PI0013161 (gene) Melon (PI 482460) v1

Overview


Name	PI0013161
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 13646443 .. 13647665 (-)
RNA-Seq Expression	PI0013161
Synteny	PI0013161

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACTGAAGCCCAAGTGACATGTAAGTGCAGTCTGCATTTTGAGTGCCTAGAGGTGAAGTTGGATCACATGGAGTTGTCCTTTACGACTGAGTTGACGACCATAAAGGAGATTGACTTTGTTACTCAATGTCTGTTGTTTTCAATTTATTTTGTTTATTGTTAACTAAATTATTATATCCATTCATATTTTTCATATCACTTGTAGGAGAAGTTGGTGGAAATGTAACAGTTCTATGGCGGTGGTGAACACTCATCATTTGTTGTATTGCTCGCTGACCCACCAGTTGATGACCCAATTGGTGACCTGGTGGGTTATTACGTTGATGTCCTTGCTCCAGAGACTAATGACCAGACACTTGATGATGCTGCGGGAACATCAATCAATGAAGATCCTTCTGAAGGTATTGTCCCTTTGATATATCTTCAAGAGGTGAGGATAACACACAACCATCAGTTTAGACTATACTAAAACCGAAAGATGAAGTAGATATTATTATCATCATACTTGTTAAGGTTTATTATAGATTAATATTATTAAATTTATTTATTTGATGTTTGCAACCTATCGAGCTCAATAGCGAGGTAATACCACTGTCCTAGGAACCATATGTGGTACCTAAGGAAAGGATCACAAGGAAGACATGGGTACCTGATAACTTGTAGAAATACAAGTTATTGTAGCCTTTTAGGTGGAATAATAAAGTCTTAACGCAAATAATAGAAGAAAATTCACGCAATAAAATAGAAATATTGGATAGTATGTATCGCAGATCAAAAAAGAGCTTTATTCCTATTTTACGCGTTTTCTTTGTTTAAATATAGGCTATTAGGCGAAAAGAGGAGTGTACAGGTGATAGAACTATTTTTGTATAAAAATATCTATCCTAATTCTCAATAATAAGCTTCAATTACTTATCAATGTTGTATTTTTACATAGAATATGATACTAAGCCCCTACACAAGCCCTAATGCACAAAAGTGAGCTAGAACAAACTTCTTGCGGACAAAATTGACGAATCATCGCAACCTGCCTTCACCGCAAGGCATTGCCTTCTGACTTGAGCCTCGCGAAGTACTTCATCTGCAGGAGTACATACCTCACCTCGCCGCATACTCATTCATCAGCTCACACACTTCATTCAGCTGAACACTCAAGCTCGCAAGATGCATCGCAATCGTCAGCTCGCCAAGTCCAATATCAACTCGCATGCAGTCTGA

mRNA sequence

ATGTCTACTGAAGCCCAAGTGACATGTAAGTGCAGTCTGCATTTTGAGTGCCTAGAGGTGAAGTTGGATCACATGGAGTTGTCCTTTACGACTGAGTTGACGACCATAAAGGAGATTGACTTTTTCTATGGCGGTGGTGAACACTCATCATTTGTTGTATTGCTCGCTGACCCACCAGTTGATGACCCAATTGGTGACCTGGTGGGTTATTACGTTGATGTCCTTGCTCCAGAGACTAATGACCAGACACTTGATGATGCTGCGGGAACATCAATCAATGAAGATCCTTCTGAAGGAGTACATACCTCACCTCGCCGCATACTCATTCATCAGCTCACACACTTCATTCAGCTGAACACTCAAGCTCGCAAGATGCATCGCAATCGTCAGCTCGCCAAGTCCAATATCAACTCGCATGCAGTCTGA

Coding sequence (CDS)

ATGTCTACTGAAGCCCAAGTGACATGTAAGTGCAGTCTGCATTTTGAGTGCCTAGAGGTGAAGTTGGATCACATGGAGTTGTCCTTTACGACTGAGTTGACGACCATAAAGGAGATTGACTTTTTCTATGGCGGTGGTGAACACTCATCATTTGTTGTATTGCTCGCTGACCCACCAGTTGATGACCCAATTGGTGACCTGGTGGGTTATTACGTTGATGTCCTTGCTCCAGAGACTAATGACCAGACACTTGATGATGCTGCGGGAACATCAATCAATGAAGATCCTTCTGAAGGAGTACATACCTCACCTCGCCGCATACTCATTCATCAGCTCACACACTTCATTCAGCTGAACACTCAAGCTCGCAAGATGCATCGCAATCGTCAGCTCGCCAAGTCCAATATCAACTCGCATGCAGTCTGA

Protein sequence

MSTEAQVTCKCSLHFECLEVKLDHMELSFTTELTTIKEIDFFYGGGEHSSFVVLLADPPVDDPIGDLVGYYVDVLAPETNDQTLDDAAGTSINEDPSEGVHTSPRRILIHQLTHFIQLNTQARKMHRNRQLAKSNINSHAV

Homology

[Close]

BLAST of PI0013161 vs. ExPASy TrEMBL
Match: A0A0A0KH42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383540 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.7e-25
Identity = 64/103 (62.14%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 2   STEAQVTCKCSLHFECLEVKLDHMELSFTTELTTIKE----IDFFYGGGEHSSFVVLLAD 61
           S E QVTC+ S HFECL++KLDHMELS   EL  I E    +  FY  G+H+SFV    D
Sbjct: 29  SIEVQVTCEFSQHFECLKLKLDHMELSLAAELMAINEMLTLLLKFYDRGQHTSFVAPPPD 88

Query: 62  PPVDDPIGDLVGYYVDVLAPETNDQTLDDAAGTSINEDPSEGV 101
           PPVD PIGDLVGYY+DVLAP+ +DQ LDD AGTSI+ED  EG+
Sbjct: 89  PPVDYPIGDLVGYYIDVLAPKADDQALDDVAGTSISEDLFEGI 131

[Close]

BLAST of PI0013161 vs. ExPASy TrEMBL
Match: A0A5A7VLS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00120 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.9e-09
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 42  FYGGGEHSSFVVLLADPPVDDPIGDLVGYYVDVLAPETNDQTLDDAAGTSINEDPSEGVH 101
           FYG GE  SFV      P  DPI D++G+YVDVLA + +DQ LD  A TSINEDPS+G+ 
Sbjct: 4   FYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKGMG 63

Query: 102 T 103
           T
Sbjct: 64  T 64

[Close]

BLAST of PI0013161 vs. ExPASy TrEMBL
Match: A0A0A0M3N2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699600 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 9.3e-08
Identity = 41/84 (48.81%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 25 MELSFTTELTTIKEI------------DFFYGGGEHSSFVVLLADPPVDDPIGDLVGYYV 84
          ME SF  ELTTIKE+              FYGGG+   FV  L  PPV     DLVG+YV
Sbjct: 1  MESSFMVELTTIKEMLIVLLKRKLVERQKFYGGGKGPPFVAPLVGPPVH----DLVGHYV 60

Query: 85 DVLAPETNDQTLDDAAGTSINEDP 97
          DVL  E ++Q LDD  GT  N+DP
Sbjct: 61 DVLDLEIDNQALDDVVGTLTNKDP 80

[Close]

BLAST of PI0013161 vs. ExPASy TrEMBL
Match: A0A1S3BN49 (uncharacterized protein LOC103491868 OS=Cucumis melo OX=3656 GN=LOC103491868 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-07
Identity = 45/120 (37.50%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 7   VTCKCSLHFECLEVK-------LDHMELSFTTELTTIKEIDFF------------YGGGE 66
           +TC CS H   LE K       LD M+ S T EL+TIKE+               YGGGE
Sbjct: 1   MTCNCSKHLRLLEGKLDRMNEFLDQMQSSITAELSTIKELLMLLVKGKAVDSQQCYGGGE 60

Query: 67  HSSFVVLLADPPVDDPIGDLVGYYVDVLAPETNDQTLDDAAGTSINEDPSEGVHTSPRRI 108
            +SF        VDD        +VD  AP  ++QT+++  GTSI+EDP +G++   R I
Sbjct: 61  GTSFNASKVGNLVDD-------VFVDFSAPIIDNQTINEEMGTSISEDPEDGIYHMDRCI 113

[Close]

BLAST of PI0013161 vs. NCBI nr
Match: KGN47717.1 (hypothetical protein Csa_018263 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-25
Identity = 64/103 (62.14%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 2   STEAQVTCKCSLHFECLEVKLDHMELSFTTELTTIKE----IDFFYGGGEHSSFVVLLAD 61
           S E QVTC+ S HFECL++KLDHMELS   EL  I E    +  FY  G+H+SFV    D
Sbjct: 29  SIEVQVTCEFSQHFECLKLKLDHMELSLAAELMAINEMLTLLLKFYDRGQHTSFVAPPPD 88

Query: 62  PPVDDPIGDLVGYYVDVLAPETNDQTLDDAAGTSINEDPSEGV 101
           PPVD PIGDLVGYY+DVLAP+ +DQ LDD AGTSI+ED  EG+
Sbjct: 89  PPVDYPIGDLVGYYIDVLAPKADDQALDDVAGTSISEDLFEGI 131

[Close]

BLAST of PI0013161 vs. NCBI nr
Match: KAA0066571.1 (hypothetical protein E6C27_scaffold25G001430 [Cucumis melo var. makuwa] >TYK15305.1 hypothetical protein E5676_scaffold1706G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-09
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 42  FYGGGEHSSFVVLLADPPVDDPIGDLVGYYVDVLAPETNDQTLDDAAGTSINEDPSEGVH 101
           FYG GE  SFV      P  DPI D++G+YVDVLA + +DQ LD  A TSINEDPS+G+ 
Sbjct: 4   FYGSGEGPSFVAPPVGSPTHDPISDMMGHYVDVLASKIDDQALDKTARTSINEDPSKGMG 63

Query: 102 T 103
           T
Sbjct: 64  T 64

[Close]

BLAST of PI0013161 vs. NCBI nr
Match: KGN66831.1 (hypothetical protein Csa_007207 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-07
Identity = 41/84 (48.81%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 25 MELSFTTELTTIKEI------------DFFYGGGEHSSFVVLLADPPVDDPIGDLVGYYV 84
          ME SF  ELTTIKE+              FYGGG+   FV  L  PPV     DLVG+YV
Sbjct: 1  MESSFMVELTTIKEMLIVLLKRKLVERQKFYGGGKGPPFVAPLVGPPVH----DLVGHYV 60

Query: 85 DVLAPETNDQTLDDAAGTSINEDP 97
          DVL  E ++Q LDD  GT  N+DP
Sbjct: 61 DVLDLEIDNQALDDVVGTLTNKDP 80

[Close]

BLAST of PI0013161 vs. NCBI nr
Match: XP_008450207.1 (PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 3.3e-07
Identity = 45/120 (37.50%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 7   VTCKCSLHFECLEVK-------LDHMELSFTTELTTIKEIDFF------------YGGGE 66
           +TC CS H   LE K       LD M+ S T EL+TIKE+               YGGGE
Sbjct: 1   MTCNCSKHLRLLEGKLDRMNEFLDQMQSSITAELSTIKELLMLLVKGKAVDSQQCYGGGE 60

Query: 67  HSSFVVLLADPPVDDPIGDLVGYYVDVLAPETNDQTLDDAAGTSINEDPSEGVHTSPRRI 108
            +SF        VDD        +VD  AP  ++QT+++  GTSI+EDP +G++   R I
Sbjct: 61  GTSFNASKVGNLVDD-------VFVDFSAPIIDNQTINEEMGTSISEDPEDGIYHMDRCI 113

The following BLAST results are available for this feature:

BLAST of PI0013161 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013161 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH42	1.7e-25	62.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G383540 PE=4 SV=1	[more]
A0A5A7VLS2	2.9e-09	57.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0M3N2	9.3e-08	48.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699600 PE=4 SV=1	[more]
A0A1S3BN49	1.6e-07	37.50	uncharacterized protein LOC103491868 OS=Cucumis melo OX=3656 GN=LOC103491868 PE=...	[more]

BLAST of PI0013161 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47717.1	3.5e-25	62.14	hypothetical protein Csa_018263 [Cucumis sativus]	[more]
KAA0066571.1	6.0e-09	57.38	hypothetical protein E6C27_scaffold25G001430 [Cucumis melo var. makuwa] >TYK1530...	[more]
KGN66831.1	1.9e-07	48.81	hypothetical protein Csa_007207 [Cucumis sativus]	[more]
XP_008450207.1	3.3e-07	37.50	PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo]	[more]

BLAST of PI0013161 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013161.1	PI0013161.1	mRNA