PI0013209 (gene) Melon (PI 482460) v1

Overview


Name	PI0013209
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 8318123 .. 8318590 (-)
RNA-Seq Expression	PI0013209
Synteny	PI0013209

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGACTTGGTGTGTCCTGATCGTGGGGATTTGGTTAAGCCGGGTGTACGATGGAGTGAAGAGGAGCTTCGAGCTGGTGGCTGATATGGTGGAAGAGTGGAAGGAGATGATTATTGGATTCTGCGTCTCTTCAGTGATTGCGATAGCAACGGTATCTGTCCAAATCCAAACGAATCTTCCAAATTCATTTCAGCTTTTATCCATTGTTGTATTACTTTGCTTCGTGTCCGTTGGTTTTGCAAGATTGATCGGCTCAATTTACAAACCACTCTCAAAGGTTCTCTATTGTTTTGGTGGTTGCTTATGTGCGACAAGCTGTTTCATTGCTACAGCTATTCCTTATGACACACATTTTCATATCATTGTTATTGTTCTTTACTCAATCTTCTGTATCATCTTCCTCGTCGTCATCTCCATCACTCACAAAACTTCTTCATCTTCCTCTTCCAGTACCCTTCCTCTCTAA

mRNA sequence

ATGTTGACTTGGTGTGTCCTGATCGTGGGGATTTGGTTAAGCCGGGTGTACGATGGAGTGAAGAGGAGCTTCGAGCTGGTGGCTGATATGGTGGAAGAGTGGAAGGAGATGATTATTGGATTCTGCGTCTCTTCAGTGATTGCGATAGCAACGGTATCTGTCCAAATCCAAACGAATCTTCCAAATTCATTTCAGCTTTTATCCATTGTTGTATTACTTTGCTTCGTGTCCGTTGGTTTTGCAAGATTGATCGGCTCAATTTACAAACCACTCTCAAAGGTTCTCTATTGTTTTGGTGGTTGCTTATGTGCGACAAGCTGTTTCATTGCTACAGCTATTCCTTATGACACACATTTTCATATCATTGTTATTGTTCTTTACTCAATCTTCTGTATCATCTTCCTCGTCGTCATCTCCATCACTCACAAAACTTCTTCATCTTCCTCTTCCAGTACCCTTCCTCTCTAA

Coding sequence (CDS)

ATGTTGACTTGGTGTGTCCTGATCGTGGGGATTTGGTTAAGCCGGGTGTACGATGGAGTGAAGAGGAGCTTCGAGCTGGTGGCTGATATGGTGGAAGAGTGGAAGGAGATGATTATTGGATTCTGCGTCTCTTCAGTGATTGCGATAGCAACGGTATCTGTCCAAATCCAAACGAATCTTCCAAATTCATTTCAGCTTTTATCCATTGTTGTATTACTTTGCTTCGTGTCCGTTGGTTTTGCAAGATTGATCGGCTCAATTTACAAACCACTCTCAAAGGTTCTCTATTGTTTTGGTGGTTGCTTATGTGCGACAAGCTGTTTCATTGCTACAGCTATTCCTTATGACACACATTTTCATATCATTGTTATTGTTCTTTACTCAATCTTCTGTATCATCTTCCTCGTCGTCATCTCCATCACTCACAAAACTTCTTCATCTTCCTCTTCCAGTACCCTTCCTCTCTAA

Protein sequence

MLTWCVLIVGIWLSRVYDGVKRSFELVADMVEEWKEMIIGFCVSSVIAIATVSVQIQTNLPNSFQLLSIVVLLCFVSVGFARLIGSIYKPLSKVLYCFGGCLCATSCFIATAIPYDTHFHIIVIVLYSIFCIIFLVVISITHKTSSSSSSSTLPL

Homology

[Close]

BLAST of PI0013209 vs. ExPASy TrEMBL
Match: A0A0A0LCY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851175 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.1e-53
Identity = 115/155 (74.19%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   MLTWCVLIVGIWLSRVYDGVKRSFELVADMVEEWKEMIIGFCVSSVIAIATVSVQIQTNL 60
           ML  C L V +W  + Y GV+RS E+VA+MVEE KEMIIGFC+SS I IATVSVQ +T L
Sbjct: 1   MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKL 60

Query: 61  PNSFQLLSIVVLLCFVSVGFARLIGSIYKPLSKVLYCFGGCLCATSCFIATAIPYDTHFH 120
           PNSFQ LSI VL+CF+SVGFAR+I SI+K LSK+LYCFGG LCAT CFIATAIPYDTHFH
Sbjct: 61  PNSFQFLSIAVLICFLSVGFARMISSIFKTLSKILYCFGGFLCATCCFIATAIPYDTHFH 120

Query: 121 IIVIVLYSIFCIIFLVVISITHKTSSSSSSSTLPL 156
           IIVIVLYSIFCIIF+++ISITH  SS SSS TLPL
Sbjct: 121 IIVIVLYSIFCIIFVMLISITHNPSSPSSSHTLPL 155

[Close]

BLAST of PI0013209 vs. ExPASy TrEMBL
Match: A0A0A0LQP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040510 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.7e-40
Identity = 100/159 (62.89%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 1   MLTWCVLI--VGIWLSRVYDGVKRSFELVADMVEEWKEMIIGFCVSSVIAIATVSVQIQT 60
           ML WC LI  VG W  + Y G +RS E+VA+ VEE KE IIG CVSS I I T SVQI+T
Sbjct: 1   MLGWCALIVAVGAWFRQPYCGARRSLEIVAETVEERKEFIIGLCVSSAIGIVTTSVQIKT 60

Query: 61  NLPNSFQLLSIVVLLCFVSVGFARLIGSIYKPLSKVLYCFGGCLCATSCFIATAIPY-DT 120
            LPNSFQ LS+ +LLCFVSV FAR+I S+++ LS++LYC G  +CAT+CFIATAI Y D 
Sbjct: 61  KLPNSFQCLSMPILLCFVSVVFARMIESVFRTLSEILYCVGDFMCATTCFIATAISYDDA 120

Query: 121 HFHIIVIVLYSIF---CIIFLVVISITHKTSSSSSSSTL 154
           HFH IVIVLYSIF   CIIF++ ISITH   SS SSS +
Sbjct: 121 HFHTIVIVLYSIFCIICIIFIIFISITHNDPSSPSSSNI 159

[Close]

BLAST of PI0013209 vs. ExPASy TrEMBL
Match: A0A0A0LSX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040520 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.2e-37
Identity = 93/150 (62.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 7   LIVG-IWLSRVYDGVKRSFELVADMVEEWKEMIIGFCVSSVIAIATVSVQIQTNLPNSFQ 66
           LIVG +W  + Y GV+RSFE+ A+MVEEWK+MIIGFCVSS I IATVSV I+T LPNSFQ
Sbjct: 5   LIVGAVWFRQAYGGVRRSFEVAAEMVEEWKDMIIGFCVSSAIGIATVSVHIKTELPNSFQ 64

Query: 67  LLSIVVLLCFVSVGFARLIGSIYKPLSKVLYCFGGCLCATSCFIATAIPYDTHFHIIVIV 126
           LLSI VLLCFVSV FAR+I SI++ LSK+LYC GG L A+SCFIATAIPY + F      
Sbjct: 65  LLSIAVLLCFVSVVFARMINSIFETLSKILYCVGGLLYASSCFIATAIPYASSF------ 124

Query: 127 LYSIFCIIFLVVISITHKTSSSSSSSTLPL 156
                         ITH  S  SSS TLPL
Sbjct: 125 --------------ITHNPSPPSSSDTLPL 134

[Close]

BLAST of PI0013209 vs. ExPASy TrEMBL
Match: A0A0A0LQB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G041520 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.8e-28
Identity = 74/128 (57.81%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 22  RSFELVADMVEEWKEMIIGFCVSSVIAIATVSVQIQTN--LPNSFQLLSIVVLLCFVSVG 81
           R   +VA+MVEEWKEMI+  CVSS I IATVSVQI+TN  LP +FQ LSIVVLLCF  VG
Sbjct: 35  RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFVG 94

Query: 82  FARLIGSIYKPLSKVLYCFGGCLCATSCFIATAIPYDTHFHIIVIVLYSIFCIIFLVVIS 141
           FA++   I+K +SK+LYC GG L  T+ FIATAIP+  +F II+ +LY +FC IF+++ +
Sbjct: 95  FAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFILYLLFCFIFMLITT 154

Query: 142 ITHKTSSS 148
           I ++  SS
Sbjct: 155 IHNQQPSS 162

[Close]

BLAST of PI0013209 vs. ExPASy TrEMBL
Match: A0A0A0LEV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000430 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.6e-13
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 0


Query: 20  VKRSF-ELVADMVEEWKEMIIGFCVSSVIAIATVSVQIQTNLPNSFQLLSIVVLLCFVSV 79
           V  SF E+VA MVEE K  IIGF  +   AIA +SVQ +  LP+SF+ +SI  LLC +  
Sbjct: 5   VTESFVEVVAKMVEEQKIKIIGFHAAFTFAIAALSVQAKAKLPDSFEFVSITSLLCLLCF 64

Query: 80  GFARLIGSIYKPLSKVLYCFGGCLCATSCFIATAIPYDTHFHIIVIVLYSIFCIIFLVVI 139
             A +I   +K  +KVLY  G   C TS  IA AIP   +FH+++I+L+ I CI  ++++
Sbjct: 65  VSAMIIDFSFKTFAKVLYFLGAFFCMTSYLIAAAIPSQMYFHVLLILLFLISCITLVILM 124

Query: 140 SITHKTSSSSSSSTLPL 156
           S T  +  +S+++ LPL
Sbjct: 125 SNT-CSPPNSTTNDLPL 140

[Close]

BLAST of PI0013209 vs. NCBI nr
Match: KAE8652531.1 (hypothetical protein Csa_013077, partial [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-32
Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 17  YDGVKRSFELVADMVEEWKEMIIGFCVSSVIAIATVSVQIQTNLPNSFQLLSIVVLLCFV 76
           Y GV+RSFE+ A+MVEEWK+MIIGFCVSS I IATVSV I+T LPNSFQLLSI VLLCFV
Sbjct: 2   YGGVRRSFEVAAEMVEEWKDMIIGFCVSSAIGIATVSVHIKTELPNSFQLLSIAVLLCFV 61

Query: 77  SVGFARLIGSIYKPLSKVLYCFGGCLCATSCFIATAIPY 116
           SV FAR+I SI++ LSK+LYC GG L A+SCFIATAIPY
Sbjct: 62  SVVFARMINSIFETLSKILYCVGGLLYASSCFIATAIPY 100

[Close]

BLAST of PI0013209 vs. NCBI nr
Match: KGN60003.2 (hypothetical protein Csa_000735, partial [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.8e-25
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 1  MLTWCVLIVGIWLSRVYDGVKRSFELVADMVEEWKEMIIGFCVSSVIAIATVSVQIQTNL 60
          ML  C L V +W  + Y GV+RS E+VA+MVEE KEMIIGFC+SS I IATVSVQ +T L
Sbjct: 1  MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKL 60

Query: 61 PNSFQLLSIVVLLCFVSVGFARLIGSIYKPLSKVL 96
          PNSFQ LSI VL+CF+SVGFAR+I SI+K LSK+L
Sbjct: 61 PNSFQFLSIAVLICFLSVGFARMISSIFKTLSKIL 95

[Close]

BLAST of PI0013209 vs. NCBI nr
Match: KAG6572911.1 (hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 121.7 bits (304), Expect = 5.5e-24
Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 28  ADMVEEWKEMIIGFCVSSVIAIATVSVQIQTNLPNSFQLLSIVVLLCFVSVGFARLIGSI 87
           A+MVEEWK+MI+ FCVSS IAIATVSVQI+  LP  F  LS+ +LLCF  V F ++  SI
Sbjct: 37  AEMVEEWKDMIVAFCVSSAIAIATVSVQIEKKLPRVFNFLSLTLLLCFGFVAFGKMTKSI 96

Query: 88  YKPLSKVLYCFGGCLCATSCFIATAIPYDTHFHIIVIVLYSIFCIIFLVVISITHKTSSS 147
            K +S++LYC GG L  T+ FIA+AIPY ++F II+ ++Y IF ++F++V    HK+SSS
Sbjct: 97  LKRVSRILYCVGGVLGVTALFIASAIPYASYFQIIIFLIYLIFWLMFMLV---AHKSSSS 153

[Close]

BLAST of PI0013209 vs. NCBI nr
Match: KAG6584385.1 (hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 78.2 bits (191), Expect = 7.0e-11
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 0


Query: 29  DMVEEWKEMIIGFCVSSVIAIATVSVQIQTNLPNSFQLLSIVVLLCFVSVGFARLIGSIY 88
           +M+ +W+ M++ FC+ + IAIATVSVQIQT L   FQ LS  ++ CF     A+LI   +
Sbjct: 57  EMLMQWENMMVTFCMGTAIAIATVSVQIQTKLSPMFQFLSGALMGCFCFTTSAKLIK--H 116

Query: 89  KPLSKVLYCFGGCLCATSCFIATAIPYDTHFHIIVIVLYSIFCII 134
           + +S +LY  GG    T+ FIA AIPY  HF I+ + LY +F  I
Sbjct: 117 QRVSLILYFLGGFCFVTAFFIAIAIPYAFHFQILTLALYLVFLFI 159

[Close]

BLAST of PI0013209 vs. NCBI nr
Match: KAG2680285.1 (hypothetical protein I3760_11G092600 [Carya illinoinensis])

HSP 1 Score: 55.1 bits (131), Expect = 6.4e-04
Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 33  EWKEMIIGFCVSSVIAIATVSVQIQT-NLPNSFQLLSIVVLLCFVSVGFARLIGSIYKPL 92
           +W  +++ FC++S  AIA +S+Q+Q+  LP +  + S+ ++L   S   + LI S  +  
Sbjct: 69  DWATIMVSFCLASATAIALMSIQVQSRELPTAIHVFSLAIVLAVPSFFVSELISSKLEVA 128

Query: 93  SKVLYCFGGCLCATSCFIATAIPYDTHFHIIVIVLYSIFCIIFLV 137
             VL   G  L AT+ F+A  IP+ ++F II   LY+I  ++ LV
Sbjct: 129 GHVLKRLGMFLTATAFFVAITIPFPSYFKIISWFLYAISFLVILV 173

The following BLAST results are available for this feature:

BLAST of PI0013209 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013209 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCY2	2.1e-53	74.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851175 PE=4 SV=1	[more]
A0A0A0LQP5	2.7e-40	62.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040510 PE=4 SV=1	[more]
A0A0A0LSX4	6.2e-37	62.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040520 PE=4 SV=1	[more]
A0A0A0LQB6	1.8e-28	57.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G041520 PE=4 SV=1	[more]
A0A0A0LEV1	1.6e-13	43.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000430 PE=4 SV=1	[more]

BLAST of PI0013209 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652531.1	1.9e-32	76.77	hypothetical protein Csa_013077, partial [Cucumis sativus]	[more]
KGN60003.2	3.8e-25	67.37	hypothetical protein Csa_000735, partial [Cucumis sativus]	[more]
KAG6572911.1	5.5e-24	55.00	hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6584385.1	7.0e-11	44.76	hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG2680285.1	6.4e-04	34.29	hypothetical protein I3760_11G092600 [Carya illinoinensis]	[more]

BLAST of PI0013209 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34741:SF2	IMAP FAMILY MEMBER 1, PUTATIVE-RELATED	coord: 15..140
None	No IPR available	PANTHER	PTHR34741	IMAP FAMILY MEMBER 1, PUTATIVE-RELATED	coord: 15..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013209.1	PI0013209.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding