PI0013288 (gene) Melon (PI 482460) v1

Overview


Name	PI0013288
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Polyprotein
Location	chr08: 701198 .. 701605 (+)
RNA-Seq Expression	PI0013288
Synteny	PI0013288

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTTTAAGTTACTCTCTAAACTCTCTCCTCAGTCACAAACAATATTTGATACTACTGCTTCTTCTTCTTCCTCTATCATCTTTTCAAACTCCACCAAATCAAAAGATGATCTTTCAAAGGCACTAGCCAAACACAACATAGTTGAAGCTCATCTAGCTAATGTCGAAGATCATCTCAAAAATTGGTCTATCCCAAAGCTATATCCAAATCAAGTATACAAAATCAATTATTTCAATTTTTCTCAAAAAGACGTTATTGTCATCGCCGAAGAAAACGTAGCTATGATGGATGTATTTACAGAAATTAACCTTCTTCCAGAAGAGACTCTCCTCCTCTGAGCAAGAGAAAAGTTTAAATACCTCCACATCGGATGTGTTCAAGTTGCCTTGAAACCTTTGCTCTAA

mRNA sequence

ATGCTTTTTAAGTTACTCTCTAAACTCTCTCCTCAGTCACAAACAATATTTGATACTACTGCTTCTTCTTCTTCCTCTATCATCTTTTCAAACTCCACCAAATCAAAAGATGATCTTTCAAAGGCACTAGCCAAACACAACATAGTTGAAGCTCATCTAGCTAATGTCGAAGATCATCTCAAAAATTGGTCTATCCCAAAGCTATATCCAAATCAAGTATACAAAATCAATTATTTCAATTTTTCTCAAAAAGACGTTATTGTCATCGCCGAAGAAAACGTAGCTATGATGGATTTTAAATACCTCCACATCGGATGTGTTCAAGTTGCCTTGAAACCTTTGCTCTAA

Coding sequence (CDS)

ATGCTTTTTAAGTTACTCTCTAAACTCTCTCCTCAGTCACAAACAATATTTGATACTACTGCTTCTTCTTCTTCCTCTATCATCTTTTCAAACTCCACCAAATCAAAAGATGATCTTTCAAAGGCACTAGCCAAACACAACATAGTTGAAGCTCATCTAGCTAATGTCGAAGATCATCTCAAAAATTGGTCTATCCCAAAGCTATATCCAAATCAAGTATACAAAATCAATTATTTCAATTTTTCTCAAAAAGACGTTATTGTCATCGCCGAAGAAAACGTAGCTATGATGGATTTTAAATACCTCCACATCGGATGTGTTCAAGTTGCCTTGAAACCTTTGCTCTAA

Protein sequence

MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHLKNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMDFKYLHIGCVQVALKPLL

Homology

[Close]

BLAST of PI0013288 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.5e-32
Identity = 88/133 (66.17%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           ML KLLSKLSP S TI D TASSS S + SNS +S+DDLS ALAKHN  EAHLA VE+ L
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSLSSNS-RSQDDLSTALAKHNTAEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPKL  +QVYKIN FNFSQ+D+IVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKY 120

[Close]

BLAST of PI0013288 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.5e-32
Identity = 88/133 (66.17%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           ML KLLSKLSP S TI D TASSS S + SNS +S+DDLS ALAKHN  EAHLA VE+ L
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSLSSNS-RSQDDLSTALAKHNTAEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPKL  +QVYKIN FNFSQ+D+IVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKY 120

[Close]

BLAST of PI0013288 vs. ExPASy TrEMBL
Match: A0A5A7VKK8 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002180 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-32
Identity = 86/133 (64.66%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           M+ KLLSKLSP S +I DTT+SSS S   S + +S+DDLSKALA+HN VEAHLA VE+ L
Sbjct: 1   MISKLLSKLSPHSPSIVDTTSSSSPS---SKTPRSRDDLSKALAEHNSVEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPK+ P+QVYKIN FNFSQ+DVIVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKIDPSQVYKINTFNFSQQDVIVIPEENVAMKDEFTAINLLPEETLFKVKNKFKY 120

[Close]

BLAST of PI0013288 vs. ExPASy TrEMBL
Match: A0A5D3BN76 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75441G00050 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-32
Identity = 86/133 (64.66%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           M+ KLLSKLSP S +I DTT+SSS S   S + +S+DDLSKALA+HN VEAHLA VE+ L
Sbjct: 1   MISKLLSKLSPHSPSIVDTTSSSSPS---SKTPRSRDDLSKALAEHNSVEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPK+ P+QVYKIN FNFSQ+DVIVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKIDPSQVYKINTFNFSQQDVIVIPEENVAMKDEFTAINLLPEETLFKVKNKFKY 120

[Close]

BLAST of PI0013288 vs. ExPASy TrEMBL
Match: A0A5A7T8S7 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22487G00010 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.6e-32
Identity = 86/133 (64.66%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           ML KLLSKLSP S TI D TASSS S    ++ +SK+DLS ALA+HN  EAHLA VE+ L
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPKL  NQVYKIN FNFSQ+DVIVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLLPEETLFKVRDRFKY 120

[Close]

BLAST of PI0013288 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 3.1e-32
Identity = 88/133 (66.17%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           ML KLLSKLSP S TI D TASSS S + SNS +S+DDLS ALAKHN  EAHLA VE+ L
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSLSSNS-RSQDDLSTALAKHNTAEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPKL  +QVYKIN FNFSQ+D+IVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKY 120

[Close]

BLAST of PI0013288 vs. NCBI nr
Match: KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 3.1e-32
Identity = 88/133 (66.17%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           ML KLLSKLSP S TI D TASSS S + SNS +S+DDLS ALAKHN  EAHLA VE+ L
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSLSSNS-RSQDDLSTALAKHNTAEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPKL  +QVYKIN FNFSQ+D+IVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKY 120

[Close]

BLAST of PI0013288 vs. NCBI nr
Match: TYK01213.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 9.1e-32
Identity = 86/133 (64.66%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           M+ KLLSKLSP S +I DTT+SSS S   S + +S+DDLSKALA+HN VEAHLA VE+ L
Sbjct: 1   MISKLLSKLSPHSPSIVDTTSSSSPS---SKTPRSRDDLSKALAEHNSVEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPK+ P+QVYKIN FNFSQ+DVIVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKIDPSQVYKINTFNFSQQDVIVIPEENVAMKDEFTAINLLPEETLFKVKNKFKY 120

[Close]

BLAST of PI0013288 vs. NCBI nr
Match: KAA0066201.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 9.1e-32
Identity = 86/133 (64.66%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           M+ KLLSKLSP S +I DTT+SSS S   S + +S+DDLSKALA+HN VEAHLA VE+ L
Sbjct: 1   MISKLLSKLSPHSPSIVDTTSSSSPS---SKTPRSRDDLSKALAEHNSVEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPK+ P+QVYKIN FNFSQ+DVIVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKIDPSQVYKINTFNFSQQDVIVIPEENVAMKDEFTAINLLPEETLFKVKNKFKY 120

[Close]

BLAST of PI0013288 vs. NCBI nr
Match: KAA0037875.1 (polyprotein [Cucumis melo var. makuwa] >TYK16867.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.6e-31
Identity = 86/133 (64.66%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 1   MLFKLLSKLSPQSQTIFDTTASSSSSIIFSNSTKSKDDLSKALAKHNIVEAHLANVEDHL 60
           ML KLLSKLSP S TI D TASSS S    ++ +SK+DLS ALA+HN  EAHLA VE+ L
Sbjct: 1   MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61  KNWSIPKLYPNQVYKINYFNFSQKDVIVIAEENVAMMD-------------------FKY 115
           KNWSIPKL  NQVYKIN FNFSQ+DVIVI EENVAM D                   FKY
Sbjct: 61  KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLLPEETLFKVRDRFKY 120

The following BLAST results are available for this feature:

BLAST of PI0013288 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013288 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BG41	1.5e-32	66.17	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5A7UF59	1.5e-32	66.17	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5A7VKK8	4.4e-32	64.66	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5D3BN76	4.4e-32	64.66	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75...	[more]
A0A5A7T8S7	7.6e-32	64.66	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22487G00010 ...	[more]

BLAST of PI0013288 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98087.1	3.1e-32	66.17	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0052109.1	3.1e-32	66.17	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYK01213.1	9.1e-32	64.66	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0066201.1	9.1e-32	64.66	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0037875.1	1.6e-31	64.66	polyprotein [Cucumis melo var. makuwa] >TYK16867.1 polyprotein [Cucumis melo var...	[more]

BLAST of PI0013288 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013288.1	PI0013288.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding
molecular_function	GO:0016787	hydrolase activity