PI0013104 (gene) Melon (PI 482460) v1

Overview


Name	PI0013104
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr02: 11763777 .. 11764567 (-)
RNA-Seq Expression	PI0013104
Synteny	PI0013104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACATTGCTTACTTCTTTTGTACAAGGTGGAAATGTAAAAATTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTGTCTCGACCTAATGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGATTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAACGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGTTCTTGCTACCAACACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTAACCAACGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAACCCTGCAAACCCCTCCAAGCGAAGAAAAGGTACCATCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGAAAATCTAGAAAACAATGCCTCTTCTTCTTCTTCAAAAGGTAAAACTAGAATTTCTGATTTTTTCCCTTTTGTTCCTAACGCTCCTTTTCCTTCCAGATTGGCCCCTGAAAAGAAATAAACACCAAAGGAAGAAGAACTGATGGAGATGTTCAGGAAATTGCAAATCAACCTACCTCTGCTCGATGCGTGTTCGCACTAGATGTAGCAATGAGTATTAAGGAAGAGAGTTGTCGTACCCAAGGGAGCGAACTGAGTACTTCTAAACTTGCTTTAGGTTTATGGAAGTAA

mRNA sequence

ATGACTACATTGCTTACTTCTTTTGTACAAGGTGGAAATGTAAAAATTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTGTCTCGACCTAATGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGATTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAACGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGTTCTTGCTACCAACACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTAACCAACGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAACCCTGCAAACCCCTCCAAGCGAAGAAAAGGTACCATCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGAAAATCTAGAAAACAATGCCTCTTCTTCTTCTTCAAAAGAAATAAACACCAAAGGAAGAAGAACTGATGGAGATGTTCAGGAAATTGCAAATCAACCTACCTCTGCTCGATGCGTGTTCGCACTAGATGTAGCAATGAGTATTAAGGAAGAGAGTTGTCGTACCCAAGGGAGCGAACTGAGTACTTCTAAACTTGCTTTAGGTTTATGGAAGTAA

Coding sequence (CDS)

ATGACTACATTGCTTACTTCTTTTGTACAAGGTGGAAATGTAAAAATTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTGTCTCGACCTAATGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGATTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAACGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGTTCTTGCTACCAACACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTAACCAACGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAACCCTGCAAACCCCTCCAAGCGAAGAAAAGGTACCATCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGAAAATCTAGAAAACAATGCCTCTTCTTCTTCTTCAAAAGAAATAAACACCAAAGGAAGAAGAACTGATGGAGATGTTCAGGAAATTGCAAATCAACCTACCTCTGCTCGATGCGTGTTCGCACTAGATGTAGCAATGAGTATTAAGGAAGAGAGTTGTCGTACCCAAGGGAGCGAACTGAGTACTTCTAAACTTGCTTTAGGTTTATGGAAGTAA

Protein sequence

MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNPNLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKTLQTPPSEEKVPSNPILLVDENKKKEENLENNASSSSSKEINTKGRRTDGDVQEIANQPTSARCVFALDVAMSIKEESCRTQGSELSTSKLALGLWK

Homology

[Close]

BLAST of PI0013104 vs. ExPASy TrEMBL
Match: A0A5D3CB46 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00170 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.2e-62
Identity = 126/194 (64.95%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 1   MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNP 60
           MTTLLTSFVQG   K+ KCGVCGL+GHPNDKC  ++E+ N++R+YDPH NTYN+ WRDN 
Sbjct: 106 MTTLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNL 165

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA S+S+NQG+NLED++K LATNT+SFQ +MKQQM+QLT AISK++GK
Sbjct: 166 NLRWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGK 225

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSS 180
           GKLPAQPDHANVSAISLRSGK L TP + E+K+ S P+ L  +N+ KEE ++      S 
Sbjct: 226 GKLPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVD------SK 285

Query: 181 KEINTKGRRTDGDV 194
           KE NT+G RT GD+
Sbjct: 286 KEGNTQGGRTLGDI 293

[Close]

BLAST of PI0013104 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 6.5e-62
Identity = 126/191 (65.97%), Postives = 155/191 (81.15%), Query Frame = 0


Query: 1   MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNP 60
           MTTLLTSFVQG  +K+ KCGVC L+GHPNDKC +++E+ N++RKYDP+GNTYN+ WRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA  +S+NQG+NLED++K LATNT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSS 180
           GKLPAQPD+ANVSAISLRSGK L TP + E+KV S  + L  +N+ KEE +E N S S+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 KEINTKGRRTD 191
           K  N K  R D
Sbjct: 237 K--NDKSPRND 245

[Close]

BLAST of PI0013104 vs. ExPASy TrEMBL
Match: A0A1S3CQU8 (uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 8.5e-62
Identity = 121/181 (66.85%), Postives = 150/181 (82.87%), Query Frame = 0


Query: 1   MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNP 60
           MTTLLTSFVQG  +K+ KCGVCGL+G+PNDKC  ++E+ N++R+YDPHGNTYN  WRDNP
Sbjct: 56  MTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNP 115

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA  +S+NQG+NLED++K LATNT+SFQ +MKQQM+QLT  ISK++GK
Sbjct: 116 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKMDGK 175

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSS 180
           GKLPAQPDH NVSAISLRSGK L TP + E+KV S  + L  +N+ KEE +E N+SSS+S
Sbjct: 176 GKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSSSNS 235

[Close]

BLAST of PI0013104 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.5e-61
Identity = 121/180 (67.22%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 2   TTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNPN 61
           TTLLTSFVQG  +K+ KCGVCGL+GH N+KC +++E+ N++R+YDPH NTYN+ WRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGKG 121
           LRWGND Q+  QA S+S+NQG+NLED++K LATNT+SFQ EMKQQM+QLT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSSK 181
           KLPAQ DHANVSAISLRSGK L TP + E+KV S P+ L  +N+ KEE +E N S S+SK
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

[Close]

BLAST of PI0013104 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.5e-61
Identity = 120/181 (66.30%), Postives = 150/181 (82.87%), Query Frame = 0


Query: 1   MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNP 60
           MTTLLTSFVQG  +K+ KCGVCGL+GHPNDKC +++E+ N++RKYDPHGNTYN+ WRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA S+S+NQG+NLED++K LATNT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSS 180
           GKL AQ ++ANVSA+SLRSGK L TP + E+K  S P+ L  +N+ KEE +E N S  +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

[Close]

BLAST of PI0013104 vs. NCBI nr
Match: TYK07549.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.8 bits (634), Expect = 4.6e-62
Identity = 126/194 (64.95%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 1   MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNP 60
           MTTLLTSFVQG   K+ KCGVCGL+GHPNDKC  ++E+ N++R+YDPH NTYN+ WRDN 
Sbjct: 106 MTTLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNL 165

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA S+S+NQG+NLED++K LATNT+SFQ +MKQQM+QLT AISK++GK
Sbjct: 166 NLRWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGK 225

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSS 180
           GKLPAQPDHANVSAISLRSGK L TP + E+K+ S P+ L  +N+ KEE ++      S 
Sbjct: 226 GKLPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVD------SK 285

Query: 181 KEINTKGRRTDGDV 194
           KE NT+G RT GD+
Sbjct: 286 KEGNTQGGRTLGDI 293

[Close]

BLAST of PI0013104 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.3e-61
Identity = 126/191 (65.97%), Postives = 155/191 (81.15%), Query Frame = 0


Query: 1   MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNP 60
           MTTLLTSFVQG  +K+ KCGVC L+GHPNDKC +++E+ N++RKYDP+GNTYN+ WRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA  +S+NQG+NLED++K LATNT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSS 180
           GKLPAQPD+ANVSAISLRSGK L TP + E+KV S  + L  +N+ KEE +E N S S+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 KEINTKGRRTD 191
           K  N K  R D
Sbjct: 237 K--NDKSPRND 245

[Close]

BLAST of PI0013104 vs. NCBI nr
Match: XP_008465649.1 (PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-61
Identity = 121/181 (66.85%), Postives = 150/181 (82.87%), Query Frame = 0


Query: 1   MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNP 60
           MTTLLTSFVQG  +K+ KCGVCGL+G+PNDKC  ++E+ N++R+YDPHGNTYN  WRDNP
Sbjct: 56  MTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNP 115

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA  +S+NQG+NLED++K LATNT+SFQ +MKQQM+QLT  ISK++GK
Sbjct: 116 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKMDGK 175

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSS 180
           GKLPAQPDH NVSAISLRSGK L TP + E+KV S  + L  +N+ KEE +E N+SSS+S
Sbjct: 176 GKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSSSNS 235

[Close]

BLAST of PI0013104 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 5.1e-61
Identity = 121/180 (67.22%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 2   TTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNPN 61
           TTLLTSFVQG  +K+ KCGVCGL+GH N+KC +++E+ N++R+YDPH NTYN+ WRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGKG 121
           LRWGND Q+  QA S+S+NQG+NLED++K LATNT+SFQ EMKQQM+QLT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSSK 181
           KLPAQ DHANVSAISLRSGK L TP + E+KV S P+ L  +N+ KEE +E N S S+SK
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

[Close]

BLAST of PI0013104 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-60
Identity = 120/181 (66.30%), Postives = 150/181 (82.87%), Query Frame = 0


Query: 1   MTTLLTSFVQGGNVKIAKCGVCGLIGHPNDKCLDLMEEANVIRKYDPHGNTYNADWRDNP 60
           MTTLLTSFVQG  +K+ KCGVCGL+GHPNDKC +++E+ N++RKYDPHGNTYN+ WRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKVLATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA S+S+NQG+NLED++K LATNT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNASSSSS 180
           GKL AQ ++ANVSA+SLRSGK L TP + E+K  S P+ L  +N+ KEE +E N S  +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

The following BLAST results are available for this feature:

BLAST of PI0013104 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CB46	2.2e-62	64.95	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
E5GBZ4	6.5e-62	65.97	Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3CQU8	8.5e-62	66.85	uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=...	[more]
A0A5A7VQ60	2.5e-61	67.22	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CRR8	5.5e-61	66.30	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of PI0013104 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07549.1	4.6e-62	64.95	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
ADN33993.1	1.3e-61	65.97	retrotransposon gag protein [Cucumis melo subsp. melo]	[more]
XP_008465649.1	1.8e-61	66.85	PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]	[more]
KAA0067359.1	5.1e-61	67.22	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos...	[more]
KAA0047407.1	1.1e-60	66.30	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]

BLAST of PI0013104 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013104.1	PI0013104.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding