

The following BLAST results are available for this feature:

BLAST of PI0013298 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013298 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAP7	6.5e-26	53.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UFG4	2.8e-21	55.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BEA4	4.8e-21	54.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TGV6	8.8e-15	45.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V6C0	5.7e-14	42.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0013298 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047718.1	1.3e-25	53.04	hypothetical protein E6C27_scaffold115G002320 [Cucumis melo var. makuwa] >TYK083...	[more]
KAA0053237.1	5.9e-21	55.56	hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]	[more]
TYJ97633.1	1.0e-20	54.63	hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa]	[more]
KAA0040817.1	1.8e-14	45.65	hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa] >TYK1779...	[more]
KAA0063168.1	1.2e-13	42.27	hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa]	[more]

BLAST of PI0013298 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013298.1	PI0013298.1	mRNA