PI0013079 (gene) Melon (PI 482460) v1

Overview


Name	PI0013079
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	KRR1 small subunit processome component
Location	chr01: 7514561 .. 7518139 (-)
RNA-Seq Expression	PI0013079
Synteny	PI0013079

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGACATAGAGCAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCCAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGGTGGTCTCCTCGAAGTCAGCTCTTTCTCTACTCTCTTTCCCGTGTACAGAGGTATGGAGTTTTATGTTTTCACGTTTTAAATTTTGTTCTCTTGCTATTACCCAGGATTATATTGGAATAAATGTTCTCCTACTGAAACACTTTCCAGTTATCCCCTACTTCGATTTTGTTTCAACTATTTTGTTCTGCCAACTAGTTTGGCTGAGAAGCAATTACTGTTTCATGTTTCATTGTTCTACGCCAATATGTTTTAGTTCCTGTTTTGTCAATCACTTCTACGTCTACATGGAGGCTAAGGGGGCGATTGGGAGAATAGTTGATTTATGATTGGGAGAATGGTTGATTTATGAAGGGTTAGTGTTTTATCATAAAACTAGTGTTATGATAATATGCGTTTGGGGAAGGGTTATGTTAGGTAGTATGTGTTTGGAGGAAGGGTTATCCTAGAAGTCTTATGATAAAAGTGTCAAGGGTGTTATGGGAAAGTGCGAGAGGTGTTATGTGAAAGTGTGAGAAGTGTTATGTGGCAGTAGAATAGCAAGGTTTTGATTTATAACTTTATGAATTTTGGTAGTCTTTATCGGTGGAAAACGTTCAGCACACTTTTTTTTTTCTTTCGATATGCTTGTTTTTGCCTTAACTTACAGATATTTCTGCTATACAATTGGATTAATCAGATTCCAATCCTTAGAGGTTTCAATTTTTCCATTTTCAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGGTAAGAGTCCATAATGGCTTCGGTTCTGTTGTTTGAGATATTTTGAAACCAGTTGTAATTCTCACTTCATGTGTTTTGATCTCCTACGTTTGGTCAGATTGAAGGATCAATGACAGTTACAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATTAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGTTAAACAATGATTTGATTTATTTTATGTTATTTGTTCTGACATGGTAGTTTGAGTCTTTCTTTCACCAATCCTTTTAATTGGTTTCTTGAATTGTGTTTTCTGACCATGTTTTTTGTGTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGTCAGTATCTTTTACTACATTTTTTTTTTATTACAGATTGATTTTATATTCTTTTTCTCTCAAGGCATTTGACTAAGAAGTTTTGCATAGTTGATAGTTGTCATCCTTTATCCTTGAACATGCTCTAATGTTTGAAGTTCATCCTATATTCAAGAACACTATATCTATGGTAACCTACCGAGTTAGCCCCTAATCTCCTTGCATATGCTATAAGCCTAAGTCTGAAGTTCTTCCTAAATTCAAGAAGTCTACATGGCTTACTATTACTGAAAACTGGGAACATTCAGACATAAATTGAAATGTGGACTTTTATTCTTTTGATTTGAAGTTGAAAACTAGCCTGCCATGTTAGAGACTAAGTTTCAGTGTTTTTGTGTGTGTATATGTATCACTATACGTGATGTTAGTAAGTATGTATTGTGTTACATAATAATTCTTAAGAGGACTACCATTTTTTCATGCCAATTAGGATCTTTTGTCATCCTTTCATTTTTTATCATCTGCTCTAGAGAAGCTTGAAATTTGACTTTGGCCTGACCTTGATTATGATGCAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGTTCATATAGCTTATTTGATTGATTTTCAAGCTTACTATGTTTCTCTTACTTTGATAAAGATATCTTAATTTTAGGTTTCTTAGACGGGAAATTGTGTTTGTCACTTTGTCTAAGTCTATGTTCTATTTCATCTCTCTTATCTTTTAATTGTCATTCTAGCACAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGTATGTATATGTTCTTTTGCTGCTTTCCTATCATCTCTTTCAGCCTTTCCTCTTCTGTAGTGTCAATCTTGTTCTTACTGGCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGGTTTCTGGGTTTAATTTCTGCATATCATTTTTGTTACTCCACGATAGCTCTCTGCGTAACTTGGTATCTCATGCAGATTCTCATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGTATGCCATTTAGACGTGTACTTGTTTGCTGATTTTCTTTTGCTAGAATCATGTATTTATTTTTTACATAAGCGTTTGTTTTATCAGGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCGAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGGTGCCCTAGCTGCCTTTCACTTCCTGGAGGCGCAATTTGTCTATATTTATATTTCAAAAAGCATTTATGAAAATAGCATGAGAATATAATACGTAATAGTTATGATGGTCTATTCTTAAAATCATAAAAACAAAAGTTGCAAAAAAAGAAATAGGCCACAACATTCTAGATGCCATATTTAACAAAGATAAAACTATTCCAGATTTAGGAAGTGCTGAAAGGTCGTGAAAACATTATTTTATTGTCATCGTGACAATTCTATAGAGGTTAAATGCAGACATGTTTTGCATTCTGATTTTTTCTCAATGCATTCATTTCAATAAGACTTTTTAAAATGTATTTGCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGACAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAGGAGAGAAGCTGCCTTTGTTCCTCCTAAGGTATACATTGCTGCGGCTTCTTGATTCAGCTTATCCAATATGTTGATCATTTTCATTCTTTATACTACCGTACGTGCTCTAATGCTTTTAGTGATAATTGTTTTACCTCAATTCAGGAGGCACCGGAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGCCTTGAAGGTATGGGATTGTGTGTGGGCTATACGTATATAGCTGTGGATGCTCCAAGAAGATTTTTTTTTTTTAACTGGACAGGGTCCAATTTGTTTGATAAATTTGTTGCAACTTATATGATGTCGTTGCTTTGCAGGAAAAGGCTAAGGCATTTGGAAAACGTAAAGCTGCGGAAACTATCAATCCAGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCATCGTAG

mRNA sequence

ATGGAGGACATAGAGCAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCCAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGGTGGTCTCCTCGAAGTCAGCTCTTTCTCTACTCTCTTTCCCGTGTACAGAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTACAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATTAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCGAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGACAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAGGAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGGCACCGGAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGCCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGTAAAGCTGCGGAAACTATCAATCCAGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCATCGTAG

Coding sequence (CDS)

ATGGAGGACATAGAGCAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCCAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGGTGGTCTCCTCGAAGTCAGCTCTTTCTCTACTCTCTTTCCCGTGTACAGAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTACAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATTAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCGAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGACAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAGGAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGGCACCGGAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGCCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGTAAAGCTGCGGAAACTATCAATCCAGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCATCGTAG

Protein sequence

MEDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKTAENKRRREAAFVPPKEAPEQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAYIASSSDRPLFKKRSKTSS

Homology

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BLAST of PI0013079 vs. ExPASy Swiss-Prot
Match: O74777 (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mis3 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.9e-97
Identity = 186/314 (59.24%), Postives = 242/314 (77.07%), Query Frame = 0


Query: 9   NKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYREKYLRDTW 68
           NK K   ++ + KPWD D +ID WK+E F    ++   LE SSF+TLFP YREKYLR+ W
Sbjct: 15  NKNK---RYRRDKPWDTD-DIDHWKIEPFTKDDSKESFLEESSFATLFPKYREKYLREVW 74

Query: 69  PVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKIL 128
           P V  AL +FGI   L+L+EGSMTV TTRKT DPY I+ ARDLIKLL+RSVP PQA+KI+
Sbjct: 75  PHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSVPFPQAVKIM 134

Query: 129 DDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSF 188
            D + CDIIKIGN++R KERFVKRR+ L+G N  TLKALE+LT CYILVQG TVA MG +
Sbjct: 135 QDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQGTTVAVMGGY 194

Query: 189 KGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV-KQK 248
           KGLK+VRR+VE+CM N +HP+Y+IK LM+K+ELA DP LANE+WDRFLP+FKK+ V ++K
Sbjct: 195 KGLKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRK 254

Query: 249 KVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKTAENKRR 308
             K +  K+YTPFPP Q PS++D+++E+GEYFL  ++K  KK  +K+E+Q EK  E ++ 
Sbjct: 255 PAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKE 314

Query: 309 REAAFVPPKEAPEQ 322
           R  AF+PP+E+ ++
Sbjct: 315 RMKAFIPPEESSKK 323

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BLAST of PI0013079 vs. ExPASy Swiss-Prot
Match: B3LU25 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 9.9e-94
Identity = 183/306 (59.80%), Postives = 230/306 (75.16%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEGG--LLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N  G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 RRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 256
           RRVVE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 257 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKTAENKRRREAA 316
             KK YTPFPP Q P ++D+++E+GEYFL+ ++K  KK  +++EKQ E+  E +  R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 317 FVPPKE 318
           F+ P+E
Sbjct: 305 FIAPEE 308

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BLAST of PI0013079 vs. ExPASy Swiss-Prot
Match: B5VEQ2 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 9.9e-94
Identity = 183/306 (59.80%), Postives = 230/306 (75.16%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEGG--LLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N  G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 RRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 256
           RRVVE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 257 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKTAENKRRREAA 316
             KK YTPFPP Q P ++D+++E+GEYFL+ ++K  KK  +++EKQ E+  E +  R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 317 FVPPKE 318
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of PI0013079 vs. ExPASy Swiss-Prot
Match: C8Z430 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) OX=643680 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 9.9e-94
Identity = 183/306 (59.80%), Postives = 230/306 (75.16%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEGG--LLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N  G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 RRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 256
           RRVVE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 257 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKTAENKRRREAA 316
             KK YTPFPP Q P ++D+++E+GEYFL+ ++K  KK  +++EKQ E+  E +  R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 317 FVPPKE 318
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of PI0013079 vs. ExPASy Swiss-Prot
Match: P25586 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KRR1 PE=1 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 9.9e-94
Identity = 183/306 (59.80%), Postives = 230/306 (75.16%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEGG--LLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N  G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 RRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 256
           RRVVE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 257 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKTAENKRRREAA 316
             KK YTPFPP Q P ++D+++E+GEYFL+ ++K  KK  +++EKQ E+  E +  R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 317 FVPPKE 318
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of PI0013079 vs. ExPASy TrEMBL
Match: A0A0A0K7G6 (KRR1 small subunit processome component OS=Cucumis sativus OX=3659 GN=Csa_7G237820 PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 1.6e-203
Identity = 369/379 (97.36%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 1   MEDIE-QHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVY 60
           MEDIE QHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE G+LEVSSFSTLFPVY
Sbjct: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTV+TTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKF 240
           NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLN+KKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTAENKRRREAAFVPPKEAPEQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           KTA+NKR+REAAFVPPKEAP+QDTKPDGDKNDIAEMAK+LKEKAKAFGKRKAAETINPEA
Sbjct: 301 KTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDRPLFKKRSKTSS 379
           YIASSSDRPLFKKRSKTSS
Sbjct: 361 YIASSSDRPLFKKRSKTSS 379

[Close]

BLAST of PI0013079 vs. ExPASy TrEMBL
Match: A0A5D3CP78 (KRR1 small subunit processome component OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00300 PE=3 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 7.9e-203
Identity = 369/379 (97.36%), Postives = 376/379 (99.21%), Query Frame = 0


Query: 1   MEDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYR 60
           MEDIEQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE G+LEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTV+TTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLN+KKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRRREAAFVPPKEAP-EQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKR+REAAFVPPKEAP +QDT+PDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDRPLFKKRSKTSS 379
           YIASSSD+PLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of PI0013079 vs. ExPASy TrEMBL
Match: A0A1S3BGN7 (KRR1 small subunit processome component OS=Cucumis melo OX=3656 GN=LOC103489650 PE=3 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.1e-201
Identity = 367/379 (96.83%), Postives = 374/379 (98.68%), Query Frame = 0


Query: 1   MEDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYR 60
           MEDIEQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE G+LEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTV+TTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLN+KKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRRREAAFVPPKEAP-EQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKR+REAAFVPP EAP +QDT+PDGDKNDIAEMAK LKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDRPLFKKRSKTSS 379
           YIASSSD+PLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of PI0013079 vs. ExPASy TrEMBL
Match: A0A6J1HWB5 (KRR1 small subunit processome component OS=Cucurbita maxima OX=3661 GN=LOC111468435 PE=3 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.3e-189
Identity = 345/377 (91.51%), Postives = 360/377 (95.49%), Query Frame = 0


Query: 2   EDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYRE 61
           E+IEQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGG+LEVSSFSTLFPVYRE
Sbjct: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  ELNL+EGSMTV+TTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALA+ENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALASENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL+DKKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRRREAAFVPPKEAPEQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAYI 361
           AENKR+REA+FVPPKE P+QDTK DGD NDIA MAKALKEKAKA GKRKAAE+INPEAYI
Sbjct: 304 AENKRKREASFVPPKETPKQDTKIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAYI 363

Query: 362 ASSSDRPLFKKRSKTSS 379
           A SSD+  FKKRSK SS
Sbjct: 364 ALSSDQKHFKKRSKASS 380

[Close]

BLAST of PI0013079 vs. ExPASy TrEMBL
Match: A0A6J1GLG6 (KRR1 small subunit processome component OS=Cucurbita moschata OX=3662 GN=LOC111455438 PE=3 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 2.9e-189
Identity = 345/377 (91.51%), Postives = 359/377 (95.23%), Query Frame = 0


Query: 2   EDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYRE 61
           E+IEQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNEGG+LEVSSFSTLFPVYRE
Sbjct: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  +LNL+EGSMTV+TTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL+DKKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRRREAAFVPPKEAPEQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAYI 361
           AENKR+REAAFVPPKE P+QDT  DGD NDIA MAKALKEKAKA GKRKAAE+INPEAYI
Sbjct: 304 AENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAYI 363

Query: 362 ASSSDRPLFKKRSKTSS 379
           ASSSD+  FKKRSK SS
Sbjct: 364 ASSSDQKHFKKRSKASS 380

[Close]

BLAST of PI0013079 vs. NCBI nr
Match: XP_004139889.2 (KRR1 small subunit processome component homolog [Cucumis sativus] >XP_031744202.1 KRR1 small subunit processome component homolog [Cucumis sativus] >KGN44267.1 hypothetical protein Csa_015861 [Cucumis sativus])

HSP 1 Score: 718.4 bits (1853), Expect = 3.3e-203
Identity = 369/379 (97.36%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 1   MEDIE-QHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVY 60
           MEDIE QHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE G+LEVSSFSTLFPVY
Sbjct: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTV+TTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKF 240
           NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLN+KKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTAENKRRREAAFVPPKEAPEQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           KTA+NKR+REAAFVPPKEAP+QDTKPDGDKNDIAEMAK+LKEKAKAFGKRKAAETINPEA
Sbjct: 301 KTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDRPLFKKRSKTSS 379
           YIASSSDRPLFKKRSKTSS
Sbjct: 361 YIASSSDRPLFKKRSKTSS 379

[Close]

BLAST of PI0013079 vs. NCBI nr
Match: KAA0056531.1 (KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa] >TYK12099.1 KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 716.1 bits (1847), Expect = 1.6e-202
Identity = 369/379 (97.36%), Postives = 376/379 (99.21%), Query Frame = 0


Query: 1   MEDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYR 60
           MEDIEQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE G+LEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTV+TTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLN+KKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRRREAAFVPPKEAP-EQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKR+REAAFVPPKEAP +QDT+PDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDRPLFKKRSKTSS 379
           YIASSSD+PLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of PI0013079 vs. NCBI nr
Match: XP_008447125.1 (PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo])

HSP 1 Score: 712.2 bits (1837), Expect = 2.3e-201
Identity = 367/379 (96.83%), Postives = 374/379 (98.68%), Query Frame = 0


Query: 1   MEDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYR 60
           MEDIEQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE G+LEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTV+TTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLN+KKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRRREAAFVPPKEAP-EQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKR+REAAFVPP EAP +QDT+PDGDKNDIAEMAK LKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDRPLFKKRSKTSS 379
           YIASSSD+PLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of PI0013079 vs. NCBI nr
Match: XP_038888683.1 (KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888684.1 KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888685.1 KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888686.1 KRR1 small subunit processome component homolog [Benincasa hispida])

HSP 1 Score: 697.6 bits (1799), Expect = 6.0e-197
Identity = 360/378 (95.24%), Postives = 367/378 (97.09%), Query Frame = 0


Query: 1   MEDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYR 60
           MEDIEQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGG+LEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLR+TWPVVKSALKEFGIV ELNLIEGSMTV+TTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRETWPVVKSALKEFGIVCELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSK KK YTPFPPPQQPSQIDIQLETGEYFL+DKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKQKKPYTPFPPPQQPSQIDIQLETGEYFLSDKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRRREAAFVPPKEAPEQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAY 360
           TAENKR+REAAFVPPKE P QDT+PD D NDI+EMAKALKEKAKAFGKRKA E INPEAY
Sbjct: 301 TAENKRKREAAFVPPKEPPMQDTEPDQDNNDISEMAKALKEKAKAFGKRKAMEAINPEAY 360

Query: 361 IASSSDRPLFKKRSKTSS 379
           IASSSDRP FKKRSKTSS
Sbjct: 361 IASSSDRPHFKKRSKTSS 378

[Close]

BLAST of PI0013079 vs. NCBI nr
Match: XP_022969421.1 (KRR1 small subunit processome component homolog [Cucurbita maxima] >XP_022969422.1 KRR1 small subunit processome component homolog [Cucurbita maxima])

HSP 1 Score: 672.2 bits (1733), Expect = 2.7e-189
Identity = 345/377 (91.51%), Postives = 360/377 (95.49%), Query Frame = 0


Query: 2   EDIEQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYRE 61
           E+IEQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGG+LEVSSFSTLFPVYRE
Sbjct: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  ELNL+EGSMTV+TTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALA+ENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALASENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL+DKKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRRREAAFVPPKEAPEQDTKPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAYI 361
           AENKR+REA+FVPPKE P+QDTK DGD NDIA MAKALKEKAKA GKRKAAE+INPEAYI
Sbjct: 304 AENKRKREASFVPPKETPKQDTKIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAYI 363

Query: 362 ASSSDRPLFKKRSKTSS 379
           A SSD+  FKKRSK SS
Sbjct: 364 ALSSDQKHFKKRSKASS 380

[Close]

BLAST of PI0013079 vs. TAIR 10
Match: AT5G08420.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 511.1 bits (1315), Expect = 7.4e-145
Identity = 263/373 (70.51%), Postives = 311/373 (83.38%), Query Frame = 0


Query: 8   QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGLLEVSSFSTLFPVYREKYLRDT 67
           + + K KGKH+KPKPWD+DPNIDRW +EKFDP+WN  G+ E S+FSTLFP YREKYL++ 
Sbjct: 15  EKREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLFPQYREKYLQEC 74

Query: 68  WPVVKSALKEFGIVGELNLIEGSMTVTTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI 127
           WP V+SALKE+G+  +LNL+EGSMTV+TTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI
Sbjct: 75  WPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI 134

Query: 128 LDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGS 187
           L+DE+QCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEILT CYILVQG+TVAAMG 
Sbjct: 135 LEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYILVQGSTVAAMGP 194

Query: 188 FKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTVKQK 247
           FKGLKQ+RR+VE+C+ N MHPVY+IK LMMKKEL  DPALANE+WDRFLP F+KK VKQK
Sbjct: 195 FKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWDRFLPTFRKKNVKQK 254

Query: 248 KVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNDKKKSAKKWQDKQEKQAEKTAENKRR 307
           K KSK KK YTPFPPPQ PS+ID+QLE+GEYF++DKKKS KKWQ+KQEKQ+EK+ ENKR+
Sbjct: 255 KPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEKSTENKRK 314

Query: 308 REAAFVPPKEAPEQDT---KPDGDKNDIAEMAKALKEKAKAFGK-RKAAETINPEAYIAS 367
           R+A+F+PP+E    ++   K +  KNDI E+  +LK K K   K +K  E +N E YIA 
Sbjct: 315 RDASFLPPEEPMNNNSNANKSEDGKNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAG 374

Query: 368 -SSDRPLFKKRSK 376
            SS      K+SK
Sbjct: 375 PSSSADKSSKKSK 387

The following BLAST results are available for this feature:

BLAST of PI0013079 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74777	1.9e-97	59.24	KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (st...	[more]
B3LU25	9.9e-94	59.80	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11...	[more]
B5VEQ2	9.9e-94	59.80	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI...	[more]
C8Z430	9.9e-94	59.80	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalv...	[more]
P25586	9.9e-94	59.80	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC...	[more]

BLAST of PI0013079 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7G6	1.6e-203	97.36	KRR1 small subunit processome component OS=Cucumis sativus OX=3659 GN=Csa_7G2378...	[more]
A0A5D3CP78	7.9e-203	97.36	KRR1 small subunit processome component OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BGN7	1.1e-201	96.83	KRR1 small subunit processome component OS=Cucumis melo OX=3656 GN=LOC103489650 ...	[more]
A0A6J1HWB5	1.3e-189	91.51	KRR1 small subunit processome component OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]
A0A6J1GLG6	2.9e-189	91.51	KRR1 small subunit processome component OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of PI0013079 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139889.2	3.3e-203	97.36	KRR1 small subunit processome component homolog [Cucumis sativus] >XP_031744202....	[more]
KAA0056531.1	1.6e-202	97.36	KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa] ...	[more]
XP_008447125.1	2.3e-201	96.83	PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo]	[more]
XP_038888683.1	6.0e-197	95.24	KRR1 small subunit processome component homolog [Benincasa hispida] >XP_03888868...	[more]
XP_022969421.1	2.7e-189	91.51	KRR1 small subunit processome component homolog [Cucurbita maxima] >XP_022969422...	[more]

BLAST of PI0013079 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08420.1	7.4e-145	70.51	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041174	Krr1, KH1 domain	PFAM	PF17903	KH_8	coord: 50..130 e-value: 1.1E-29 score: 102.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 131..234 e-value: 8.8E-49 score: 165.7
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 44..130 e-value: 1.9E-40 score: 138.7
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 131..235
IPR024166	Ribosomal RNA assembly KRR1	PIRSF	PIRSF006515	KRR1	coord: 1..353 e-value: 1.1E-152 score: 505.9
IPR024166	Ribosomal RNA assembly KRR1	PANTHER	PTHR12581	HIV-1 REV BINDING PROTEIN 2, 3	coord: 2..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..378
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013079.1	PI0013079.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003723	RNA binding