PI0013169 (gene) Melon (PI 482460) v1

Overview
NamePI0013169
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionWound-responsive family protein
Locationchr11: 11099605 .. 11100349 (+)
RNA-Seq ExpressionPI0013169
SyntenyPI0013169
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAAATACCATTTCAAAGCCGCAGCTTGTGTCTCTATAAATACTCTTTCGCTTCGTTCTCTCGAGGACGAAACAAAATCCACGTCGACAAATCACTTTGTTCATTCTCTGCACCTCTTCTTCAGATCGGAAGTTACTTAGAAAGATGAGTTGTCTCGTTCTCGGTCGTCGGATGTGGATGACGGCGAGTGTAGCGGTAGTACAGGGCGGGCAATCGGACGGAGGCCACCACGAGGCGACGAAAAGAGTAAGTTTTATGCGCCAAAAACTTAGGGTTTTGTCTGCCGATACAACCGCCGTAAATCTGCGGCCAATTTCAAGTGCGTGGAATCAGGAGGGAGAGGAGATCAAGAGGCAAGCGGATGGTGAAGAGTCTCTTCAACGTGTTATGTACTTAAACTGCTGGGGGCAGGGGTGAGAACTGTGAGATAGGGACACCAAAATTGGGAGATATGAGTCTCTTGGAGATTAGTTTTTGCCCTGAGTTTTTGGGCTATTATGTCCTAATCGGAAACGAGGATTGGCTCCGGAATTGTTGAGCTATTTTTACGGAACGATCTCATCGTTGATTGTAGATTACTACTGGAACTGGGTAGCCAGAGTGATCATATTTTCTTTTTGAATTCCCTGAACAAGGGTTGTTTGTTATCCACTTTAATCAAAATCAATTGTGTATATAGCAAGAAAACGAAACTGTTCCTTTTTTTTCTTTTGTGTGTATGATTCTTTTCATCTTCACCTCGTT

mRNA sequence

CGAAAATACCATTTCAAAGCCGCAGCTTGTGTCTCTATAAATACTCTTTCGCTTCGTTCTCTCGAGGACGAAACAAAATCCACGTCGACAAATCACTTTGTTCATTCTCTGCACCTCTTCTTCAGATCGGAAGTTACTTAGAAAGATGAGTTGTCTCGTTCTCGGTCGTCGGATGTGGATGACGGCGAGTGTAGCGGTAGTACAGGGCGGGCAATCGGACGGAGGCCACCACGAGGCGACGAAAAGAGTAAGTTTTATGCGCCAAAAACTTAGGGTTTTGTCTGCCGATACAACCGCCGTAAATCTGCGGCCAATTTCAAGTGCGTGGAATCAGGAGGGAGAGGAGATCAAGAGGCAAGCGGATGGTGAAGAGTCTCTTCAACGTGTTATGTACTTAAACTGCTGGGGGCAGGGGTGAGAACTGTGAGATAGGGACACCAAAATTGGGAGATATGAGTCTCTTGGAGATTAGTTTTTGCCCTGAGTTTTTGGGCTATTATGTCCTAATCGGAAACGAGGATTGGCTCCGGAATTGTTGAGCTATTTTTACGGAACGATCTCATCGTTGATTGTAGATTACTACTGGAACTGGGTAGCCAGAGTGATCATATTTTCTTTTTGAATTCCCTGAACAAGGGTTGTTTGTTATCCACTTTAATCAAAATCAATTGTGTATATAGCAAGAAAACGAAACTGTTCCTTTTTTTTCTTTTGTGTGTATGATTCTTTTCATCTTCACCTCGTT

Coding sequence (CDS)

ATGAGTTGTCTCGTTCTCGGTCGTCGGATGTGGATGACGGCGAGTGTAGCGGTAGTACAGGGCGGGCAATCGGACGGAGGCCACCACGAGGCGACGAAAAGAGTAAGTTTTATGCGCCAAAAACTTAGGGTTTTGTCTGCCGATACAACCGCCGTAAATCTGCGGCCAATTTCAAGTGCGTGGAATCAGGAGGGAGAGGAGATCAAGAGGCAAGCGGATGGTGAAGAGTCTCTTCAACGTGTTATGTACTTAAACTGCTGGGGGCAGGGGTGA

Protein sequence

MSCLVLGRRMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPISSAWNQEGEEIKRQADGEESLQRVMYLNCWGQG
Homology
BLAST of PI0013169 vs. ExPASy TrEMBL
Match: A0A5A7TY19 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001960 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.2e-34
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0

Query: 1  MSCLVLGRRMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPISSA 60
          MS L LGRRMWM ASVAVVQ GQSDGGHHEATK V  + QKLRV SA+TTAVNLRPISSA
Sbjct: 1  MSYLGLGRRMWMMASVAVVQSGQSDGGHHEATKGVVSLPQKLRVSSAETTAVNLRPISSA 60

Query: 61 WNQEGEEIKRQADGEESLQRVMYLNCWGQG 91
          WNQEGE+IKR+A+GEESL+RVMYLNCWGQG
Sbjct: 61 WNQEGEDIKREANGEESLRRVMYLNCWGQG 90

BLAST of PI0013169 vs. ExPASy TrEMBL
Match: A0A0A0KAY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G123980 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.2e-22
Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 0

Query: 4  LVLGRRMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPISSAWNQ 63
          L LGRRMWMTASVAVVQGGQSDGGHHEATK V  + QKLRVLS                 
Sbjct: 6  LGLGRRMWMTASVAVVQGGQSDGGHHEATKGVISLPQKLRVLS----------------- 65

Query: 64 EGEEIKRQADGEESLQRVMYLNCWGQG 91
           GE+IKR+ADGEESL+RVMYLNCWGQG
Sbjct: 66 -GEKIKREADGEESLRRVMYLNCWGQG 74

BLAST of PI0013169 vs. ExPASy TrEMBL
Match: A0A6J5X0R0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22597 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.6e-08
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 0

Query: 9  RMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPIS----SAWNQE 68
          R+WM ASVAVVQ G +D G    +   SF   + R L     A +LRP+S    S ++Q 
Sbjct: 6  RVWMAASVAVVQ-GPADQGPKWTSGLKSFQLSRRRCLGGAGDASDLRPLSGAVGSGFSQV 65

Query: 69 GEEIKRQADGEESLQRVMYLNCWGQG 91
           EE + Q+D  ES+Q+VMYLNCWGQG
Sbjct: 66 CEERRNQSD--ESIQKVMYLNCWGQG 88

BLAST of PI0013169 vs. ExPASy TrEMBL
Match: M5WT38 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G230300 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.0e-08
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 9  RMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPIS----SAWNQE 68
          R+WM ASV VVQ G +D G    +   SF   + R L     A +LRP+S    S ++Q 
Sbjct: 6  RVWMAASVVVVQ-GPADQGPKWTSGLKSFQLSRRRCLGGAGDASDLRPLSGAVGSGFSQV 65

Query: 69 GEEIKRQADGEESLQRVMYLNCWGQG 91
           EE + QAD  ES+Q+VMYLNCWGQG
Sbjct: 66 CEERRNQAD--ESIQKVMYLNCWGQG 88

BLAST of PI0013169 vs. ExPASy TrEMBL
Match: A0A314UV83 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_04869 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.3e-07
Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 0

Query: 9  RMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPIS----SAWNQE 68
          R+WM ASVAVVQ G +D G    +   SF   + R L     A +LRP+S    S ++Q 
Sbjct: 6  RVWMAASVAVVQ-GPADQGPKWTSGLKSFQLTRRRCLGGAGDASDLRPLSGAVGSGFSQV 65

Query: 69 GEEIKRQADGEESLQRVMYLNCWGQ 90
           EE + QAD  ES+Q+VMYLNCWGQ
Sbjct: 66 CEERRNQAD--ESIQKVMYLNCWGQ 87

BLAST of PI0013169 vs. NCBI nr
Match: KAA0047914.1 (wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-33
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0

Query: 1  MSCLVLGRRMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPISSA 60
          MS L LGRRMWM ASVAVVQ GQSDGGHHEATK V  + QKLRV SA+TTAVNLRPISSA
Sbjct: 1  MSYLGLGRRMWMMASVAVVQSGQSDGGHHEATKGVVSLPQKLRVSSAETTAVNLRPISSA 60

Query: 61 WNQEGEEIKRQADGEESLQRVMYLNCWGQG 91
          WNQEGE+IKR+A+GEESL+RVMYLNCWGQG
Sbjct: 61 WNQEGEDIKREANGEESLRRVMYLNCWGQG 90

BLAST of PI0013169 vs. NCBI nr
Match: KAE8646839.1 (hypothetical protein Csa_020660 [Cucumis sativus])

HSP 1 Score: 113.6 bits (283), Expect = 8.8e-22
Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 0

Query: 4  LVLGRRMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPISSAWNQ 63
          L LGRRMWMTASVAVVQGGQSDGGHHEATK V  + QKLRVLS                 
Sbjct: 6  LGLGRRMWMTASVAVVQGGQSDGGHHEATKGVILLPQKLRVLS----------------- 65

Query: 64 EGEEIKRQADGEESLQRVMYLNCWGQG 91
           GE+IKR+ADGEESL+RVMYLNCWGQG
Sbjct: 66 -GEKIKREADGEESLRRVMYLNCWGQG 74

BLAST of PI0013169 vs. NCBI nr
Match: KAE8646838.1 (hypothetical protein Csa_020898 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 0

Query: 4  LVLGRRMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPISSAWNQ 63
          L LGRRMWMTASVAVVQGGQSDGGHHEATK V  + QKLRVLS                 
Sbjct: 6  LGLGRRMWMTASVAVVQGGQSDGGHHEATKGVISLPQKLRVLS----------------- 65

Query: 64 EGEEIKRQADGEESLQRVMYLNCWGQG 91
           GE+IKR+ADGEESL+RVMYLNCWGQG
Sbjct: 66 -GEKIKREADGEESLRRVMYLNCWGQG 74

BLAST of PI0013169 vs. NCBI nr
Match: KAG6604822.1 (Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 0

Query: 9   RMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTT--AVNLRPISSAWNQEGE 68
           R+WM ASVAVV GGQSDG H  A   ++  R      +A+TT  AV+LR  S+A +    
Sbjct: 284 RVWMAASVAVVHGGQSDGRHGSAEGILTLHR------NAETTAVAVDLRQFSTATSHSNR 343

Query: 69  EIKRQADGEESLQRVMYLNCWGQG 91
           +   +   +ESL+RVMY NCWGQG
Sbjct: 344 DGDEKGQADESLRRVMYFNCWGQG 361

BLAST of PI0013169 vs. NCBI nr
Match: KAG7034937.1 (hypothetical protein SDJN02_01730, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 0

Query: 9  RMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTT--AVNLRPISSAWNQEGE 68
          R+WM ASVAVV GGQSDG H  A   ++  R      +A+TT  AV+LR  S+A +    
Sbjct: 6  RVWMAASVAVVHGGQSDGRHGSAEGILTLHR------NAETTAVAVDLRQFSTATSHSNR 65

Query: 69 EIKRQADGEESLQRVMYLNCWGQG 91
          +   +   +ESL+RVMY NCWGQG
Sbjct: 66 DGDEKGQADESLRRVMYFNCWGQG 83

BLAST of PI0013169 vs. TAIR 10
Match: AT4G28240.1 (Wound-responsive family protein )

HSP 1 Score: 43.9 bits (102), Expect = 7.9e-05
Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0

Query: 9  RMWMTASVAVVQGGQSDGGHHEATKRVSFMRQKLRVLSADTTAVNLRPISSA----WNQE 68
          ++WM AS   VQ G +D G    +   S  R + R+ S      +LRP+++A     +  
Sbjct: 6  KVWMAASFVAVQ-GNADHGVKLKSGLTSAHRLQRRLSS------DLRPLAAADLTGDSLP 65

Query: 69 GEEIKRQADG--EESLQRVMYLNCWGQG 91
           EE +R +    +ESL++VMYLNCW QG
Sbjct: 66 SEERRRTSSSTPDESLRQVMYLNCWAQG 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TY198.2e-3483.33Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A0A0KAY57.2e-2268.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G123980 PE=4 SV=1[more]
A0A6J5X0R04.6e-0847.67Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22597 PE=... [more]
M5WT386.0e-0847.67Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G230300 PE=4 SV=1[more]
A0A314UV831.3e-0748.24Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_048... [more]
Match NameE-valueIdentityDescription
KAA0047914.11.7e-3383.33wound-responsive family protein [Cucumis melo var. makuwa][more]
KAE8646839.18.8e-2268.97hypothetical protein Csa_020660 [Cucumis sativus][more]
KAE8646838.11.5e-2168.97hypothetical protein Csa_020898 [Cucumis sativus][more]
KAG6604822.12.2e-0947.62Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7034937.12.2e-0947.62hypothetical protein SDJN02_01730, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT4G28240.17.9e-0536.36Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 13..89
e-value: 1.5E-8
score: 35.5
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 8..90
NoneNo IPR availablePANTHERPTHR33090:SF38DUF3774 DOMAIN PROTEINcoord: 8..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0013169.1PI0013169.1mRNA