PI0013051 (gene) Melon (PI 482460) v1

Overview


Name	PI0013051
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrovirus-related Pol polyprotein from transposon 17.6
Location	chr06: 17693892 .. 17694287 (-)
RNA-Seq Expression	PI0013051
Synteny	PI0013051

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATCTTCTCAGACTTTCTAGAGAGATCAGTTGAGATTTTCATGGATGATTTTTCTGTATTTGGAAATTCCTTCAAAGAATGTCTGGGCAACTTAGAAGAAGTTTTGGAGAAATGTGAAGAGACACGACTCGTTTTGAACTGGGAGAAGTGTCACTTCATGGTTAAAGAAGGAATTGTGCTTGGGCACAAGATCTCCGAGGCGGGATTAGAAGTGGACCCTTCGAAAATTGATGTGGTTAGCAAGCTACCATCGTTTACTGATGTCAAACCCTTGAGAAGTTTCTTAGGCCATGCTGGTTCATATAGAAGGTTCATCAAGGGATTCTCTCAAATTCCAAAGCTGCTCAAGAATCTACTATGCGCTATGCGCCAATCAACCATATCATTTTGA

mRNA sequence

ATGGCGATCTTCTCAGACTTTCTAGAGAGATCAGTTGAGATTTTCATGGATGATTTTTCTGTATTTGGAAATTCCTTCAAAGAATGTCTGGGCAACTTAGAAGAAGTTTTGGAGAAATGTGAAGAGACACGACTCGTTTTGAACTGGGAGAAGTGTCACTTCATGGTTAAAGAAGGAATTGTGCTTGGGCACAAGATCTCCGAGGCGGGATTAGAAGTGGACCCTTCGAAAATTGATGTGGTTAGCAAGCTACCATCGTTTACTGATGTCAAACCCTTGAGAAGTTTCTTAGGCCATGCTGGTTCATATAGAAGGTTCATCAAGGGATTCTCTCAAATTCCAAAGCTGCTCAAGAATCTACTATGCGCTATGCGCCAATCAACCATATCATTTTGA

Coding sequence (CDS)

ATGGCGATCTTCTCAGACTTTCTAGAGAGATCAGTTGAGATTTTCATGGATGATTTTTCTGTATTTGGAAATTCCTTCAAAGAATGTCTGGGCAACTTAGAAGAAGTTTTGGAGAAATGTGAAGAGACACGACTCGTTTTGAACTGGGAGAAGTGTCACTTCATGGTTAAAGAAGGAATTGTGCTTGGGCACAAGATCTCCGAGGCGGGATTAGAAGTGGACCCTTCGAAAATTGATGTGGTTAGCAAGCTACCATCGTTTACTGATGTCAAACCCTTGAGAAGTTTCTTAGGCCATGCTGGTTCATATAGAAGGTTCATCAAGGGATTCTCTCAAATTCCAAAGCTGCTCAAGAATCTACTATGCGCTATGCGCCAATCAACCATATCATTTTGA

Protein sequence

MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGIVLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNLLCAMRQSTISF

Homology

[Close]

BLAST of PI0013051 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.2e-15
Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 3   IFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGIVL 62
           I    L +   +++DD  VF  S  E L +L  V EK  +  L L  +KC F+ +E   L
Sbjct: 352 ILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFL 411

Query: 63  GHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNLL 122
           GH ++  G++ +P KI+ + K P  T  K +++FLG  G YR+FI  F+ I K +   L
Sbjct: 412 GHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCL 470

[Close]

BLAST of PI0013051 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 45/117 (38.46%), Postives = 57/117 (48.72%), Query Frame = 0


Query: 4   FSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGIVLG 63
           FS        ++MDD  V G S K  L NL EV  KC E  L L+ EKC F + E   LG
Sbjct: 461 FSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLG 520

Query: 64  HKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 121
           HK ++ G+  D  K DV+   P   D    R F+     YRRFIK F+   + +  L
Sbjct: 521 HKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRL 577

[Close]

BLAST of PI0013051 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13
Identity = 38/119 (31.93%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 3   IFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGIVL 62
           I    L +   +++DD  +F  S  E L +++ V  K  +  L L  +KC F+ KE   L
Sbjct: 351 ILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFL 410

Query: 63  GHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNLL 122
           GH ++  G++ +P K+  +   P  T  K +R+FLG  G YR+FI  ++ I K + + L
Sbjct: 411 GHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCL 469

[Close]

BLAST of PI0013051 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.7e-08
Identity = 31/108 (28.70%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 14  IFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGIVLGHKISEAGLEV 73
           +++DD  +F  +  + + +++ VL+   +  + ++ EK  F  +    LG  +S+ G + 
Sbjct: 338 VYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKS 397

Query: 74  DPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNLL 122
           DP K+  + + P    V  +RSFLG A  YR FIK F+ I + + ++L
Sbjct: 398 DPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDIL 445

[Close]

BLAST of PI0013051 vs. ExPASy Swiss-Prot
Match: P92523 (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.4e-08
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 30  LGNLEEVLEKCEETRLVLNWEKCHFMVKEGIVLGHK--ISEAGLEVDPSKIDVVSKLPSF 89
           + +L  VL+  E+ +   N +KC F   +   LGH+  IS  G+  DP+K++ +   P  
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 90  TDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNLL 122
            +   LR FLG  G YRRF+K + +I + L  LL
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELL 94

[Close]

BLAST of PI0013051 vs. ExPASy TrEMBL
Match: A0A5D3C2W5 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002100 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43
Identity = 95/120 (79.17%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           MAIFSDFLERSVEIFMDDFSVFG+SF+E + NLEEVLEKCEETRLVLNW+KCHFMV+EGI
Sbjct: 13  MAIFSDFLERSVEIFMDDFSVFGDSFRERVNNLEEVLEKCEETRLVLNWKKCHFMVREGI 72

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLG+KI EAGL       DVV+KLP  T VKPL SFLGHAG YRRFIKGFSQI K L NL
Sbjct: 73  VLGYKIFEAGL-------DVVNKLPPLTVVKPLSSFLGHAGFYRRFIKGFSQIAKPLSNL 125

[Close]

BLAST of PI0013051 vs. ExPASy TrEMBL
Match: A0A2U1NRI2 (Reverse transcriptase OS=Artemisia annua OX=35608 GN=CTI12_AA230240 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.7e-43
Identity = 86/121 (71.07%), Postives = 104/121 (85.95%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           +AIF D +E SVE+FMDDFSVFGNSF +CL NL+++L++CE+T LVLNWEKCHFMVKEGI
Sbjct: 854 IAIFHDMIEESVEVFMDDFSVFGNSFDKCLSNLDKMLQRCEDTNLVLNWEKCHFMVKEGI 913

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLGHK+S AGLEVD +K+DV+SKLP  T+VK +RSFLGHAG YRRFIK FS+I + L  L
Sbjct: 914 VLGHKVSGAGLEVDKAKVDVISKLPPPTNVKGIRSFLGHAGFYRRFIKDFSKIARPLTKL 973

Query: 121 L 122
           L
Sbjct: 974 L 974

[Close]

BLAST of PI0013051 vs. ExPASy TrEMBL
Match: A0A6P6SU28 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113694771 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 86/122 (70.49%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           MAIFSD++E+ +EIFMDDFSV+G+SF +CL NLE +L++CEET LVLNWEKCHFMVKEGI
Sbjct: 731 MAIFSDYIEKIMEIFMDDFSVYGSSFDQCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 790

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLGHKIS  G+EVD +KI+V+ KLP  ++VK +RSFLGHAG YRRFIK FS+I K L +L
Sbjct: 791 VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHAGFYRRFIKDFSKIVKPLCDL 850

Query: 121 LC 123
           LC
Sbjct: 851 LC 852

[Close]

BLAST of PI0013051 vs. ExPASy TrEMBL
Match: A0A6P6X9H2 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113741122 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42
Identity = 86/122 (70.49%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1    MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
            MAIFSD++E+ +EIFMDDFSV+G+SF  CL NLE +L++CEET LVLNWEKCHFMVKEGI
Sbjct: 935  MAIFSDYIEKIMEIFMDDFSVYGSSFDHCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 994

Query: 61   VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
            VLGHKIS  G+EVD +KI+V+ KLP  ++VK +RSFLGHAG YRRFIK FS+I K L +L
Sbjct: 995  VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHAGFYRRFIKDFSRIVKPLCDL 1054

Query: 121  LC 123
            LC
Sbjct: 1055 LC 1056

[Close]

BLAST of PI0013051 vs. ExPASy TrEMBL
Match: A0A6P6TF62 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113700883 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42
Identity = 86/122 (70.49%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           MAIFSD++E+ +EIFMDDFSV+G+SF  CL NLE +L++CEET LVLNWEKCHFMVKEGI
Sbjct: 863 MAIFSDYIEKIMEIFMDDFSVYGSSFDHCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 922

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLGHKIS  G+EVD +KI+V+ KLP  ++VK +RSFLGHAG YRRFIK FS+I K L +L
Sbjct: 923 VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHAGFYRRFIKDFSRIVKPLCDL 982

Query: 121 LC 123
           LC
Sbjct: 983 LC 984

[Close]

BLAST of PI0013051 vs. NCBI nr
Match: WP_217833188.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 191.8 bits (486), Expect = 3.7e-45
Identity = 92/126 (73.02%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           MAIFSD+LE+SVE+FMDDFSVFG S+ ECL NLE VL++CE+T LVLNWEKCHFMV EGI
Sbjct: 2   MAIFSDYLEQSVEVFMDDFSVFGKSYDECLTNLERVLKRCEDTNLVLNWEKCHFMVTEGI 61

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLGHKIS+ GLEVD ++ID ++KLP+ T+VK LRSFLGHAG YRRFIKGFSQ+ K L  L
Sbjct: 62  VLGHKISKVGLEVDQAEIDAIAKLPAPTNVKTLRSFLGHAGFYRRFIKGFSQVAKPLSEL 121

Query: 121 LCAMRQ 127
           L A R+
Sbjct: 122 LEANRE 127

[Close]

BLAST of PI0013051 vs. NCBI nr
Match: XP_038894606.1 (uncharacterized mitochondrial protein AtMg00860-like [Benincasa hispida])

HSP 1 Score: 186.4 bits (472), Expect = 1.5e-43
Identity = 88/125 (70.40%), Postives = 107/125 (85.60%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           MAIFSDFLE++VE+FM+DFSVFG+SF+ CL NLE +L +CEET LVLNW+KCHFM+ EGI
Sbjct: 1   MAIFSDFLEKTVEVFMNDFSVFGDSFQSCLDNLEAILTRCEETNLVLNWKKCHFMMTEGI 60

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLGHK+S+AGLEVD +KIDV++KLP  ++VK LRSFLGH G YRRF+KGFSQI + L  L
Sbjct: 61  VLGHKVSKAGLEVDEAKIDVIAKLPPSSNVKALRSFLGHVGFYRRFVKGFSQIARPLSAL 120

Query: 121 LCAMR 126
           L A R
Sbjct: 121 LEANR 125

[Close]

BLAST of PI0013051 vs. NCBI nr
Match: XP_021994444.1 (uncharacterized protein LOC110891080 [Helianthus annuus])

HSP 1 Score: 185.3 bits (469), Expect = 3.5e-43
Identity = 85/121 (70.25%), Postives = 104/121 (85.95%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           +AIF D +E S+E+FMDDFSVFG+SF +CLGNL+ +L +CEET LVLNWEKCHFMVKEG+
Sbjct: 402 VAIFHDMIEDSMEVFMDDFSVFGSSFDQCLGNLKRMLMRCEETNLVLNWEKCHFMVKEGV 461

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLGHKISEAGLEVDP+K+D++SKLP  T V+ +RSFLGHAG YRRFIK FS+I + +  L
Sbjct: 462 VLGHKISEAGLEVDPAKVDIISKLPPPTSVRAIRSFLGHAGFYRRFIKDFSKIARPMTRL 521

Query: 121 L 122
           L
Sbjct: 522 L 522

[Close]

BLAST of PI0013051 vs. NCBI nr
Match: XP_022003438.1 (uncharacterized protein LOC110900888 [Helianthus annuus])

HSP 1 Score: 185.3 bits (469), Expect = 3.5e-43
Identity = 85/121 (70.25%), Postives = 104/121 (85.95%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           +AIF D +E S+E+FMDDFSVFG+SF +CLGNL+ +L +CEET LVLNWEKCHFMVKEG+
Sbjct: 513 VAIFHDMIEDSMEVFMDDFSVFGSSFDQCLGNLKRMLMRCEETNLVLNWEKCHFMVKEGV 572

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLGHKISEAGLEVDP+K+D++SKLP  T V+ +RSFLGHAG YRRFIK FS+I + +  L
Sbjct: 573 VLGHKISEAGLEVDPAKVDIISKLPPPTSVRAIRSFLGHAGFYRRFIKDFSKIARPMTRL 632

Query: 121 L 122
           L
Sbjct: 633 L 633

[Close]

BLAST of PI0013051 vs. NCBI nr
Match: TYK05725.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 3.5e-43
Identity = 95/120 (79.17%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 1   MAIFSDFLERSVEIFMDDFSVFGNSFKECLGNLEEVLEKCEETRLVLNWEKCHFMVKEGI 60
           MAIFSDFLERSVEIFMDDFSVFG+SF+E + NLEEVLEKCEETRLVLNW+KCHFMV+EGI
Sbjct: 13  MAIFSDFLERSVEIFMDDFSVFGDSFRERVNNLEEVLEKCEETRLVLNWKKCHFMVREGI 72

Query: 61  VLGHKISEAGLEVDPSKIDVVSKLPSFTDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNL 120
           VLG+KI EAGL       DVV+KLP  T VKPL SFLGHAG YRRFIKGFSQI K L NL
Sbjct: 73  VLGYKIFEAGL-------DVVNKLPPLTVVKPLSSFLGHAGFYRRFIKGFSQIAKPLSNL 125

[Close]

BLAST of PI0013051 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-09
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 30  LGNLEEVLEKCEETRLVLNWEKCHFMVKEGIVLGHK--ISEAGLEVDPSKIDVVSKLPSF 89
           + +L  VL+  E+ +   N +KC F   +   LGH+  IS  G+  DP+K++ +   P  
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 90  TDVKPLRSFLGHAGSYRRFIKGFSQIPKLLKNLL 122
            +   LR FLG  G YRRF+K + +I + L  LL
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELL 94

The following BLAST results are available for this feature:

BLAST of PI0013051 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	9.2e-15	35.29	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P10394	1.2e-14	38.46	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
P20825	1.7e-13	31.93	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P10401	3.7e-08	28.70	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
P92523	6.4e-08	35.11	Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of PI0013051 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2W5	1.7e-43	79.17	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. mak...	[more]
A0A2U1NRI2	3.7e-43	71.07	Reverse transcriptase OS=Artemisia annua OX=35608 GN=CTI12_AA230240 PE=4 SV=1	[more]
A0A6P6SU28	1.1e-42	70.49	Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113694771 PE=4 SV=1	[more]
A0A6P6X9H2	1.8e-42	70.49	Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113741122 PE=4 SV=1	[more]
A0A6P6TF62	1.8e-42	70.49	Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113700883 PE=4 SV=1	[more]

BLAST of PI0013051 vs. NCBI nr


Match Name	E-value	Identity	Description
WP_217833188.1	3.7e-45	73.02	hypothetical protein, partial [Synechococcus sp. PCC 7002]	[more]
XP_038894606.1	1.5e-43	70.40	uncharacterized mitochondrial protein AtMg00860-like [Benincasa hispida]	[more]
XP_021994444.1	3.5e-43	70.25	uncharacterized protein LOC110891080 [Helianthus annuus]	[more]
XP_022003438.1	3.5e-43	70.25	uncharacterized protein LOC110900888 [Helianthus annuus]	[more]
TYK05725.1	3.5e-43	79.17	Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuw...	[more]

BLAST of PI0013051 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.5e-09	35.11	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 76..130 e-value: 6.6E-11 score: 44.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..72 e-value: 2.3E-20 score: 74.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 11..65 e-value: 4.2E-7 score: 29.7
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 11..121
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 11..121
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013051.1	PI0013051.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity