PI0013081 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGATTTCTCACATTCATTATCCCTCTCGGTTGTAGGTCTCCTACCTCCACCTCTCCTCTTTTGAGACCCTATGGCTGCTCGGAAGGAGGTAATTTAATTTTTATTTTCCTCTTCATTATTTCATTAATTTATTTTATTATTATGTAATGATTATCCCATGAGTTTATTTAAATTTTCAATGTTTGAAATCTGGACTTCAATCTGGGTTCCCATGAAAATTTTCTAATTTTTTTTTTTTTTTTTTTTTATCAAATCTCATTTTCGTGTTAAAACAGTATATTTGAAGTAATGTTGTGTTGTTATTAAGAAAAAAGAAGCGTTTAGAGGATAATTGTGCCTTAGTTGATTAAATAATTTATTTTGCCATTTATGTATGATGGTTTAGCTTGAAACTTTGGGTGTCTTTTGTATCAAAATTAGGTAGAAGAATGAATTATAGAAGCTCAATAGTTCAAAATTTTGATTAAGAGATGTTAATCTTACAAGATTTCCAGCTAAAAATTAGAAAGATTTCACCTTGAACGTCTATAGCGATTTCATTTATGAACAATGAGCGATTTCATTTATGAAGAACAATGATTAAGTGCATCTCCATACTCCCCATTCTTTATACAAAAATAACTTTTTTAGTATTTATTTAAAAGAAAAAATTGTCAAGTTTTTTTCCTTTTCTGAAATAGAAATAGGCAAAGTTTTCAGGAATTTTTTTTCTATTTTCTTATCCTAATTCAAGAGAATCCTTGTATTTGACACTCTTGCATCTGGAACAATTCCTGGCAAAAACAACCATAATGAATAAATAAAAAACAATCAAAATCATAAAATTGGTGATGTAAGAAAAATATGATGAATCTTTGAATATGCAACTAAAAATTTGGTTGGTGTATTTGTGTCTATGCAGAACAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCAAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACCGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCGTGGATAAACGTCATCGCCACCAAAAAGATCACCATCATCGCCATCACCATGAACACCAACATCAACATCGCCACCATCACCACCAACATCATCATCAACCACCACCAGCAGATGACTCTGTTGTCCAAGTAAGTACTTTCGTCTATTCTTTTTTAGTACAAAAAATAGGGAAAATGAGGATTTGAGCCTCCGACCTCAAAAAAAACAAGTACTTGTCAGTTACTATAAAAAGTTATGTTTATTTTTTGCCAGCATTAGTTGTTCTTTTCTCACTTTAATCTCAAATCAGATATACAACTAGTTTTTTTTTTTTTTTTTTGGGATAACCCTCCCAACAAGCAACAATTGGGCGTCAAGAAAAACTTATAGAGCATTAAACTCTACATAAGTTTAACCACATATTAAATCCATTATCTCTAAGCTCTTTATCAAACCCATGGTCCTCTTCAAAAGGTTAATCCAAACTTTAAACTTAATGAAGAAAACCTAAGTTGAACAAGAATTCAATGTAGCATTTGATAACAGAAGGTGAAAAAAATTTGTATAGAAGAAAGTACCTGTTGGATACTAAGGCTGAGGAACAGTTGCTGTATCGATCTTTAAATGGGTGATTATTTTTATGCTATTCATGATGGTCGCAACTTCATTTATCGCCTTCTGTGAAGTTGCTCTTCCAGTAATTAGAGCTTTTCCCGAAGTTTAACCACAGCTGTAACTTTAAAGTAATGCACAATTATCTTTAAAAAATAACACTACAGTTCTTATCTTACTAAGTTACTATTTTGTTCTATCATACAATGGACATAAGCATATTTGTAATAGAATTTACAATAGCAGGCTTTGTAATGATCATTTGAAGATGGATTCTATATTGACCTAAAAATTGATAGTAAAATAGATAACGAAAATTTTATACAGTACAGTATAAGAAACGTGAGTGATTGCAACATAATTTTGTAAAACATATAAATATTGCAAATTTAATGCTTGCTCTTTTCTTTTTTCTTATCCAGCAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGCATCAGGCCTTGATATGAGACAGAAGCCAACCAACTCCTCTATGTTTTAGTCATATCATGCTGTTTTTCTGAATCCTTTTTTTTTCTGGCATGTAAAT GAAGATTTCTCACATTCATTATCCCTCTCGGTTGTAGGTCTCCTACCTCCACCTCTCCTCTTTTGAGACCCTATGGCTGCTCGGAAGGAGAACAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCAAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACCGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCGTGGATAAACGTCATCGCCACCAAAAAGATCACCATCATCGCCATCACCATGAACACCAACATCAACATCGCCACCATCACCACCAACATCATCATCAACCACCACCAGCAGATGACTCTGTTGTCCAACAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGCATCAGGCCTTGATATGAGACAGAAGCCAACCAACTCCTCTATGTTTTAGTCATATCATGCTGTTTTTCTGAATCCTTTTTTTTTCTGGCATGTAAAT ATGGCTGCTCGGAAGGAGAACAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCAAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACCGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCGTGGATAAACGTCATCGCCACCAAAAAGATCACCATCATCGCCATCACCATGAACACCAACATCAACATCGCCACCATCACCACCAACATCATCATCAACCACCACCAGCAGATGACTCTGTTGTCCAACAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGCATCAGGCCTTGA MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKRTSLGNERELMEAVDKRHRHQKDHHHRHHHEHQHQHRHHHHQHHHQPPPADDSVVQQKKKKILTYINCCIRP Homology
BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A0A0KK09 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430670 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 8.6e-50 Identity = 108/133 (81.20%), Postives = 114/133 (85.71%), Query Frame = 0
BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A6J1JEB9 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30 Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 0
BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A6J1DJD7 (lateral signaling target protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC111020600 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.9e-29 Identity = 83/106 (78.30%), Postives = 90/106 (84.91%), Query Frame = 0
BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A6J1FT95 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 8.4e-29 Identity = 76/119 (63.87%), Postives = 90/119 (75.63%), Query Frame = 0
BLAST of PI0013081 vs. ExPASy TrEMBL
Match: A0A6J1JCC4 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.9e-28 Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 0
BLAST of PI0013081 vs. NCBI nr
Match: XP_038901151.1 (lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 200.7 bits (509), Expect = 7.5e-48 Identity = 107/127 (84.25%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of PI0013081 vs. NCBI nr
Match: XP_038901152.1 (lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida]) HSP 1 Score: 194.1 bits (492), Expect = 7.0e-46 Identity = 106/127 (83.46%), Postives = 109/127 (85.83%), Query Frame = 0
BLAST of PI0013081 vs. NCBI nr
Match: KAE8647369.1 (hypothetical protein Csa_004264 [Cucumis sativus]) HSP 1 Score: 173.7 bits (439), Expect = 9.8e-40 Identity = 93/115 (80.87%), Postives = 98/115 (85.22%), Query Frame = 0
BLAST of PI0013081 vs. NCBI nr
Match: KAG6605945.1 (hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035891.1 hypothetical protein SDJN02_02690, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33 Identity = 86/121 (71.07%), Postives = 94/121 (77.69%), Query Frame = 0
BLAST of PI0013081 vs. NCBI nr
Match: XP_023512837.1 (dendritic arbor reduction protein 1 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 142.1 bits (357), Expect = 3.1e-30 Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 0
BLAST of PI0013081 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 88.2 bits (217), Expect = 5.0e-18 Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|