PI0013182 (gene) Melon (PI 482460) v1

Overview


Name	PI0013182
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	60S acidic ribosomal protein P1-like
Location	chr06: 205428 .. 206796 (+)
RNA-Seq Expression	PI0013182
Synteny	PI0013182

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAACCCTAGAACGTCCCTTGCGCAGCGAAGAACACCCATTTCAATCTGGTCTAGAATCTCTCTCTTCCCCCTCAACTTTTCTGCTTTTATTCTTGTTTCGATCTTCTGTTATTCCTAATACTTCGAGCTTTCTGTTGCTATTTTTCGTTTCTTCTTCACTGATTTCGCTACCTTGTGAACGTGCAGTGAAAAATGTCGACCGGTGAAATTGCTTGCTCTTACGCTGCTCTCATCCTCTACGATGACAATATTCCCATTACCGTATGCTTCTCTTTAATCCTCGCATCTTCCTTCAATATTTAATTTTTTCTTATTCATTACTTTCGGGATCGAAGTATTTAGTGGGTGATTATCTTGTGTTGTTCTTAGTCATTGGGTGCATATCGGGATTATCTTAGTTTTTCGCCCGATTTTGGTTTCCAATAGATAAATTATGTAACTGTTCGGTTTTCTGTACATTAATATTTATATAAAAAGTGCATACGGTTTAGATCTTATGCTATTATCCTTTCTCTGGCTGTTTTTGAAATTTGTTTTAATCTATGATTATTATTTTGTTTTAGATTTCTATGATATCGTTTGTTTGCCAATCATTTATAAGGAAATAAGATTAGAAAAATGTGTTTTTTAAACAGGCCGAAAAGATTGCTACGCTTGTAAAGGCAGCTAAGGTTCCCGATGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGCTGGCCGAGAAGCGCAACATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGCGGCGCTGCAGTCACTGCTGCTGTCCCAGCTGGCGGAGCTGCTGGTGGCGGTGCTGCCGCAGCCGCTCCTCCACCGGAAGAGAAAAAGGTAAGCAATAACCAATTTCGTTCCTATGTTTGACACATATATTATAGTTTTCTATATTGTGAAAGCTTGATTTTGTGGTACTAATATGTACATATTGTGATTACTTATGTGAATTGCAGGAAGAACCCAAGGAAGAGAGTGATGATGATATGGGATTCAGTTTGTTTGATTAGGTCAAGATTTGGCATCTAATGTTTTGTTCTAGGTTTATTATCTTTTTAATGCCCGAGGGGGCCCTTGTTATTTTACAGATATGTAATTTTGGACGTCCGTAACAAATTTTCGAGAAGTTTTGATTTTAATGTGATTTGATTTCATCTTTTCGGTCTGATATATTTTAAAATTATGTCATATGCCCTCTCGGTATGGTACTTATAATATTTTTGCTCTTATGATTTGTTTGGTTTACAGTTTTTTGAATTGTAATTATGTTGTTTCATCTGGTTGGCGTGCTATATCTGGATTCTACACTCTGTTACTCGATCTTTTCAGTTGAAACTTTTTAAGTAGGC

mRNA sequence

CCCAAACCCTAGAACGTCCCTTGCGCAGCGAAGAACACCCATTTCAATCTGTGAAAAATGTCGACCGGTGAAATTGCTTGCTCTTACGCTGCTCTCATCCTCTACGATGACAATATTCCCATTACCGCCGAAAAGATTGCTACGCTTGTAAAGGCAGCTAAGGTTCCCGATGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGCTGGCCGAGAAGCGCAACATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGCGGCGCTGCAGTCACTGCTGCTGTCCCAGCTGGCGGAGCTGCTGGTGGCGGTGCTGCCGCAGCCGCTCCTCCACCGGAAGAGAAAAAGGAAGAACCCAAGGAAGAGAGTGATGATGATATGGGATTCAGTTTGTTTGATTAGGTCAAGATTTGGCATCTAATGTTTTGTTCTAGGTTTATTATCTTTTTAATGCCCGAGGGGGCCCTTGTTATTTTACAGATATGTAATTTTGGACGTCCGTAACAAATTTTCGAGAAGTTTTGATTTTAATGTGATTTGATTTCATCTTTTCGGTCTGATATATTTTAAAATTATGTCATATGCCCTCTCGGTATGGTACTTATAATATTTTTGCTCTTATGATTTGTTTGGTTTACAGTTTTTTGAATTGTAATTATGTTGTTTCATCTGGTTGGCGTGCTATATCTGGATTCTACACTCTGTTACTCGATCTTTTCAGTTGAAACTTTTTAAGTAGGC

Coding sequence (CDS)

ATGTCGACCGGTGAAATTGCTTGCTCTTACGCTGCTCTCATCCTCTACGATGACAATATTCCCATTACCGCCGAAAAGATTGCTACGCTTGTAAAGGCAGCTAAGGTTCCCGATGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGCTGGCCGAGAAGCGCAACATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGCGGCGCTGCAGTCACTGCTGCTGTCCCAGCTGGCGGAGCTGCTGGTGGCGGTGCTGCCGCAGCCGCTCCTCCACCGGAAGAGAAAAAGGAAGAACCCAAGGAAGAGAGTGATGATGATATGGGATTCAGTTTGTTTGATTAG

Protein sequence

MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLILNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD

Homology

[Close]

BLAST of PI0013182 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-33
Identity = 85/114 (74.56%), Postives = 94/114 (82.46%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           M++GE+AC YAALIL DD I ITAEKIAT+VKAA +  VESYW +LFAKL EKRN+ DLI
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANI-KVESYWPALFAKLLEKRNVEDLI 60

Query: 61  LNVGAGGGAA-VTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           L+VG+GGGAA V AA PAGGA    AAAAAP  EEKKEE KEESDDDMGFSLFD
Sbjct: 61  LSVGSGGGAAPVAAAAPAGGA----AAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]

BLAST of PI0013182 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-29
Identity = 76/114 (66.67%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I IT++KIATLVKAA V ++ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGAGGG        A  AA GGAAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of PI0013182 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-29
Identity = 82/117 (70.09%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVTAAVPAGGAAGGGAAAAAPPPEE-KKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA V AA P   AAGGGAAAAAP  EE KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of PI0013182 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 79/116 (68.10%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-SIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA V AA P   AAGGGAAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of PI0013182 vs. ExPASy Swiss-Prot
Match: Q9HGV0 (60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G06830 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-26
Identity = 72/113 (63.72%), Postives = 81/113 (71.68%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MST E+ACSYAALIL DD + ITA+KI TL+ AAKV DVE  W SLFAK  E ++I DL+
Sbjct: 1   MSTAELACSYAALILADDGVEITADKIQTLLGAAKVADVEPIWTSLFAKALEGKDIKDLL 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
            NVG+GG AA  A    G AAG  A A A   EEKKEE KEESD+DMGF LFD
Sbjct: 61  TNVGSGGAAAPAAV--GGAAAGAAAPAEAAAAEEKKEEEKEESDEDMGFGLFD 111

[Close]

BLAST of PI0013182 vs. ExPASy TrEMBL
Match: A0A5D3DB57 (60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00330 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 109/113 (96.46%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIATLVKAA V DVESYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAV AAVPAGGAA GGAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of PI0013182 vs. ExPASy TrEMBL
Match: A0A1S3AUG9 (60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 109/113 (96.46%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIATLVKAA V DVESYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAV AAVPAGGAA GGAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of PI0013182 vs. ExPASy TrEMBL
Match: A0A0A0L5M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.9e-48
Identity = 108/113 (95.58%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKV DVESYWY LFAKLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAV AA PAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of PI0013182 vs. ExPASy TrEMBL
Match: A0A6J1CS45 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013791 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.8e-44
Identity = 101/113 (89.38%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA LVKAA V  V+SYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGAAV AAVPAGGAAGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of PI0013182 vs. ExPASy TrEMBL
Match: A0A6J1ICK4 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 102/113 (90.27%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MS GEIACSYAALILYDDNIP+TAEK+ATLVKAA V D ESYW+SLFAKLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGV-DAESYWFSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGAAV AAVPAGG AGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGG-AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 111

[Close]

BLAST of PI0013182 vs. NCBI nr
Match: XP_008437779.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa] >TYK20773.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 2.4e-48
Identity = 109/113 (96.46%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIATLVKAA V DVESYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAV AAVPAGGAA GGAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of PI0013182 vs. NCBI nr
Match: XP_004133766.1 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical protein Csa_009966 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 4.0e-48
Identity = 108/113 (95.58%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKV DVESYWY LFAKLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAV AA PAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of PI0013182 vs. NCBI nr
Match: XP_038883955.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 197.6 bits (501), Expect = 5.8e-47
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIAT+VKAA VPDVESYW+ LFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAV AAVPA G AGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of PI0013182 vs. NCBI nr
Match: XP_022144008.1 (60S acidic ribosomal protein P1-like [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 7.8e-44
Identity = 101/113 (89.38%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA LVKAA V  V+SYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGAAV AAVPAGGAAGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of PI0013182 vs. NCBI nr
Match: XP_022974253.1 (60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_023538866.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 5.1e-43
Identity = 102/113 (90.27%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDLI 60
           MS GEIACSYAALILYDDNIP+TAEK+ATLVKAA V D ESYW+SLFAKLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGV-DAESYWFSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGAAV AAVPAGG AGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGG-AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 111

[Close]

BLAST of PI0013182 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family )

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-30
Identity = 76/114 (66.67%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I IT++KIATLVKAA V ++ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGAGGG        A  AA GGAAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of PI0013182 vs. TAIR 10
Match: AT4G00810.2 (60S acidic ribosomal protein family )

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-30
Identity = 76/114 (66.67%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I IT++KIATLVKAA V ++ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGAGGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGAGGG        A  AA GGAAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of PI0013182 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 128.3 bits (321), Expect = 4.0e-30
Identity = 82/117 (70.09%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVTAAVPAGGAAGGGAAAAAPPPEE-KKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA V AA P   AAGGGAAAAAP  EE KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of PI0013182 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 128.3 bits (321), Expect = 4.0e-30
Identity = 82/117 (70.09%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVTAAVPAGGAAGGGAAAAAPPPEE-KKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA V AA P   AAGGGAAAAAP  EE KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of PI0013182 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-29
Identity = 79/116 (68.10%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVPDVESYWYSLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-SIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVTAAVPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA V AA P   AAGGGAAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

The following BLAST results are available for this feature:

BLAST of PI0013182 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52855	8.4e-33	74.56	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
O23095	3.3e-29	66.67	60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ...	[more]
Q8LEQ0	5.7e-29	70.09	60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ...	[more]
Q8LCW9	1.6e-28	68.10	60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ...	[more]
Q9HGV0	3.4e-26	63.72	60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / ...	[more]

BLAST of PI0013182 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB57	1.1e-48	96.46	60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3AUG9	1.1e-48	96.46	60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=...	[more]
A0A0A0L5M7	1.9e-48	95.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1	[more]
A0A6J1CS45	3.8e-44	89.38	60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1ICK4	2.5e-43	90.27	60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378...	[more]

BLAST of PI0013182 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437779.1	2.4e-48	96.46	PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S...	[more]
XP_004133766.1	4.0e-48	95.58	60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical prote...	[more]
XP_038883955.1	5.8e-47	92.92	60S acidic ribosomal protein P1-like [Benincasa hispida]	[more]
XP_022144008.1	7.8e-44	89.38	60S acidic ribosomal protein P1-like [Momordica charantia]	[more]
XP_022974253.1	5.1e-43	90.27	60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acid...	[more]

BLAST of PI0013182 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00810.1	2.4e-30	66.67	60S acidic ribosomal protein family	[more]
AT4G00810.2	2.4e-30	66.67	60S acidic ribosomal protein family	[more]
AT5G47700.1	4.0e-30	70.09	60S acidic ribosomal protein family	[more]
AT5G47700.2	4.0e-30	70.09	60S acidic ribosomal protein family	[more]
AT1G01100.1	1.2e-29	68.10	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 22..112 e-value: 1.1E-24 score: 86.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..107
None	No IPR available	PANTHER	PTHR45696:SF22	60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED	coord: 1..113
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 1..113
None	No IPR available	CDD	cd05831	Ribosomal_P1	coord: 5..62 e-value: 6.27449E-25 score: 88.5327
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..64 e-value: 1.0E-29 score: 104.2
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 6..113 score: 14.439647

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013182.1	PI0013182.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0030295	protein kinase activator activity
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0003735	structural constituent of ribosome