PI0013018 (gene) Melon (PI 482460) v1

Overview


Name	PI0013018
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	CHCH domain-containing protein
Location	chr03: 2848868 .. 2853801 (+)
RNA-Seq Expression	PI0013018
Synteny	PI0013018

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGTTGTGAAAACAGAAAAGAGGTATAAACAGTGTATAATATAATTGCATTTCGAAGTTGTTGGCTGAAAAGAGAATTAGGAGGTGAATGGTGGTGGCTTATGACTTGTTGAGTTGCTATATTGTTTATAAAATTACTGTACAGTCGTAAATCACTAAAAGAAATTGCTTCCGCAGTTGAAATTTTGTCTACCTGTTTCTCTGTCTCCCTTTGTTTTATATCTTTAGAGAGAGAGAGGACAAAGAAGAGCACCTTTATTCTATTATTATGTAGATTCTTAGTTTATTATTATTATTATTTTTGTTCATGATGATTTGTCAATGCAACAAACTGGATTGTACAATTCTTGCTTTTGTTTCCCTTAGTTCATTAGTTTGATCTGTTGAGAAAATAAGGATATCGGGGGCCATCCGTACAAATCTACAAAATACATATTCTGTTCCTTTTTGTCCAACGTTCAAATTCCATTTCAATTTATCTGTTTTCTTTAATATTGTCGATGTTAAAGTTATCCTAATTTAAGTCTTAGTGTTTAATTAGTTTTGAATAATTTAATTGTTAACATCTTTCATCTGATTTCATATCTAAATAATCTTTTTAATGTTCAAAATATTTATTTTGGTTCCTATGTGTTTTTTTGGTCATTTTGGTCCCTTCGGTCCAATCTAGGTAGGCGTAAATTTTGGAAAGATTAGGGATAATGGAAAGTTCAAAATGAATTGCATGTGTCCATTGTTTTTTTTTACTTTTTTATTTTTTATTTTTTTGTTAATTTTCAACGGTAAAGTATACTTCAAAAAAAAAAAAATTGCAAATATAGCAAATATAGTTAAATTTATCATCGATAGACTATTATGATGATAAATCAATATTTACAATATGGTCTATTAATAATAGATTTTTATCATTGGCAAATTTTAAAAGTCGTGAAATAGTACAAAATTTACTCCTGGTAATCGTTGTAATATTCAATAGTTGTTATTTATGATCATTAATGAACTTATAATATTCAAAATTAATTTTAACTCTCTAATCTAATCAATACTGGGGTTTATGTTTATCATTTTGTAAAGAAAATTACGTGTAAACATAATAATACTATATCACGATTGAGATTAATTTATTTGCATTATTATTTGGTATTATTGTTTTTTATCGTTTCAACAATATCGTTAAGAGTAACTTTAATAAATTCTTAAATCTTTTACTATACTATTAATGGTATCTTTAATGGTAACAATATCTAATTGTGAGTCAAACATGATTTCTAAATACAATTGATTGTGGAGAAGAACAATTGATTGGATCAATTTCATCTCCACAATGGACAATTGGATATACTAATGTCAGAATGGACGAATAAACATGGTTCATGTAACTTTCAATATTTATATATGTAATCTAACTATTTTGTATTCAGGGGAAAGAACATTCGAGAATAGTTCGTTGGTCTCATCTAGGTTCGCTTGTGGTGCAAAAAGAGGAAAATAGAACCACGTGGCCATCTCCAATTGGTAGATTACGTGATTTTTGTATTTGTCAACTCGCTGTTTAGAAAACTAAACGGAAACTCCTAGAATCTGGGTCCCTATATAAACCCCAATAAAGTGGAATTCGACCGCAAATTAGTAACCCTAAAATTTCAGATCTCATTACTGCAAGAGACATCTACCGCCATTCTTTTACTTTTCTTCTACGCAGTCGCCCTATCTTATAATCCTTAACCATGCCTCGTCGTAGCTCCGGTGGTTAGTATTTCGTACATTTCTCCTTCATATCTTTCTAGCGACTAGTTATTCCTTTTTTCAGATTGATTTCATCCGGCCAGATTTTGTTTCCGGTTCTTTTTTCCTCGTTTATCTACCTACTTATATTTCTGGCGATGGCTTTTGTATGAAGAGTTCGATTGGGTTTCTGGCTTAGGGAAGTTCTTGATTTTTTGGATCTGATTTACGACAAGATTGTTAATTTTTTTTTTTTTGGGTTGGGGGGGGGGGGGGGGGGACAAAACTAGGGTTTGAAGTTGGAGCGTTTATATGCTTTAGGTTTTAGAAATTTATGTGATTGCGATAAATATTCGAGCTTTGTTACTTATTTAATCTCTCTGATTCTCGTGGTAAGTGGTTGACCTTGGATTATTTTGCAGGACGATCTGCTCCCCGTCCCGCCCCTCGCGCTCCTCTTCGCAATCCACCGGCGCCAGGTAAAATACGACGATTTTTATATGATTTAGATTAGTTATCTATTTTCAAGACCTCATTTGGGGGAGCAATGTTGAATTTGTCTGGTAGCCGTTATGAGGGTCTGTGTTTTAGTATGTACATATGTTTATCCTCTTCATATTCACGGTGGACTGGATTCCAGTCCGGCCTCCTTGTATATGTGCCTTACCCAAGGCATCTTTTGATGTCATTAGAAACACCCTCTAGTTTTCTTAGCTGAAGATTTTGGTTTGATAAATTATGGCGTACTAAAGGAATTTGGTAACAAGGATTCGGTGGAAAGAGTTGAATTCATTCCAATTTAAACTTTTGCTCGCATATGTTCAATGATATATTTATAAACCATGAAACAGTTGTAGTTGCCAACTAAAGATTAGGTTCGATCTCAACTATTTCTGAACATGTCTTATGTAATAAATTTTGTATAATTAGTTATTATACCATATTATATATATTTTTTTGTGTAGGAAACAGAAACAAAATCTTTGAATGTAGGAATATTTATGTTCAATGATATATTTATAAACCATGAAACCCAACTAAAGATTAGGTTCGATCTCAATTATTTATGAACTTGTCTTCTGTATTAAAATTTGTATAATTAGTTATTATTCTATCTTATTTTCCATATTATATATATTTTTATGTGTAGGAAACAGAAACAAAAATCTTTGAATCTAGGAATAACAAGAGACATTTACTATGTGCAGTATATAAGTTGTAATTATAAACAGGTTGTTTTAACTTGCTCCTTTGTAGAGTTTAGAAAGTTATAGATCCAATTTCATATAATTAATGAACTTTTATGTATATATCTTAATTTAACCAAAATCAAATGTGTTTATAGCCTGAATTACTATATTTCTGAATTGCTTTTGCACTTCAAAATTAGGCTACACAAAACCAATAAGCTGTTATTAAAACAAATTATATATCTAGCTATGATGTGCTAATGTACATCTTTCTATAACTCTTATACCTTCTTCTCCCTTTGACCAATGGGAGGATTCTCTTGCAACTTCTTTGTTTTGGGCCATTGCTCTCTTTTTGTAAATTTCATACGCCAGTATAATTTGTTTACTATTTTTCCTTAAAAAATTGTTTGCTATGGGATCCATTTGGTTCAGTGAATTGAAAAGTATACCATGAAATAATTCCAATATCAGTAAGTATATGTAATCATTGAACAAATTTTAGATTGCATCCTAAACAGGCCTTAAATAACTCAAAACTACTATAGTGAAACTTAAGAGCTTGAATACTTTGGTGGGGTGTGGTAATCCAATGGGAAGACGACAGTCTACAGTATTACTTTATGTAAAATAATGGTTGCACCCGGACTTCATCCACCTTCCACTTTAATTCTAATTCATTATTGCTCTTTCTTGGGAGGTATTTATGTTGCCAAATTTTCAGTATATTGCTAATAACTGATGACATAGATTCATGGTTATTAGCTGCTGTATAGCTGGAATCTTTTGATTGTTTCACTTCCAATACTAGTGTGAATGGATATGCTGTATTTTCAATATTAAACCTGAATTTTACTTATGTTTTTGACAGTTTATTCTTAATAATATTGTTTTGGTGCTAAACTTATCTTGACTTCTGCAGCTAGTTCCGCTCCTCCACCTGCACCTGTACAAGGTGGTGGTGGTGGTGGTTCATTGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTGAGTTTAGGAAGCACATGTTCTTTCTGTTTCTACAATTAATCATTTCAATGCCATTGTAACCGTGTCTTTTTTTGTGCTGATGTGCAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTTGATGCCGTAATGGGTCCTCGAACCATCCAGCATGAGACCATTGATTCATCAGCTTCCTCAGCATCTCCGGTAGCAAGCAATTCTGGTGGTTCTGATGCTTGTACTGTTCAGTCAAAGTCCTTTCAAGATGTATGTTCCTTGTTTCTCCATTGTTATTTACCATGACTTTTGGAGGCTGAAGCCATTGTTTGCCTCATCATACTCGACCAACTTCCATTTTCTTTAACCTTTTCTTTCTTTGCAGTGCCTGAACCACTACGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAAAATAATTGGTTTTTAGAACAATCATTTATTCACTCCTTTTCATTTGGATGTAACCGCAAGGAGCGGTGTCAAGTTTATTGTGTGTTTTGACAGTGTTTTCACTTTACGGCTACTTCTCTACAACTATAAAATGGTGTTTAATGATGAAACGCTTCATCATTTGGACTCAATTGTTATGGCTTTTGAGTTTTGGGTCTTCCCTTGAGAATTTAAAAATGATGTTTGGATTTTTAAACATCTACTTGATGAATAATGCAAAAATTAACTGTATTGAATACAGTCGCACACATACAGAAGATCTAATATGCCTGTGTAATTGGCTTTTGTCTAATTCAATATATTAGACAGCTATGTGTATTTTCTTTTTAAACGCTCAAATATTTCTATTTTATTAAGTTTAGGTTGATGTGAATTAGAACCCCCGAAAACCCCGAAACCGACGAAATTTGAAGTTAAAGGTTAAAATGAATTAACGAATGCCCAAGTATTGAGGTTAAGTTGAAGAATTTAAAAATATAGGGTCGTTTGGGTGG

mRNA sequence

GCAGTTGTGAAAACAGAAAAGAGGGGAAAGAACATTCGAGAATAGTTCGTTGGTCTCATCTAGGTTCGCTTGTGGTGCAAAAAGAGGAAAATAGAACCACGTGGCCATCTCCAATTGGTAGATTACGTGATTTTTGTATTTGTCAACTCGCTGTTTAGAAAACTAAACGGAAACTCCTAGAATCTGGGTCCCTATATAAACCCCAATAAAGTGGAATTCGACCGCAAATTAGTAACCCTAAAATTTCAGATCTCATTACTGCAAGAGACATCTACCGCCATTCTTTTACTTTTCTTCTACGCAGTCGCCCTATCTTATAATCCTTAACCATGCCTCGTCGTAGCTCCGGTGGACGATCTGCTCCCCGTCCCGCCCCTCGCGCTCCTCTTCGCAATCCACCGGCGCCAGCTAGTTCCGCTCCTCCACCTGCACCTGTACAAGGTGGTGGTGGTGGTGGTTCATTGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTTGATGCCGTAATGGGTCCTCGAACCATCCAGCATGAGACCATTGATTCATCAGCTTCCTCAGCATCTCCGGTAGCAAGCAATTCTGGTGGTTCTGATGCTTGTACTGTTCAGTCAAAGTCCTTTCAAGATTGCCTGAACCACTACGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAAAATAATTGGTTTTTAGAACAATCATTTATTCACTCCTTTTCATTTGGATGTAACCGCAAGGAGCGGTGTCAAGTTTATTGTGTGTTTTGACAGTGTTTTCACTTTACGGCTACTTCTCTACAACTATAAAATGGTGTTTAATGATGAAACGCTTCATCATTTGGACTCAATTGTTATGGCTTTTGAGTTTTGGGTCTTCCCTTGAGAATTTAAAAATGATGTTTGGATTTTTAAACATCTACTTGATGAATAATGCAAAAATTAACTGTATTGAATACAGTCGCACACATACAGAAGATCTAATATGCCTGTGTAATTGGCTTTTGTCTAATTCAATATATTAGACAGCTATGTGTATTTTCTTTTTAAACGCTCAAATATTTCTATTTTATTAAGTTTAGGTTGATGTGAATTAGAACCCCCGAAAACCCCGAAACCGACGAAATTTGAAGTTAAAGGTTAAAATGAATTAACGAATGCCCAAGTATTGAGGTTAAGTTGAAGAATTTAAAAATATAGGGTCGTTTGGGTGG

Coding sequence (CDS)

ATGCCTCGTCGTAGCTCCGGTGGACGATCTGCTCCCCGTCCCGCCCCTCGCGCTCCTCTTCGCAATCCACCGGCGCCAGCTAGTTCCGCTCCTCCACCTGCACCTGTACAAGGTGGTGGTGGTGGTGGTTCATTGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTTGATGCCGTAATGGGTCCTCGAACCATCCAGCATGAGACCATTGATTCATCAGCTTCCTCAGCATCTCCGGTAGCAAGCAATTCTGGTGGTTCTGATGCTTGTACTGTTCAGTCAAAGTCCTTTCAAGATTGCCTGAACCACTACGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAA

Protein sequence

MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

Homology

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BLAST of PI0013018 vs. ExPASy TrEMBL
Match: A0A0A0LNY2 (CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370390 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63
Identity = 137/145 (94.48%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSA RPAPRAPLRNPPAPAS APPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGS 120
           TGSAVAHRAVDAVMGPRTIQHET+DSSASSA  VASNSGGSDAC VQSKSFQDCLNHYGS
Sbjct: 61  TGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGS 120

Query: 121 DISKCQFYLDMLQECRRSSGSVLGA 146
           DISKCQFYLDMLQECRRSSGSVLGA
Sbjct: 121 DISKCQFYLDMLQECRRSSGSVLGA 144

[Close]

BLAST of PI0013018 vs. ExPASy TrEMBL
Match: A0A5A7VFK2 (Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004400 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.0e-63
Identity = 136/145 (93.79%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSAPRPA RAP RNPPAP +SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSAPRPAARAPARNPPAPVNSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGS 120
           TGSAVAHRAVDAVMGPRTIQHETIDSSASSA  VASNSGGSDAC VQSKSFQDCLNHYGS
Sbjct: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGS 120

Query: 121 DISKCQFYLDMLQECRRSSGSVLGA 146
           DISKCQFYLDMLQECRRSSGSVLGA
Sbjct: 121 DISKCQFYLDMLQECRRSSGSVLGA 144

[Close]

BLAST of PI0013018 vs. ExPASy TrEMBL
Match: A0A1S3BAZ1 (uncharacterized protein C6C3.02c-like OS=Cucumis melo OX=3656 GN=LOC103488112 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62
Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSAPRPA RAP RNPPAP +SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSAPRPAARAPARNPPAPVNSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGS 120
           TGSAVAHRAVDAVMGPRTIQHETIDSSASSA  VA+NSGGSDAC VQSKSFQDCLNHYGS
Sbjct: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGS 120

Query: 121 DISKCQFYLDMLQECRRSSGSVLGA 146
           DISKCQFYLDMLQECRRSSGSVLGA
Sbjct: 121 DISKCQFYLDMLQECRRSSGSVLGA 144

[Close]

BLAST of PI0013018 vs. ExPASy TrEMBL
Match: A0A6J1HDK4 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462950 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 130/146 (89.04%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSA RPAPRAP RN PAPA SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSASRPAPRAPPRNTPAPAHSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSGGSDACTVQSKSFQDCLNHYG 120
           TGSAVAHRAVDAVMGPR IQHET+DSS  S++P VASN GGSDAC VQSKSFQDCLNHYG
Sbjct: 61  TGSAVAHRAVDAVMGPRVIQHETVDSSTPSSAPSVASNPGGSDACNVQSKSFQDCLNHYG 120

Query: 121 SDISKCQFYLDMLQECRRSSGSVLGA 146
           SDISKCQFYLDMLQECR+SSGSVLGA
Sbjct: 121 SDISKCQFYLDMLQECRKSSGSVLGA 145

[Close]

BLAST of PI0013018 vs. ExPASy TrEMBL
Match: A0A6J1K966 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111492237 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.5e-58
Identity = 129/146 (88.36%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSA RPAPRAP RN PAPA+SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSASRPAPRAPPRNTPAPANSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSGGSDACTVQSKSFQDCLNHYG 120
           TGSAVAHRAVDAVMGPR IQHET+DSS  S++P VA N GGSDAC VQSKSFQDCLNHYG
Sbjct: 61  TGSAVAHRAVDAVMGPRVIQHETVDSSTPSSAPSVAINPGGSDACNVQSKSFQDCLNHYG 120

Query: 121 SDISKCQFYLDMLQECRRSSGSVLGA 146
           SDISKCQFYLDMLQECR+SSGSVLGA
Sbjct: 121 SDISKCQFYLDMLQECRKSSGSVLGA 145

[Close]

BLAST of PI0013018 vs. NCBI nr
Match: XP_011649682.1 (hemiasterlin resistant protein 1 [Cucumis sativus] >KGN62739.1 hypothetical protein Csa_022490 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 3.3e-63
Identity = 137/145 (94.48%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSA RPAPRAPLRNPPAPAS APPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGS 120
           TGSAVAHRAVDAVMGPRTIQHET+DSSASSA  VASNSGGSDAC VQSKSFQDCLNHYGS
Sbjct: 61  TGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGS 120

Query: 121 DISKCQFYLDMLQECRRSSGSVLGA 146
           DISKCQFYLDMLQECRRSSGSVLGA
Sbjct: 121 DISKCQFYLDMLQECRRSSGSVLGA 144

[Close]

BLAST of PI0013018 vs. NCBI nr
Match: XP_038886373.1 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 4.3e-63
Identity = 137/145 (94.48%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSA RPAPRAPLRNPPAPASSAPPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSASRPAPRAPLRNPPAPASSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGS 120
           TGSAVAHRAVDAVMGPRTIQHETIDSS SSA  VA+N GGSDACTVQSKSFQDCLNHYGS
Sbjct: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSTSSAPSVANNPGGSDACTVQSKSFQDCLNHYGS 120

Query: 121 DISKCQFYLDMLQECRRSSGSVLGA 146
           DISKCQFYLDMLQECRRSSGSVLGA
Sbjct: 121 DISKCQFYLDMLQECRRSSGSVLGA 144

[Close]

BLAST of PI0013018 vs. NCBI nr
Match: KAA0065106.1 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa])

HSP 1 Score: 249.6 bits (636), Expect = 1.6e-62
Identity = 136/145 (93.79%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSAPRPA RAP RNPPAP +SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSAPRPAARAPARNPPAPVNSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGS 120
           TGSAVAHRAVDAVMGPRTIQHETIDSSASSA  VASNSGGSDAC VQSKSFQDCLNHYGS
Sbjct: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGS 120

Query: 121 DISKCQFYLDMLQECRRSSGSVLGA 146
           DISKCQFYLDMLQECRRSSGSVLGA
Sbjct: 121 DISKCQFYLDMLQECRRSSGSVLGA 144

[Close]

BLAST of PI0013018 vs. NCBI nr
Match: XP_008444901.1 (PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 3.7e-62
Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSAPRPA RAP RNPPAP +SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSAPRPAARAPARNPPAPVNSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGS 120
           TGSAVAHRAVDAVMGPRTIQHETIDSSASSA  VA+NSGGSDAC VQSKSFQDCLNHYGS
Sbjct: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGS 120

Query: 121 DISKCQFYLDMLQECRRSSGSVLGA 146
           DISKCQFYLDMLQECRRSSGSVLGA
Sbjct: 121 DISKCQFYLDMLQECRRSSGSVLGA 144

[Close]

BLAST of PI0013018 vs. NCBI nr
Match: XP_022962551.1 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata] >XP_023545354.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita pepo subsp. pepo] >KAG7029663.1 SPAC6C3.02c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 130/146 (89.04%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           MPRRSSGGRSA RPAPRAP RN PAPA SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFG
Sbjct: 1   MPRRSSGGRSASRPAPRAPPRNTPAPAHSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSGGSDACTVQSKSFQDCLNHYG 120
           TGSAVAHRAVDAVMGPR IQHET+DSS  S++P VASN GGSDAC VQSKSFQDCLNHYG
Sbjct: 61  TGSAVAHRAVDAVMGPRVIQHETVDSSTPSSAPSVASNPGGSDACNVQSKSFQDCLNHYG 120

Query: 121 SDISKCQFYLDMLQECRRSSGSVLGA 146
           SDISKCQFYLDMLQECR+SSGSVLGA
Sbjct: 121 SDISKCQFYLDMLQECRKSSGSVLGA 145

[Close]

BLAST of PI0013018 vs. TAIR 10
Match: AT5G64400.1 (CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 174.5 bits (441), Expect = 6.3e-44
Identity = 93/145 (64.14%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           M RRSSGGRSAPRP P A     P P   APPPAP Q  GGGG +  G+G+TIAQGMAFG
Sbjct: 1   MGRRSSGGRSAPRPRPAAARSPAPQPVHRAPPPAPAQASGGGGGMFSGIGSTIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYGS 120
           TGSAVAHRAVD+VMGPRTIQHE ++++++SA+P A ++  S  C + +K+FQDC+  YGS
Sbjct: 61  TGSAVAHRAVDSVMGPRTIQHEAVEAASASAAP-AGSAMLSSTCDIHAKAFQDCIGSYGS 120

Query: 121 DISKCQFYLDMLQECRRSSGSVLGA 146
           +ISKCQFY+DML ECR++SGSV+GA
Sbjct: 121 EISKCQFYMDMLSECRKNSGSVIGA 144

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BLAST of PI0013018 vs. TAIR 10
Match: AT5G09570.1 (Cox19-like CHCH family protein )

HSP 1 Score: 141.0 bits (354), Expect = 7.7e-34
Identity = 81/146 (55.48%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPA-SSAPPPAPVQGGGGGGSLLGGLGATIAQGMAF 60
           MPR SSGGRS+ RP+  A  R+PP  + + APPPA  Q    GGS LG +GA+I +G+A+
Sbjct: 1   MPRGSSGGRSSYRPSRPAAARSPPPQSVNRAPPPATAQ-PSSGGSFLGNIGASITEGLAW 60

Query: 61  GTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQDCLNHYG 120
           GTG+A  HR VD+VMGPRT +HET+ S   SA+   +      AC + SK+FQDC+NH+G
Sbjct: 61  GTGTAFGHRVVDSVMGPRTFKHETVVSQVPSAANTMT------ACDIHSKAFQDCVNHFG 120

Query: 121 SDISKCQFYLDMLQECRRSSGSVLGA 146
           SDISKCQFY+DML EC+++SGSV+ A
Sbjct: 121 SDISKCQFYMDMLSECKKNSGSVVAA 139

[Close]

BLAST of PI0013018 vs. TAIR 10
Match: AT5G64400.2 (BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 127 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 9; Metazoa - 16; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 70/113 (61.95%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFG 60
           M RRSSGGRSAPRP P A     P P   APPPAP Q  GGGG +  G+G+TIAQGMAFG
Sbjct: 1   MGRRSSGGRSAPRPRPAAARSPAPQPVHRAPPPAPAQASGGGGGMFSGIGSTIAQGMAFG 60

Query: 61  TGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKSFQD 114
           TGSAVAHRAVD+VMGPRTIQHE ++++++SA+P A ++  S  C + +K+FQD
Sbjct: 61  TGSAVAHRAVDSVMGPRTIQHEAVEAASASAAP-AGSAMLSSTCDIHAKAFQD 112

The following BLAST results are available for this feature:

BLAST of PI0013018 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013018 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNY2	1.6e-63	94.48	CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370390 PE=4 S...	[more]
A0A5A7VFK2	8.0e-63	93.79	Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 OS=Cucumis melo...	[more]
A0A1S3BAZ1	1.8e-62	93.10	uncharacterized protein C6C3.02c-like OS=Cucumis melo OX=3656 GN=LOC103488112 PE...	[more]
A0A6J1HDK4	1.2e-58	89.04	coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial ...	[more]
A0A6J1K966	3.5e-58	88.36	coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-...	[more]

BLAST of PI0013018 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649682.1	3.3e-63	94.48	hemiasterlin resistant protein 1 [Cucumis sativus] >KGN62739.1 hypothetical prot...	[more]
XP_038886373.1	4.3e-63	94.48	coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-...	[more]
KAA0065106.1	1.6e-62	93.79	coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo v...	[more]
XP_008444901.1	3.7e-62	93.10	PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]	[more]
XP_022962551.1	2.5e-58	89.04	coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial ...	[more]

BLAST of PI0013018 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64400.1	6.3e-44	64.14	CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana...	[more]
AT5G09570.1	7.7e-34	55.48	Cox19-like CHCH family protein	[more]
AT5G64400.2	1.1e-27	61.95	BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010625	CHCH	PFAM	PF06747	CHCH	coord: 104..137 e-value: 3.3E-8 score: 33.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR13523	COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77	coord: 1..139
None	No IPR available	PANTHER	PTHR13523:SF16	SUBFAMILY NOT NAMED	coord: 1..139
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	47072	Cysteine alpha-hairpin motif	coord: 101..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013018.1	PI0013018.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007005	mitochondrion organization
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus