PI0013081 (gene) Melon (PI 482460) v1

Overview
NamePI0013081
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Locationchr05: 21743299 .. 21745525 (-)
RNA-Seq ExpressionPI0013081
SyntenyPI0013081
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGATTTCTCACATTCATTATCCCTCTCGGTTGTAGGTCTCCTACCTCCACCTCTCCTCTTTTGAGACCCTATGGCTGCTCGGAAGGAGGTAATTTAATTTTTATTTTCCTCTTCATTATTTCATTAATTTATTTTATTATTATGTAATGATTATCCCATGAGTTTATTTAAATTTTCAATGTTTGAAATCTGGACTTCAATCTGGGTTCCCATGAAAATTTTCTAATTTTTTTTTTTTTTTTTTTTTATCAAATCTCATTTTCGTGTTAAAACAGTATATTTGAAGTAATGTTGTGTTGTTATTAAGAAAAAAGAAGCGTTTAGAGGATAATTGTGCCTTAGTTGATTAAATAATTTATTTTGCCATTTATGTATGATGGTTTAGCTTGAAACTTTGGGTGTCTTTTGTATCAAAATTAGGTAGAAGAATGAATTATAGAAGCTCAATAGTTCAAAATTTTGATTAAGAGATGTTAATCTTACAAGATTTCCAGCTAAAAATTAGAAAGATTTCACCTTGAACGTCTATAGCGATTTCATTTATGAACAATGAGCGATTTCATTTATGAAGAACAATGATTAAGTGCATCTCCATACTCCCCATTCTTTATACAAAAATAACTTTTTTAGTATTTATTTAAAAGAAAAAATTGTCAAGTTTTTTTCCTTTTCTGAAATAGAAATAGGCAAAGTTTTCAGGAATTTTTTTTCTATTTTCTTATCCTAATTCAAGAGAATCCTTGTATTTGACACTCTTGCATCTGGAACAATTCCTGGCAAAAACAACCATAATGAATAAATAAAAAACAATCAAAATCATAAAATTGGTGATGTAAGAAAAATATGATGAATCTTTGAATATGCAACTAAAAATTTGGTTGGTGTATTTGTGTCTATGCAGAACAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCAAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACCGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCGTGGATAAACGTCATCGCCACCAAAAAGATCACCATCATCGCCATCACCATGAACACCAACATCAACATCGCCACCATCACCACCAACATCATCATCAACCACCACCAGCAGATGACTCTGTTGTCCAAGTAAGTACTTTCGTCTATTCTTTTTTAGTACAAAAAATAGGGAAAATGAGGATTTGAGCCTCCGACCTCAAAAAAAACAAGTACTTGTCAGTTACTATAAAAAGTTATGTTTATTTTTTGCCAGCATTAGTTGTTCTTTTCTCACTTTAATCTCAAATCAGATATACAACTAGTTTTTTTTTTTTTTTTTTGGGATAACCCTCCCAACAAGCAACAATTGGGCGTCAAGAAAAACTTATAGAGCATTAAACTCTACATAAGTTTAACCACATATTAAATCCATTATCTCTAAGCTCTTTATCAAACCCATGGTCCTCTTCAAAAGGTTAATCCAAACTTTAAACTTAATGAAGAAAACCTAAGTTGAACAAGAATTCAATGTAGCATTTGATAACAGAAGGTGAAAAAAATTTGTATAGAAGAAAGTACCTGTTGGATACTAAGGCTGAGGAACAGTTGCTGTATCGATCTTTAAATGGGTGATTATTTTTATGCTATTCATGATGGTCGCAACTTCATTTATCGCCTTCTGTGAAGTTGCTCTTCCAGTAATTAGAGCTTTTCCCGAAGTTTAACCACAGCTGTAACTTTAAAGTAATGCACAATTATCTTTAAAAAATAACACTACAGTTCTTATCTTACTAAGTTACTATTTTGTTCTATCATACAATGGACATAAGCATATTTGTAATAGAATTTACAATAGCAGGCTTTGTAATGATCATTTGAAGATGGATTCTATATTGACCTAAAAATTGATAGTAAAATAGATAACGAAAATTTTATACAGTACAGTATAAGAAACGTGAGTGATTGCAACATAATTTTGTAAAACATATAAATATTGCAAATTTAATGCTTGCTCTTTTCTTTTTTCTTATCCAGCAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGCATCAGGCCTTGATATGAGACAGAAGCCAACCAACTCCTCTATGTTTTAGTCATATCATGCTGTTTTTCTGAATCCTTTTTTTTTCTGGCATGTAAAT

mRNA sequence

GAAGATTTCTCACATTCATTATCCCTCTCGGTTGTAGGTCTCCTACCTCCACCTCTCCTCTTTTGAGACCCTATGGCTGCTCGGAAGGAGAACAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCAAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACCGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCGTGGATAAACGTCATCGCCACCAAAAAGATCACCATCATCGCCATCACCATGAACACCAACATCAACATCGCCACCATCACCACCAACATCATCATCAACCACCACCAGCAGATGACTCTGTTGTCCAACAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGCATCAGGCCTTGATATGAGACAGAAGCCAACCAACTCCTCTATGTTTTAGTCATATCATGCTGTTTTTCTGAATCCTTTTTTTTTCTGGCATGTAAAT

Coding sequence (CDS)

ATGGCTGCTCGGAAGGAGAACAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCAAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACCGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCGTGGATAAACGTCATCGCCACCAAAAAGATCACCATCATCGCCATCACCATGAACACCAACATCAACATCGCCACCATCACCACCAACATCATCATCAACCACCACCAGCAGATGACTCTGTTGTCCAACAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGCATCAGGCCTTGA

Protein sequence

MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERELMEAVDKRHRHQKDHHHRHHHEHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTYINCCIRP
Homology
BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A0A0KK09 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430670 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.6e-50
Identity = 108/133 (81.20%), Postives = 114/133 (85.71%), Query Frame = 0

Query: 1   MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERE 60
           MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFK+TSLGNE+E
Sbjct: 1   MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKKTSLGNEKE 60

Query: 61  LMEAVDKRHRHQK----------DHHHRHHHEHQHQHRHHHHQHHHQPPPADDSVVQQKK 120
           LMEAVDK HRHQK           HHH H H+H H+H+HHHHQHHHQ PP DDSV  +KK
Sbjct: 61  LMEAVDKHHRHQKHRHHRHRHRHHHHHHHDHDHDHEHQHHHHQHHHQSPPGDDSVGPEKK 120

Query: 121 KKILTYINCCIRP 124
           KKILTYINCCIRP
Sbjct: 121 KKILTYINCCIRP 133

BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A6J1JEB9 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30
Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 0

Query: 5   KENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERELMEA 64
           +  NRW+SVPEFGGWD+N P ASNYSVVF++ARA++KQQKTDLTEFKR SLGNE+ELM  
Sbjct: 4   RTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAI 63

Query: 65  VDKRHRHQKDHHHRHHHEHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTYINCCIRP 124
            DK  RH   H H H  EH+HQH HH H  HH   PAD +VV QKKKKIL+ ++CCI+P
Sbjct: 64  ADKHDRH---HQHHHRREHRHQHHHHRHHPHHGQLPADGAVVGQKKKKILSCMSCCIKP 119

BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A6J1DJD7 (lateral signaling target protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC111020600 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.9e-29
Identity = 83/106 (78.30%), Postives = 90/106 (84.91%), Query Frame = 0

Query: 1   MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERE 60
           M ARKEN  WRSVPEFGGWDHNAPGASNYSVVFTQARA+RKQQKTDLTEFKR+SLGNERE
Sbjct: 1   MDARKENG-WRSVPEFGGWDHNAPGASNYSVVFTQARANRKQQKTDLTEFKRSSLGNERE 60

Query: 61  LMEAVDKRHRHQKDHHHRHHHEHQHQH-RHHHHQHHHQPPPADDSV 106
           LM A   + +H+  H HRH HEHQ+QH RHHHHQHHHQ   ADDS+
Sbjct: 61  LMAAAGHQQKHR--HQHRHRHEHQNQHRRHHHHQHHHQ-AAADDSI 102

BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A6J1FT95 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.4e-29
Identity = 76/119 (63.87%), Postives = 90/119 (75.63%), Query Frame = 0

Query: 5   KENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERELMEA 64
           +  NRW+SVPEFGGWD+N P ASNYSVVF++ARA++KQQKTDLTEFKR SLGNE+ELM  
Sbjct: 4   RTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAI 63

Query: 65  VDKRHRHQKDHHHRHHHEHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTYINCCIRP 124
            DK  RH   H HRH HEH+ QH H  H  HH   P   +VV QKKKKIL+ ++CCI+P
Sbjct: 64  ADKHDRH---HQHRHRHEHRQQHHHQRHHPHHGQLPVGGAVVGQKKKKILSCMSCCIKP 119

BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A6J1JCC4 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.9e-28
Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 0

Query: 5   KENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERELMEA 64
           +  NRW+SVPEFGGWD+N P ASNYSVVF++ARA++KQQKTDLTEFKR SLGNE+ELM  
Sbjct: 4   RTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAI 63

Query: 65  VDKRHRHQKDHHHRHHHEHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTYINCCIRP 124
            DK  RH   H H H  EH+HQH HH H  HH   PAD +VV  KKKKIL+ ++CCI+P
Sbjct: 64  ADKHDRH---HQHHHRREHRHQHHHHRHHPHHGQLPADGAVV-GKKKKILSCMSCCIKP 118

BLAST of PI0013081 vs. NCBI nr
Match: XP_038901151.1 (lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 7.5e-48
Identity = 107/127 (84.25%), Postives = 110/127 (86.61%), Query Frame = 0

Query: 1   MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERE 60
           MAAR E NRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQ+KTDLTEFKRTSLGNERE
Sbjct: 1   MAARTEKNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQRKTDLTEFKRTSLGNERE 60

Query: 61  LMEAVDKRHRHQKDHHHRHHH----EHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTY 120
           LM A  K HRHQK HHHRHHH    +HQHQH+H HH HH   PPADDSVV QKKKKILTY
Sbjct: 61  LMAATGKCHRHQKHHHHRHHHHHEQQHQHQHQHRHHHHHRHQPPADDSVVPQKKKKILTY 120

Query: 121 INCCIRP 124
           INCCIRP
Sbjct: 121 INCCIRP 127

BLAST of PI0013081 vs. NCBI nr
Match: XP_038901152.1 (lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 194.1 bits (492), Expect = 7.0e-46
Identity = 106/127 (83.46%), Postives = 109/127 (85.83%), Query Frame = 0

Query: 1   MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERE 60
           MAAR E NRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQ+KTDLTEFKRTSLGNERE
Sbjct: 1   MAARTEKNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQRKTDLTEFKRTSLGNERE 60

Query: 61  LMEAVDKRHRHQKDHHHRHHH----EHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTY 120
           LM A  K HRHQK HHHRHHH    +HQHQH+H HH HH   PPADDSVV  KKKKILTY
Sbjct: 61  LMAATGKCHRHQKHHHHRHHHHHEQQHQHQHQHRHHHHHRHQPPADDSVV-PKKKKILTY 120

Query: 121 INCCIRP 124
           INCCIRP
Sbjct: 121 INCCIRP 126

BLAST of PI0013081 vs. NCBI nr
Match: KAE8647369.1 (hypothetical protein Csa_004264 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 9.8e-40
Identity = 93/115 (80.87%), Postives = 98/115 (85.22%), Query Frame = 0

Query: 1   MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERE 60
           MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFK+TSLGNE+E
Sbjct: 1   MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKKTSLGNEKE 60

Query: 61  LMEAVDKRHRHQK----------DHHHRHHHEHQHQHRHHHHQHHHQPPPADDSV 106
           LMEAVDK HRHQK           HHH H H+H H+H+HHHHQHHHQ PP DDSV
Sbjct: 61  LMEAVDKHHRHQKHRHHRHRHRHHHHHHHDHDHDHEHQHHHHQHHHQSPPGDDSV 115

BLAST of PI0013081 vs. NCBI nr
Match: KAG6605945.1 (hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035891.1 hypothetical protein SDJN02_02690, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33
Identity = 86/121 (71.07%), Postives = 94/121 (77.69%), Query Frame = 0

Query: 5   KENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERELMEA 64
           ++NNRW+SVPEFGGWDHNAPGASNYSVVF+QARA+RKQQKTDLTEFKR SLGNERE+M  
Sbjct: 6   EKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAM 65

Query: 65  VDKRHRHQKDHHHRHHHEHQHQHRHHHH--QHHHQPPPADDSVVQQKKKKILTYINCCIR 124
            DK  R Q  HHHRHH  + H  R+ HH    H   P   D VV QKKKKILTYINCCIR
Sbjct: 66  ADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYINCCIR 125

BLAST of PI0013081 vs. NCBI nr
Match: XP_023512837.1 (dendritic arbor reduction protein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.1 bits (357), Expect = 3.1e-30
Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 0

Query: 5   KENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERELMEA 64
           +  NRW+SVPEFGGWD+N P ASNYSVVF++ARA++KQQKTDLTEFKR SLGNE+ELM  
Sbjct: 4   RTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAI 63

Query: 65  VDKRHRHQKDHHHRHHHEHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTYINCCIRP 124
            DK  RH   H HRH HEH+HQH H  H  HH   P D +VV QKKKKIL+ ++CCI+P
Sbjct: 64  ADKHDRH---HQHRHRHEHRHQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 119

BLAST of PI0013081 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 88.2 bits (217), Expect = 5.0e-18
Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 0

Query: 1   MAARKENNRWRSVPEFGGWDHNAPG-ASNYSVVFTQARADRKQQKTDLTEFKRTSLGNER 60
           M  R+EN  W  VP+FGGWD   P  A+NYSVVF++ARA+RKQ K  +   + +SLG+E+
Sbjct: 1   MDKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGV---RHSSLGSEQ 60

Query: 61  ELMEAVDKRHRHQKDHHHRHHHEHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTYINC 120
           ELM +V                      R +H Q HH+    DD  V  KKK+ILTYINC
Sbjct: 61  ELMVSV----------------------RRNHQQLHHRHETQDDDPV-MKKKRILTYINC 98

Query: 121 CIRP 124
           CIRP
Sbjct: 121 CIRP 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KK098.6e-5081.20AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G43... [more]
A0A6J1JEB92.0e-3065.55dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1DJD72.9e-2978.30lateral signaling target protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1FT958.4e-2963.87dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1JCC41.9e-2864.71dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
Match NameE-valueIdentityDescription
XP_038901151.17.5e-4884.25lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida][more]
XP_038901152.17.0e-4683.46lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida][more]
KAE8647369.19.8e-4080.87hypothetical protein Csa_004264 [Cucumis sativus][more]
KAG6605945.11.8e-3371.07hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023512837.13.1e-3065.55dendritic arbor reduction protein 1 isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G19473.15.0e-1845.97RPM1-interacting protein 4 (RIN4) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 9..41
e-value: 1.3E-8
score: 34.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..95
NoneNo IPR availablePANTHERPTHR33882:SF11RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEINcoord: 1..122
NoneNo IPR availablePANTHERPTHR33882PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEINcoord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0013081.1PI0013081.1mRNA