PI0013237 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAGAAGTTCCACTCAAAGCCCTAAACCTCGCGAGAGAGAAACCTTCCGAGTTCCGATGGCTACCACCAACAACCTCCATGGCTCTGGTACTCCTCTTTCTTTTATGCTTCCTTCATTTTTTTTTTCTATTTCTTCCTCTTTTTTCTGTTTTTTCTCATCTAACCAGAATTGTTTGATTGTGATTCGAATTCACATCCAGCAAGTTATTTAAGATGTATGCATTTTCTTACTCTTCGTGGCATTGTAATTCTCTTTGAGTTAAAATTTCCATTGTTTGCTGAAGACTAAGAAGCGTATTGAGGGGTTCTAGTTTTAAAATTTCATTGTGGGGTTAATTTTCCATATAGTGTAGGCATCAAAGATTTGCGATATTTGAAGGTGGCCAGGTGGGTGCAGAAAATAACCTTCCTATGCCCTCTTTATGAAAACATTTTTTTTGCTATATAAATTCAAACCCGGGTGAATTTTATCTGTTTTCGAACGTATAATTGTGTCCAGGCCTTCACTATCGTCTAACCTATAAACTAAAATGTGTAATTTTGGTAATTTCCTTCTTTTCAAACCTTGCTGCTTAAATTTCACAACTACATCTTGTTAACTGTTTTCGTTTTTACAGTACTTTCTCATACAGGATTCCTTCAATTCTCAGTGTTTTATTTGACGTCCAAACCTCTAGGCATTTTTCATTTTTTCTTGTTTTGACCTTCGGAATTCTGTTTTTGATCTGTACTGAGATGTGGAATTTATATTTTGAAGATCATTCCTCTATGGGTAAAGATTATTTGAGTGAACAAAAGGCGTTTGTTACTTGAAATAATGGAAGGGAGAGTCTTTCTATTGATTGGCGTTTTATCATCTTTTGTTGGCTTCTGGTTATCTTTATTTGCTGGACTATGTTAAGTGTTTAATCTCCATTAATATTCTTACCTCACTTAATTGTCAAATCATTAGTTGATCCTCCTTACTCAAGTATTGGTTCATGTATAGTAACATCTCATGCAAGGTTTCAGCTTTTCCTATTTTTCCTTGAAGGTTGAGTTTTTCCACATAATATGTCAGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTCATATGAGTTCAGAGGGAAAGACTAATGACACAGGTAAGAATAGGTAGTGCGGACTTGATGTCCTTTATTGTTTCTTGTTTAATTCTTTTCCTTAACATAGATTTTTTGCTTTTAACGTTAAATGTGCATTAAGAGGTATGATGCTATTCTTCTTTATCACTGTAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCTAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATGTAAAAATTCACATTCTGCTCTTGCATAACGAGGCGGCTTAAAATATAGGAAATATATCTCTTACTTTTTCTCTCCCCATCTCCCCTGTGTCTAGAATTGGATGGCATATCTTGGTATGGCGTCAAAGAAACCTCAGGAAAAAGATATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCGAAGATGCTTGCTGCTACTGCACTCTCAGCTGTTAGGGATGCTACAGCAACCATTTCTGGCAGGGGGAAAGTTGAGGTGCCAATACTTTCATCACTATTTTTCATTTGTTTTCTACTCTTTTAGATGTGAATTGTGATTATCTAGGCATTTGTTTTTTTTATTGCTATGGCATATAGAGCTGAAAATAGTTTCTCCAGTTAGATTGGATAGTTTAGAGAATTCCTTTGTTGTTGGGATGGAAGGAGAACATCCTTCTGCAATGATGGTGGGTAGGTTTGAAATACTCTTCTTCTTCAGTGTCTGTCTATCTCACTCTCTCTGTCCTTTATTTGGTGATTTCTCCACACAAAAAAAAGGTCTTGGTCTTTGATGCTTGGGAAGAAGAAACTCATCCTTGGGGAATGGGTGTGAGGAGAAGCTTACGTAAGGAGGAAAATAGATAGGAGCTGTACTTGACTTGGTTGATGAGATGAATCAAGGAAAAATAAAAGAGTTTAGAAGGTTGATCCATCTACAACATTATTTTTTAAATTTCCAGTGAAGCTTCATTGCTGAAGGCCAGTACATGCTGGAAACTGAATTTTTTGGTGAAGAAGTAATTGTTTTACTGTGGATACTACAATTTGATGGCATTTACATTACAACAAGTGAGTTGCAGAAAAGGTGTCCCCTGTTGCTTTTAAGAAAAAAGAGAAGAAAAAGGGTCATCTGTTGCTTTAAGCTTCCTACTGCCTTCTTTGCATAAAGGCAGGGGAAGGTCAAGCGTATTTGTCTTTTTGATGTTCCTATTGCTAAAAGGCTGTTGGGCTAATCCTCTTATATGTTTTGGTTTCTCATAGCGTCATAGCTGTTGGACAAATGTCCTGTAGGGGGTAACATTCGGAGTGTGAAGCTCAAAACCAAAGTTAAATTGTTATGGCTTAATGCCACTAGGGCAATCATTGGGAGGATGTGCTTCAAAAAAAATCAAATTGGAGAAGTTTTTGGGAGAGAATGTATATTATTACAAACTGCCAGGCCTCTTCTTGGTGTGGCTTGTCTACCATATTTTGCACCTATACCTCCCATTTAATTTAATTTTAGTTTTTGGGGGCTTGTGTGGGAGGGGATGTATGGGAGAGTTCTCCAAGAGGTTGATAGTTCTGATATTTCAGAACTGTATTTGATTTGTGCAAACTTGCCCCCAATCAGATTGTGTGGTTTCTATCCTCTTTCATTTCATTTTACAATACCATTTCTTGTAAAACAGTGAAACATCAAGTTTAGGCATTGATTATATTGATCGGTTAGTTGATGAACTCAAACCGTTGTCTTTTTACTTTTGACAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTTGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTCTGCAGCGAACCGATTACAGGGAGTTCGAACGAGAGAGGGATGCACGATTGGCTGTGCAGGCCAGACGAAGGCCTGATATGCGAGAGGAGCCATAATTAAAGTCATCATCCGAAGCTCTTTGAAGAATGTGCCCTTATTTTTTAATGTTCTGAGAATTTTCTTGTGCCCTAACTGGCGTCTGCTCTCAAAGTCTTGAACCTCCATCAGAAAAAATTCCTGTGGCGCGTTTTTCATTCTTCTGTTGTGTATAGATAAATCTTCGAGCTTCGGTTATTAATATTATTCATTTGGGTTAAATACAAGATTCTCAGACCACATTGTTGTCCAA CTCAGAAGTTCCACTCAAAGCCCTAAACCTCGCGAGAGAGAAACCTTCCGAGTTCCGATGGCTACCACCAACAACCTCCATGGCTCTGGTTGAGTTTTTCCACATAATATGTCAGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTCATATGAGTTCAGAGGGAAAGACTAATGACACAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCTAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATAATTGGATGGCATATCTTGGTATGGCGTCAAAGAAACCTCAGGAAAAAGATATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCGAAGATGCTTGCTGCTACTGCACTCTCAGCTGTTAGGGATGCTACAGCAACCATTTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTTGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTCTGCAGCGAACCGATTACAGGGAGTTCGAACGAGAGAGGGATGCACGATTGGCTGTGCAGGCCAGACGAAGGCCTGATATGCGAGAGGAGCCATAATTAAAGTCATCATCCGAAGCTCTTTGAAGAATGTGCCCTTATTTTTTAATGTTCTGAGAATTTTCTTGTGCCCTAACTGGCGTCTGCTCTCAAAGTCTTGAACCTCCATCAGAAAAAATTCCTGTGGCGCGTTTTTCATTCTTCTGTTGTGTATAGATAAATCTTCGAGCTTCGGTTATTAATATTATTCATTTGGGTTAAATACAAGATTCTCAGACCACATTGTTGTCCAA ATGTCAGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTCATATGAGTTCAGAGGGAAAGACTAATGACACAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCTAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATAATTGGATGGCATATCTTGGTATGGCGTCAAAGAAACCTCAGGAAAAAGATATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCGAAGATGCTTGCTGCTACTGCACTCTCAGCTGTTAGGGATGCTACAGCAACCATTTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTTGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTCTGCAGCGAACCGATTACAGGGAGTTCGAACGAGAGAGGGATGCACGATTGGCTGTGCAGGCCAGACGAAGGCCTGATATGCGAGAGGAGCCATAA MSDSVNEVLMESAKEGSAHMSSEGKTNDTEIKARVDSMWEQMNKGVSSKTLKGLSTKRSPAVNKNSKKPSNNWMAYLGMASKKPQEKDILSEGSKVLQNSSIDDAKMLAATALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAHEKMKAPATSAVDVVLEQIKKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRTDYREFERERDARLAVQARRRPDMREEP Homology
BLAST of PI0013237 vs. ExPASy Swiss-Prot
Match: Q75QI0 (Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12 Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy Swiss-Prot
Match: O88271 (Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.2e-12 Identity = 66/202 (32.67%), Postives = 102/202 (50.50%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy Swiss-Prot
Match: Q9UEE9 (Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.7e-12 Identity = 78/256 (30.47%), Postives = 123/256 (48.05%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy Swiss-Prot
Match: Q75UQ2 (Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 6.3e-12 Identity = 67/199 (33.67%), Postives = 97/199 (48.74%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy Swiss-Prot
Match: Q60FC2 (Craniofacial development protein 1 OS=Tragulus javanicus OX=9849 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11 Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy TrEMBL
Match: A0A5D3BUX3 (Craniofacial development protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00590 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 1.5e-125 Identity = 247/251 (98.41%), Postives = 250/251 (99.60%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy TrEMBL
Match: A0A1S3C8V1 (LOW QUALITY PROTEIN: craniofacial development protein 1 OS=Cucumis melo OX=3656 GN=LOC103497769 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.2e-124 Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy TrEMBL
Match: A0A0A0K9U3 (BCNT-C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00090 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 1.4e-123 Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy TrEMBL
Match: A0A6J1H4U3 (craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 3.4e-117 Identity = 234/252 (92.86%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of PI0013237 vs. ExPASy TrEMBL
Match: A0A6J1KYB0 (craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 8.3e-116 Identity = 231/252 (91.67%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of PI0013237 vs. NCBI nr
Match: TYK02974.1 (craniofacial development protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 458.8 bits (1179), Expect = 3.1e-125 Identity = 247/251 (98.41%), Postives = 250/251 (99.60%), Query Frame = 0
BLAST of PI0013237 vs. NCBI nr
Match: XP_008458319.1 (PREDICTED: LOW QUALITY PROTEIN: craniofacial development protein 1 [Cucumis melo]) HSP 1 Score: 454.9 bits (1169), Expect = 4.5e-124 Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of PI0013237 vs. NCBI nr
Match: XP_004138528.1 (craniofacial development protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 454.1 bits (1167), Expect = 7.6e-124 Identity = 246/251 (98.01%), Postives = 249/251 (99.20%), Query Frame = 0
BLAST of PI0013237 vs. NCBI nr
Match: XP_004138527.1 (craniofacial development protein 1 isoform X1 [Cucumis sativus] >KGN45609.1 hypothetical protein Csa_004824 [Cucumis sativus]) HSP 1 Score: 452.2 bits (1162), Expect = 2.9e-123 Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of PI0013237 vs. NCBI nr
Match: XP_038906899.1 (craniofacial development protein 1 isoform X2 [Benincasa hispida]) HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-118 Identity = 235/251 (93.63%), Postives = 243/251 (96.81%), Query Frame = 0
BLAST of PI0013237 vs. TAIR 10
Match: AT5G30490.1 (CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). ) HSP 1 Score: 211.8 bits (538), Expect = 6.1e-55 Identity = 125/238 (52.52%), Postives = 170/238 (71.43%), Query Frame = 0
BLAST of PI0013237 vs. TAIR 10
Match: AT5G30490.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). ) HSP 1 Score: 211.8 bits (538), Expect = 6.1e-55 Identity = 125/238 (52.52%), Postives = 170/238 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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