PI0013223 (gene) Melon (PI 482460) v1

Overview


Name	PI0013223
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Homeobox domain-containing protein
Location	chr12: 23480880 .. 23482286 (+)
RNA-Seq Expression	PI0013223
Synteny	PI0013223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGCGGAGATGGGCGGCGGAGGTGGTGGTGGTACTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATATTGGAAAATTTATATAGACAAGGAGTGAGAACGCCAAGTGCTGATCAAATACAACAAATAACGGTTAGGCTTAAGGATTATGGTCATATCGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAACATCATCATCATCATTATAATTCCTCTTTCCCTTTTTTTAATCACTTCCTTCACTTCAATCACAACAACTCTCCTTTCCCTCCTCCTCCTCCTCCCAATAATGGTTTGTCTAATGCTCATCTCCCTAATACACTCTAGCTATACATCTGTTGAGTTAGGCTCATTTTTAGATCTTTTGTTAGTTACGTTCATGGTCTAGTGTTTTCTTTTCTTTTTATTTGACCCAAAAAGGAAAAAGGTTCAAATTTTTTAGTTTTCTTTTTCTTTCCATGTCAAAACATATATTTTCATACTCAAAACATCTCAAAACCCTTTTCTTTTTCTTTTCCATTTGATCTCTTTCAAACTATGTGATATTGATTGATAAGGTTGTTAAGAAATTAAATTCACACCTAACCCCCATTAGGCTAAATTTTGTTGGGTTTAATTCTAATCTCAACTTCATTTTAGGTTTTTGTTTGATAAATATTTTATTTTTGGAAATTTTAGGTTTCTAATTTCGTTTACTCTTTTTAAACGAAGTATTTGAATTCTGAGTAAAATTTCAAACACAATACAAAATATTTAATACTATTCGTTTTAGTTTGTAGAATTTGGAATAAATTTTTGAAAACATGGGTTGGATTAGAAAGTTGCGATCATAAGCTTAATTTCCAAAAACTAAAATTCAAGACATTTCTAGAATATAGTAATTTTATTTGTTGATTATCTTAAGCTTTTTTTTTTTTTTTTGTTATGTACAATTGTAATGAAATTATTTTCGACTAATATGAAATTTTCTTGTTTTTGTTCATTATTATTATGATGATCAGTGGTTTGCAGCCCATACTACGTAAATCAAAACGACGTCGGATTATATCCACAATACCAAAACAATTCAACGGTGATTCAAAGCAGTGGGATTGTGAAGAAAAGATCAAAAAGTGAGAGAAGAAATTGTATTATTAATATCAATGAGGAATCAACCATCAATAATAATAACCTTAGCAATCAAACTACTGAAACTCTCTCCCTCTTTCCCACGCACCCAACTGGGATTTACAAGCCGGCCCAACGTTGCCACCGCCACCAACACCGACGATGGTGCCCGCTTCGGCCTCTGATGGAATTTCTGTCGACGATTCTGCCAGTGGCCGTCGACCTTACTTTGAATTTTTTATGTAG

mRNA sequence

ATGACGGCGGAGATGGGCGGCGGAGGTGGTGGTGGTACTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATATTGGAAAATTTATATAGACAAGGAGTGAGAACGCCAAGTGCTGATCAAATACAACAAATAACGGTTAGGCTTAAGGATTATGGTCATATCGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAACATCATCATCATCATTATAATTCCTCTTTCCCTTTTTTTAATCACTTCCTTCACTTCAATCACAACAACTCTCCTTTCCCTCCTCCTCCTCCTCCCAATAATGTGGTTTGCAGCCCATACTACGTAAATCAAAACGACGTCGGATTATATCCACAATACCAAAACAATTCAACGGTGATTCAAAGCAGTGGGATTGTGAAGAAAAGATCAAAAAGTGAGAGAAGAAATTGTATTATTAATATCAATGAGGAATCAACCATCAATAATAATAACCTTACCGGCCCAACGTTGCCACCGCCACCAACACCGACGATGGTGCCCGCTTCGGCCTCTGATGGAATTTCTGTCGACGATTCTGCCAGTGGCCGTCGACCTTACTTTGAATTTTTTATGTAG

Coding sequence (CDS)

ATGACGGCGGAGATGGGCGGCGGAGGTGGTGGTGGTACTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATATTGGAAAATTTATATAGACAAGGAGTGAGAACGCCAAGTGCTGATCAAATACAACAAATAACGGTTAGGCTTAAGGATTATGGTCATATCGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAACATCATCATCATCATTATAATTCCTCTTTCCCTTTTTTTAATCACTTCCTTCACTTCAATCACAACAACTCTCCTTTCCCTCCTCCTCCTCCTCCCAATAATGTGGTTTGCAGCCCATACTACGTAAATCAAAACGACGTCGGATTATATCCACAATACCAAAACAATTCAACGGTGATTCAAAGCAGTGGGATTGTGAAGAAAAGATCAAAAAGTGAGAGAAGAAATTGTATTATTAATATCAATGAGGAATCAACCATCAATAATAATAACCTTACCGGCCCAACGTTGCCACCGCCACCAACACCGACGATGGTGCCCGCTTCGGCCTCTGATGGAATTTCTGTCGACGATTCTGCCAGTGGCCGTCGACCTTACTTTGAATTTTTTATGTAG

Protein sequence

MTAEMGGGGGGGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVCSPYYVNQNDVGLYPQYQNNSTVIQSSGIVKKRSKSERRNCIININEESTINNNNLTGPTLPPPPTPTMVPASASDGISVDDSASGRRPYFEFFM

Homology

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BLAST of PI0013223 vs. ExPASy Swiss-Prot
Match: Q6X7K1 (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-32
Identity = 75/115 (65.22%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 12  GTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHK 71
           GT  SSRWNPTK+QI++LENLY++G+RTPSADQIQQIT RL+ YGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 72  ARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVC-SPYYVNQ 126
           ARQRQKQKQ+           +FN  L   H  S F  PPP +NV C SPYY+ Q
Sbjct: 68  ARQRQKQKQER--------MAYFNRLL---HKTSRFFYPPPCSNVGCVSPYYLQQ 111

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BLAST of PI0013223 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-23
Identity = 93/248 (37.50%), Postives = 122/248 (49.19%), Query Frame = 0


Query: 2   TAEMGGGGGG------------GTPVS-----------SRWNPTKEQISILENLYRQGVR 61
           T  +GGGGGG              P+S           +RW PTKEQI++LE LYRQG+R
Sbjct: 5   TTTLGGGGGGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGLR 64

Query: 62  TPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHYNSSFPFFNHF- 121
           TP+A+QIQQIT RL+++GHIEGKNVFYWFQNHKARQRQKQKQQ        SF +F+   
Sbjct: 65  TPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQ--------SFDYFSKLF 124

Query: 122 --------LH------FNHNNSP--FPPPPPP----NNVVCSPYYVNQNDVGLYPQYQNN 181
                   LH      F    +P   PPPPPP        C+   V        P   NN
Sbjct: 125 RRPPPLPVLHRPLARPFPLAMAPTAMPPPPPPPATTTTAACNAGGVMFRTPSFMPVATNN 184

Query: 182 STVIQSSGIVKKRSKSERRNCIININEESTINNNNLTGPTLPPPPTPTMVPASASDGISV 206
                +S   ++++        +  +++ST      T   L  PP+   + A+A  G + 
Sbjct: 185 -----ASYYPQQQTPLLYPGMEVCPHDKSTAQPPATTTMYLQAPPSSAHLAAAAGRG-AA 238

[Close]

BLAST of PI0013223 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-23
Identity = 93/248 (37.50%), Postives = 122/248 (49.19%), Query Frame = 0


Query: 2   TAEMGGGGGG------------GTPVS-----------SRWNPTKEQISILENLYRQGVR 61
           T  +GGGGGG              P+S           +RW PTKEQI++LE LYRQG+R
Sbjct: 5   TTTLGGGGGGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGLR 64

Query: 62  TPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHYNSSFPFFNHF- 121
           TP+A+QIQQIT RL+++GHIEGKNVFYWFQNHKARQRQKQKQQ        SF +F+   
Sbjct: 65  TPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQ--------SFDYFSKLF 124

Query: 122 --------LH------FNHNNSP--FPPPPPP----NNVVCSPYYVNQNDVGLYPQYQNN 181
                   LH      F    +P   PPPPPP        C+   V        P   NN
Sbjct: 125 RRPPPLPVLHRPLARPFPLAMAPTAMPPPPPPPATTTTAACNAGGVMFRTPSFMPVATNN 184

Query: 182 STVIQSSGIVKKRSKSERRNCIININEESTINNNNLTGPTLPPPPTPTMVPASASDGISV 206
                +S   ++++        +  +++ST      T   L  PP+   + A+A  G + 
Sbjct: 185 -----ASYYPQQQTPLLYPGMEVCPHDKSTAQPPATTTMYLQAPPSSAHLAAAAGRG-AA 238

[Close]

BLAST of PI0013223 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-22
Identity = 51/72 (70.83%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 15  VSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQ 74
           VSSRWNPT +Q+ +LE LYRQG RTPSAD IQQIT +L+ YG IEGKNVFYWFQNHKAR+
Sbjct: 73  VSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARE 132

Query: 75  RQKQKQQHHHHH 87
           RQK+++Q    H
Sbjct: 133 RQKRRRQMETGH 144

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BLAST of PI0013223 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-21
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 14  PVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKAR 73
           P  +RWNPT+EQI ILE LY+ G+RTP+A QI+ IT++L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 74  QRQKQKQQH 83
           +RQKQK+ +
Sbjct: 146 ERQKQKRNN 154

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BLAST of PI0013223 vs. ExPASy TrEMBL
Match: A0A0A0LVA9 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.3e-97
Identity = 193/239 (80.75%), Postives = 200/239 (83.68%), Query Frame = 0


Query: 1   MTAEMG------GGGGGGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60
           MTAE+G      GGGGGG PVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD
Sbjct: 1   MTAEVGDGGGGVGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60

Query: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPF---PPPP 120
           YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHH+NSSFPFFNHFLHFNHNNSPF   PPPP
Sbjct: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHFNSSFPFFNHFLHFNHNNSPFPPPPPPP 120

Query: 121 PPNNVVCSPYYVNQNDVGLYPQYQNNSTVIQSSGIVKKRSKSERRNCIININEESTINNN 180
           PPNNVVCSPYYV+QNDVGLYPQYQNNS VIQS GI  KRSKSERRNCIININEESTIN+N
Sbjct: 121 PPNNVVCSPYYVHQNDVGLYPQYQNNSMVIQSGGIETKRSKSERRNCIININEESTINDN 180

Query: 181 NLT---------GPTLP---------PPPTPTMVPASASDGISVDDSASGRRPYFEFFM 213
           NL+          PT P          PP P+MVP SASD ISVDDSA GR+PYFEFFM
Sbjct: 181 NLSYQTTETLSLFPTHPTGDLQASPQSPPPPSMVPTSASDEISVDDSAHGRQPYFEFFM 239

[Close]

BLAST of PI0013223 vs. ExPASy TrEMBL
Match: A0A6J1E0T1 (WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 3.2e-52
Identity = 125/211 (59.24%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 11  GGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 70
           GG P SSRWNPTKEQI ILENLY+QGVRTPSADQI +IT  LK YGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWFQNH 71

Query: 71  KARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVCSPYYVNQNDVGL 130
           KARQRQKQKQQ        S   F+HFLHFN N  P+  P    NV CSPYYV+QNDVGL
Sbjct: 72  KARQRQKQKQQ--------SLALFSHFLHFNSN--PYSSP----NVGCSPYYVHQNDVGL 131

Query: 131 YPQYQNNSTVIQSSGIVKKRSKSERRN-------CIININEESTINNNNLTGPT--LPPP 190
           YP Y NNS  +QSSGI ++RSKSERRN         IN+N ++   +   T PT  L   
Sbjct: 132 YPPYHNNSKALQSSGIARRRSKSERRNSNGEIEVSAINLNIQTETLSLFPTHPTGDLQVG 191

Query: 191 PTPTMVPASASDGISVDDSASGRRPYFEFFM 213
           P P     +++D  S   S+SGR  YF+FF+
Sbjct: 192 PLPPTSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]

BLAST of PI0013223 vs. ExPASy TrEMBL
Match: A0A6J1KD41 (WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 7.9e-51
Identity = 127/223 (56.95%), Postives = 145/223 (65.02%), Query Frame = 0


Query: 11  GGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 70
           GGTPVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT RLK YGHIEGKNVFYWFQNH
Sbjct: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67

Query: 71  KARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVCSPYYVNQNDVGL 130
           KARQRQKQKQ H      ++  +FNHFL       PF P  P  NVVCSPYYV+QN+VG+
Sbjct: 68  KARQRQKQKQDH-----TATLAYFNHFLPL----PPFAPHFPSPNVVCSPYYVHQNNVGV 127

Query: 131 YPQYQNNSTVIQSSGIVKKRSKSERRNCIIN--INEESTINNNNLTG-----PTL----- 190
           YP  Q+NST         +RS SERR+C  N     +S   +N  T      PT      
Sbjct: 128 YPHQQSNSTT--------RRSNSERRSCTNNPGFGYQSCQTDNPATQTLPLFPTHPTGDL 187

Query: 191 ---PPPPTP------TMVPASASDGISVDDSASGRRPYFEFFM 213
              PPPP+P          AS+S G+S D+S+ G R YFEFF+
Sbjct: 188 QVGPPPPSPLPPQAMASASASSSSGMSADESSGGCRTYFEFFL 213

[Close]

BLAST of PI0013223 vs. ExPASy TrEMBL
Match: A0A5J5C598 (Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000934 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.8e-40
Identity = 115/244 (47.13%), Postives = 140/244 (57.38%), Query Frame = 0


Query: 11  GGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 70
           GG P SSRWNPTKEQIS+LENLYRQG+RTPSA+QIQQIT RLK YGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQISMLENLYRQGIRTPSAEQIQQITSRLKAYGHIEGKNVFYWFQNH 71

Query: 71  KARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVCSPYYVNQNDVGL 130
           KARQRQKQKQ+        +  +++ +L   HN+SP  PP P   VVCSPYY+ QND+G 
Sbjct: 72  KARQRQKQKQE--------NMAYYSRYL---HNSSPVFPPCP--TVVCSPYYLPQNDLGF 131

Query: 131 YPQYQNNSTVIQSSGIVKKRS--KSERRNCIINI-------------------NEESTIN 190
           YP Y     V+   GI ++ S  K E+ N  +                     NE +  N
Sbjct: 132 YPHYPK---VLLPGGIKRRPSPDKMEKTNTCVGAGYEPSHLRYNVMMHTAGDKNEAAMNN 191

Query: 191 NNNLTGPTLPP-PPTPTMV---------------------PASASDGISVDDSASGRRPY 212
           N N +  TLP  P  PT +                     P+S+SD   + +  SG +PY
Sbjct: 192 NCNTSQATLPLFPLQPTGILQARTTNNSSLVSTSAENSTTPSSSSDTTGI-EQRSGDQPY 238

[Close]

BLAST of PI0013223 vs. ExPASy TrEMBL
Match: A0A2C9VZ31 (Homeobox domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_04G033600 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 6.9e-39
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 4   EMGGGGGGGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNV 63
           +MGGG GGG  V+SRWNPTKEQI++LE+LY+QG+RTPSADQIQQIT RLKD+GHIEGKNV
Sbjct: 7   DMGGGPGGG-QVNSRWNPTKEQINLLESLYKQGIRTPSADQIQQITARLKDFGHIEGKNV 66

Query: 64  FYWFQNHKARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFP-PPPPPNNVVCSPYY 123
           FYWFQNHKARQRQKQKQ+        S  +FN +L+          P P  N VVC  YY
Sbjct: 67  FYWFQNHKARQRQKQKQE--------SLAYFNRYLYKPQQQQQLVFPRPSTNGVVCGSYY 126

Query: 124 VNQNDVGLYPQYQNNSTVIQSSGIVKKRSKSER 156
           + Q+DVG YPQY   STV+  +G  K++ +SE+
Sbjct: 127 IPQSDVGFYPQY---STVLLPAGSFKRKPRSEK 147

[Close]

BLAST of PI0013223 vs. NCBI nr
Match: KGN65708.1 (hypothetical protein Csa_019930 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 6.7e-97
Identity = 193/239 (80.75%), Postives = 200/239 (83.68%), Query Frame = 0


Query: 1   MTAEMG------GGGGGGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60
           MTAE+G      GGGGGG PVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD
Sbjct: 1   MTAEVGDGGGGVGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60

Query: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPF---PPPP 120
           YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHH+NSSFPFFNHFLHFNHNNSPF   PPPP
Sbjct: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHFNSSFPFFNHFLHFNHNNSPFPPPPPPP 120

Query: 121 PPNNVVCSPYYVNQNDVGLYPQYQNNSTVIQSSGIVKKRSKSERRNCIININEESTINNN 180
           PPNNVVCSPYYV+QNDVGLYPQYQNNS VIQS GI  KRSKSERRNCIININEESTIN+N
Sbjct: 121 PPNNVVCSPYYVHQNDVGLYPQYQNNSMVIQSGGIETKRSKSERRNCIININEESTINDN 180

Query: 181 NLT---------GPTLP---------PPPTPTMVPASASDGISVDDSASGRRPYFEFFM 213
           NL+          PT P          PP P+MVP SASD ISVDDSA GR+PYFEFFM
Sbjct: 181 NLSYQTTETLSLFPTHPTGDLQASPQSPPPPSMVPTSASDEISVDDSAHGRQPYFEFFM 239

[Close]

BLAST of PI0013223 vs. NCBI nr
Match: XP_031742465.1 (WUSCHEL-related homeobox 2 [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 5.8e-56
Identity = 138/236 (58.47%), Postives = 144/236 (61.02%), Query Frame = 0


Query: 1   MTAEMG------GGGGGGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60
           MTAE+G      GGGGGG PVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD
Sbjct: 1   MTAEVGDGGGGVGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60

Query: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPN 120
           YGHIE                                                       
Sbjct: 61  YGHIE------------------------------------------------------- 120

Query: 121 NVVCSPYYVNQNDVGLYPQYQNNSTVIQSSGIVKKRSKSERRNCIININEESTINNNNLT 180
            VVCSPYYV+QNDVGLYPQYQNNS VIQS GI  KRSKSERRNCIININEESTIN+NNL+
Sbjct: 121 -VVCSPYYVHQNDVGLYPQYQNNSMVIQSGGIETKRSKSERRNCIININEESTINDNNLS 180

Query: 181 ---------GPTLP---------PPPTPTMVPASASDGISVDDSASGRRPYFEFFM 213
                     PT P          PP P+MVP SASD ISVDDSA GR+PYFEFFM
Sbjct: 181 YQTTETLSLFPTHPTGDLQASPQSPPPPSMVPTSASDEISVDDSAHGRQPYFEFFM 180

[Close]

BLAST of PI0013223 vs. NCBI nr
Match: XP_022158904.1 (WUSCHEL-related homeobox 2 [Momordica charantia])

HSP 1 Score: 214.9 bits (546), Expect = 6.6e-52
Identity = 125/211 (59.24%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 11  GGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 70
           GG P SSRWNPTKEQI ILENLY+QGVRTPSADQI +IT  LK YGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWFQNH 71

Query: 71  KARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVCSPYYVNQNDVGL 130
           KARQRQKQKQQ        S   F+HFLHFN N  P+  P    NV CSPYYV+QNDVGL
Sbjct: 72  KARQRQKQKQQ--------SLALFSHFLHFNSN--PYSSP----NVGCSPYYVHQNDVGL 131

Query: 131 YPQYQNNSTVIQSSGIVKKRSKSERRN-------CIININEESTINNNNLTGPT--LPPP 190
           YP Y NNS  +QSSGI ++RSKSERRN         IN+N ++   +   T PT  L   
Sbjct: 132 YPPYHNNSKALQSSGIARRRSKSERRNSNGEIEVSAINLNIQTETLSLFPTHPTGDLQVG 191

Query: 191 PTPTMVPASASDGISVDDSASGRRPYFEFFM 213
           P P     +++D  S   S+SGR  YF+FF+
Sbjct: 192 PLPPTSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]

BLAST of PI0013223 vs. NCBI nr
Match: XP_022998665.1 (WUSCHEL-related homeobox 2-like [Cucurbita maxima])

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-50
Identity = 127/223 (56.95%), Postives = 145/223 (65.02%), Query Frame = 0


Query: 11  GGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 70
           GGTPVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT RLK YGHIEGKNVFYWFQNH
Sbjct: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67

Query: 71  KARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVCSPYYVNQNDVGL 130
           KARQRQKQKQ H      ++  +FNHFL       PF P  P  NVVCSPYYV+QN+VG+
Sbjct: 68  KARQRQKQKQDH-----TATLAYFNHFLPL----PPFAPHFPSPNVVCSPYYVHQNNVGV 127

Query: 131 YPQYQNNSTVIQSSGIVKKRSKSERRNCIIN--INEESTINNNNLTG-----PTL----- 190
           YP  Q+NST         +RS SERR+C  N     +S   +N  T      PT      
Sbjct: 128 YPHQQSNSTT--------RRSNSERRSCTNNPGFGYQSCQTDNPATQTLPLFPTHPTGDL 187

Query: 191 ---PPPPTP------TMVPASASDGISVDDSASGRRPYFEFFM 213
              PPPP+P          AS+S G+S D+S+ G R YFEFF+
Sbjct: 188 QVGPPPPSPLPPQAMASASASSSSGMSADESSGGCRTYFEFFL 213

[Close]

BLAST of PI0013223 vs. NCBI nr
Match: KAG6607233.1 (Inner membrane protein ALBINO3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-48
Identity = 124/223 (55.61%), Postives = 143/223 (64.13%), Query Frame = 0


Query: 11  GGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 70
           GGTPVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT RLK YGHIEGKNVFYWFQNH
Sbjct: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67

Query: 71  KARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVCSPYYVNQNDVGL 130
           KARQRQKQKQ H     +++  +FNHFL       PF P  P  NVVCSPYYV+QN+VG+
Sbjct: 68  KARQRQKQKQDH-----SATLAYFNHFLPL----PPFSPHFPSPNVVCSPYYVHQNNVGV 127

Query: 131 YPQYQNNSTVIQSSGIVKKRSKSERRNCIININEESTINNNNLTG-----PTLP------ 190
           YPQ Q+NS +              RR+       +S  N+N  T      PT P      
Sbjct: 128 YPQQQSNSKM--------------RRSHNGGFGYQSCQNDNPTTQTLSLFPTHPTGDLQA 187

Query: 191 -PPPTPTMVP---------ASASDGISVDDSASGRRPYFEFFM 213
            PPP+P+  P         ASAS G+S D+S+ G R YFEFF+
Sbjct: 188 GPPPSPSPPPPHAEAATATASASSGMSADESSGGCRTYFEFFL 207

[Close]

BLAST of PI0013223 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 139.8 bits (351), Expect = 2.5e-33
Identity = 75/115 (65.22%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 12  GTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHK 71
           GT  SSRWNPTK+QI++LENLY++G+RTPSADQIQQIT RL+ YGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 72  ARQRQKQKQQHHHHHYNSSFPFFNHFLHFNHNNSPFPPPPPPNNVVC-SPYYVNQ 126
           ARQRQKQKQ+           +FN  L   H  S F  PPP +NV C SPYY+ Q
Sbjct: 68  ARQRQKQKQER--------MAYFNRLL---HKTSRFFYPPPCSNVGCVSPYYLQQ 111

[Close]

BLAST of PI0013223 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23
Identity = 51/72 (70.83%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 15  VSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQ 74
           VSSRWNPT +Q+ +LE LYRQG RTPSAD IQQIT +L+ YG IEGKNVFYWFQNHKAR+
Sbjct: 73  VSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARE 132

Query: 75  RQKQKQQHHHHH 87
           RQK+++Q    H
Sbjct: 133 RQKRRRQMETGH 144

[Close]

BLAST of PI0013223 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 14  PVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKAR 73
           P  +RWNPT+EQI ILE LY+ G+RTP+A QI+ IT++L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 74  QRQKQKQQH 83
           +RQKQK+ +
Sbjct: 146 ERQKQKRNN 154

[Close]

BLAST of PI0013223 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 8.4e-21
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 18  RWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQK 77
           RWNPT EQI+ LE LYR G RTP+ +QIQQI  +L+ YG IEGKNVFYWFQNHKAR+R K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 78  QKQQ 82
           ++++
Sbjct: 121 RRRR 124

[Close]

BLAST of PI0013223 vs. TAIR 10
Match: AT5G05770.1 (WUSCHEL related homeobox 7 )

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-20
Identity = 44/70 (62.86%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 8  GGGGGTPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWF 67
          GGGG      RWNPT EQ+ +L +L++ G+RTPS DQIQ+I++ L  YG IE KNVFYWF
Sbjct: 19 GGGGTGAKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWF 78

Query: 68 QNHKARQRQK 78
          QNHKAR+RQK
Sbjct: 79 QNHKARERQK 88

The following BLAST results are available for this feature:

BLAST of PI0013223 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7K1	3.5e-32	65.22	WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1	[more]
A2WWU7	1.8e-23	37.50	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 S...	[more]
Q8LR86	1.8e-23	37.50	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2...	[more]
Q6X7K0	1.5e-22	70.83	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q6X7J9	3.7e-21	68.12	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]

BLAST of PI0013223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVA9	3.3e-97	80.75	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE...	[more]
A0A6J1E0T1	3.2e-52	59.24	WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 S...	[more]
A0A6J1KD41	7.9e-51	56.95	WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3...	[more]
A0A5J5C598	4.8e-40	47.13	Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000934 P...	[more]
A0A2C9VZ31	6.9e-39	60.13	Homeobox domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_04G0336...	[more]

BLAST of PI0013223 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65708.1	6.7e-97	80.75	hypothetical protein Csa_019930 [Cucumis sativus]	[more]
XP_031742465.1	5.8e-56	58.47	WUSCHEL-related homeobox 2 [Cucumis sativus]	[more]
XP_022158904.1	6.6e-52	59.24	WUSCHEL-related homeobox 2 [Momordica charantia]	[more]
XP_022998665.1	1.6e-50	56.95	WUSCHEL-related homeobox 2-like [Cucurbita maxima]	[more]
KAG6607233.1	2.0e-48	55.61	Inner membrane protein ALBINO3, chloroplastic, partial [Cucurbita argyrosperma s...	[more]

BLAST of PI0013223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59340.1	2.5e-33	65.22	WUSCHEL related homeobox 2	[more]
AT3G18010.1	1.1e-23	70.83	WUSCHEL related homeobox 1	[more]
AT1G46480.1	2.6e-22	68.12	WUSCHEL related homeobox 4	[more]
AT2G01500.1	8.4e-21	67.19	Homeodomain-like superfamily protein	[more]
AT5G05770.1	1.9e-20	62.86	WUSCHEL related homeobox 7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 14..81 e-value: 1.8E-4 score: 30.9
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 17..76 e-value: 4.8E-19 score: 68.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 12..77 score: 10.705517
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 18..72 e-value: 5.96325E-5 score: 37.6081
None	No IPR available	GENE3D	1.10.10.60		coord: 16..87 e-value: 1.0E-10 score: 43.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR45940:SF6	TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED	coord: 3..157
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 3..157
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013223.1	PI0013223.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity