PI0013016 (gene) Melon (PI 482460) v1

Overview


Name	PI0013016
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	MADS-box domain-containing protein
Location	chr06: 17574952 .. 17575593 (+)
RNA-Seq Expression	PI0013016
Synteny	PI0013016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGAGGAATATTGAGTCTTAAACTCATTCCCAATCCCAAAAGTCGAAGAACAACCTTTCTTAAGAGGAAGAAAAGTCTGATGAAGAAGGCCTACGAGCTTTCCACCCTTTGTGATGTTCAAACTTGCCTTTTCATTGCTTCTAACTGTGACCCCTCCACTCACTTTGAAACTTGGCCTCCCAATCACCACCAAATCCACCATATGATCCGTTCTTATAAATCCCACTCTTTCACCAAACCCAACTCCTCTTATGATCTTAACCGCTTCTTCTCTGATCGCAAGAACAAAATCCTAACTGACACATCTAAACTTCTCCACAATGTTGAGGACCAATCCGAACATCAATTGATGGAGTTGTTGGCTGCTTTGGATTCCAAGATTAGAGTTGCAAACAACATGATTCAGTTCATGGAAGCCGATTATGATCACTTGATTGACCAAGCAATTGGCATGGATACACCTCCTTCCCAAACAGAGGATGAGGAACCCACTCAATTTGACATTTTCGACTTTTTGACGGAGCCAGATGAGTTTGAAGAATACAATATCGAGGGTTTCCAATCTCTGTTTGAGGACGAGTTTCTGGGAACGCTGGTTCAGAATAATCCCATTCCAGACTTTGATTTTGATTACTAA

mRNA sequence

ATGGGGAGAGGAATATTGAGTCTTAAACTCATTCCCAATCCCAAAAGTCGAAGAACAACCTTTCTTAAGAGGAAGAAAAGTCTGATGAAGAAGGCCTACGAGCTTTCCACCCTTTGTGATGTTCAAACTTGCCTTTTCATTGCTTCTAACTGTGACCCCTCCACTCACTTTGAAACTTGGCCTCCCAATCACCACCAAATCCACCATATGATCCGTTCTTATAAATCCCACTCTTTCACCAAACCCAACTCCTCTTATGATCTTAACCGCTTCTTCTCTGATCGCAAGAACAAAATCCTAACTGACACATCTAAACTTCTCCACAATGTTGAGGACCAATCCGAACATCAATTGATGGAGTTGTTGGCTGCTTTGGATTCCAAGATTAGAGTTGCAAACAACATGATTCAGTTCATGGAAGCCGATTATGATCACTTGATTGACCAAGCAATTGGCATGGATACACCTCCTTCCCAAACAGAGGATGAGGAACCCACTCAATTTGACATTTTCGACTTTTTGACGGAGCCAGATGAGTTTGAAGAATACAATATCGAGGGTTTCCAATCTCTGTTTGAGGACGAGTTTCTGGGAACGCTGGTTCAGAATAATCCCATTCCAGACTTTGATTTTGATTACTAA

Coding sequence (CDS)

ATGGGGAGAGGAATATTGAGTCTTAAACTCATTCCCAATCCCAAAAGTCGAAGAACAACCTTTCTTAAGAGGAAGAAAAGTCTGATGAAGAAGGCCTACGAGCTTTCCACCCTTTGTGATGTTCAAACTTGCCTTTTCATTGCTTCTAACTGTGACCCCTCCACTCACTTTGAAACTTGGCCTCCCAATCACCACCAAATCCACCATATGATCCGTTCTTATAAATCCCACTCTTTCACCAAACCCAACTCCTCTTATGATCTTAACCGCTTCTTCTCTGATCGCAAGAACAAAATCCTAACTGACACATCTAAACTTCTCCACAATGTTGAGGACCAATCCGAACATCAATTGATGGAGTTGTTGGCTGCTTTGGATTCCAAGATTAGAGTTGCAAACAACATGATTCAGTTCATGGAAGCCGATTATGATCACTTGATTGACCAAGCAATTGGCATGGATACACCTCCTTCCCAAACAGAGGATGAGGAACCCACTCAATTTGACATTTTCGACTTTTTGACGGAGCCAGATGAGTTTGAAGAATACAATATCGAGGGTTTCCAATCTCTGTTTGAGGACGAGTTTCTGGGAACGCTGGTTCAGAATAATCCCATTCCAGACTTTGATTTTGATTACTAA

Protein sequence

MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETWPPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVEDQSEHQLMELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTPPSQTEDEEPTQFDIFDFLTEPDEFEEYNIEGFQSLFEDEFLGTLVQNNPIPDFDFDY

Homology

[Close]

BLAST of PI0013016 vs. ExPASy Swiss-Prot
Match: Q9FIM0 (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 54/175 (30.86%), Postives = 83/175 (47.43%), Query Frame = 0


Query: 5   ILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPS----THFETW 64
           ++ L+ I N K+R TT+ KRK SL KKA E STLC V+TCL +      +    +  E W
Sbjct: 5   VVDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIW 64

Query: 65  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSD--RKNKILTDT--------SKLLHNV 124
           P +  ++  +IR YK    T      ++  F +D  + N+++T          S     +
Sbjct: 65  PKDETKVRAIIRKYKDTVSTSCRKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEKL 124

Query: 125 EDQSEHQLMELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTP-PSQTEDEE 165
           +  S  QL  +  A+DSK+   N  +   E     +  QA  MDTP P    D++
Sbjct: 125 DKCSREQLHGIFCAVDSKL---NEAVTRQERSMFRVNHQA--MDTPFPQNLMDQQ 174

[Close]

BLAST of PI0013016 vs. ExPASy Swiss-Prot
Match: Q38694 (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah OX=29714 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.1e-08
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 1  MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASN 51
          MGRG + LK+I N  +R+ TF KR+K L+KKAYELS LCD +  L I SN
Sbjct: 1  MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSN 50

[Close]

BLAST of PI0013016 vs. ExPASy Swiss-Prot
Match: P29383 (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana OX=3702 GN=AGL3 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 47/129 (36.43%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  L I SN      F + 
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVE---DQSEHQ 120
           P     +   +  Y+ HS+    ++ D N+   D ++K   D  KL   VE       H 
Sbjct: 61  PSG---MARTVDKYRKHSY----ATMDPNQSAKDLQDK-YQDYLKLKSRVEILQHSQRHL 120

Query: 121 LMELLAALD 127
           L E L+ +D
Sbjct: 121 LGEELSEMD 121

[Close]

BLAST of PI0013016 vs. ExPASy Swiss-Prot
Match: Q40872 (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.2e-07
Identity = 47/157 (29.94%), Postives = 73/157 (46.50%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           +GRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  L +      ST    +
Sbjct: 17  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----STRGRLY 76

Query: 61  PPNHHQIHHMIRSYKSHSFTKPNSS--YDLN-RFFSDRKNKILTDTSKLLHNVEDQSEHQ 120
              ++ +   I  YK      PN+S   + N +F+    +K+  + S +  N  +     
Sbjct: 77  EYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGES 136

Query: 121 LMEL----LAALD-------SKIRVANNMIQFMEADY 144
           L  L    L  L+       S+IR   N + F E +Y
Sbjct: 137 LGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEY 168

[Close]

BLAST of PI0013016 vs. ExPASy Swiss-Prot
Match: F6I457 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-07
Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  L +      S+    +
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----SSRGRVY 60

Query: 61  PPNHHQIHHMIRSYK--SHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVEDQSEHQL 120
             +++ I   I  YK  S   T   S+ ++N  +  +++  L    ++L N    + H +
Sbjct: 61  EYSNNNIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQN---SNRHLM 120

Query: 121 MELLAALDSK 129
            + LA+L  K
Sbjct: 121 GDSLASLTVK 122

[Close]

BLAST of PI0013016 vs. ExPASy TrEMBL
Match: A0A0A0LAL9 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.1e-104
Identity = 193/214 (90.19%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRGILSLKLIPNPKSRRTTFLKRKKSL+KKAYELSTLCDVQTCLFIAS+CDPSTHFETW
Sbjct: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETW 60

Query: 61  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVED-QSEHQLM 120
           PPNHHQIH MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILT+TSKLLHNV D QSEHQLM
Sbjct: 61  PPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTNTSKLLHNVVDHQSEHQLM 120

Query: 121 ELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTPPSQTEDEEPTQFDIFDFLTEPDE 180
           ELL ALDSKIRVAN+MI+FMEADYDHLIDQAIGMDTPPSQTEDEE TQF++ D   EPDE
Sbjct: 121 ELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNVSDLFNEPDE 180

Query: 181 FEEYNIEGFQSLFEDEFLGTLVQNNPIPDFDFDY 214
           FEEYN+EGFQSL ED+FL TLVQNNPIPDFDFD+
Sbjct: 181 FEEYNVEGFQSLLEDKFLETLVQNNPIPDFDFDF 214

[Close]

BLAST of PI0013016 vs. ExPASy TrEMBL
Match: A0A6J1F370 (agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-43
Identity = 116/205 (56.59%), Postives = 139/205 (67.80%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG LSLKLI NPKSRRTTF KRKKSLMKKAYELSTLCDVQTC+ IAS       FETW
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASE-----EFETW 60

Query: 61  PPNHHQIHHMIRSYKSHSFTKPN--SSYDLNRFFSDRKNKILTDTSKLL----------- 120
           P +  Q+  MIRSYKS SF K +  SSYDLN+FFSDRKNKI+T+TSKL            
Sbjct: 61  PSDRTQVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNS 120

Query: 121 -HNVEDQSEHQLMELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTPPSQ----TED 180
            H ++  SEHQL  L+A LDSKI VA++MI+FMEADYD+LI+ A+ + +   Q     E 
Sbjct: 121 DHCLDSLSEHQLKALMATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQIFSPLET 180

Query: 181 EEPTQFDIFDFLTEPDEFEEYNIEG 188
           E   + +I +   E +   +Y IEG
Sbjct: 181 EASPELNISELGMEAN--YDYLIEG 198

[Close]

BLAST of PI0013016 vs. ExPASy TrEMBL
Match: A0A5D3DXK1 (Agamous-like MADS-box protein AGL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00710 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 5.5e-36
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 70  MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVED-QSEHQLMELLAALDSK 129
           MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILT TSKLLHNV D QS++QL+ELLAALDSK
Sbjct: 1   MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTHTSKLLHNVRDHQSKYQLVELLAALDSK 60

Query: 130 IRVANNMIQFMEADYDHLIDQAIGMDTPPSQTEDEE 165
           I V NNMI+FMEADYD LIDQA+GMDT PSQTEDEE
Sbjct: 61  ISVGNNMIEFMEADYDDLIDQAVGMDTSPSQTEDEE 96

[Close]

BLAST of PI0013016 vs. ExPASy TrEMBL
Match: A0A5A7U2J6 (Agamous-like MADS-box protein AGL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00930 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.4e-23
Identity = 63/99 (63.64%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 135 MIQFMEADYDHLIDQAIGMDTPPSQTEDEEPTQFDIFDFLTEPD---------------- 194
           MI+FMEADYD LIDQA+GMDTPP QTEDEE TQF IF+FL EPD                
Sbjct: 1   MIEFMEADYDDLIDQAVGMDTPPFQTEDEETTQFKIFNFLNEPDEFEDEETIEFNISDFL 60

Query: 195 ----EFEEYNIEGFQSLFEDEFLGTLVQNNPIPDFDFDY 214
               EFEEY++EGFQSL +DEFL TLVQNNPI + DFDY
Sbjct: 61  NDPNEFEEYDVEGFQSLLQDEFLETLVQNNPILNIDFDY 99

[Close]

BLAST of PI0013016 vs. ExPASy TrEMBL
Match: A0A6J1J5U6 (agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.3e-23
Identity = 92/246 (37.40%), Postives = 124/246 (50.41%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFI-----ASNCDP-- 60
           M RG LS  LI N KSR +TF +RK SLMKKAYELSTLCDV+TC+ I     A + DP  
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  -STHFETWPPNHHQIHHMIRSYKSHSFT-KPNSSYDLNRFFSDRKNKILTDTSKLLHNV- 120
            S  F TWP N  ++ HMI +YK+ +   +    +DL+ +FSDRK K++T+  K    V 
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNLQKRKCFDLSDYFSDRKRKLVTEMCKHREKVG 120

Query: 121 -----------EDQSEHQLMELLAALDSKIRVANNMIQFMEAD------------YDHLI 180
                      +  SE QL E +  LDS+I  A  MI FM+AD            Y++++
Sbjct: 121 KIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYENVV 180

Query: 181 DQAIGMDTP-----------------PSQTEDEEPTQFDIFDFLTEPDEFEEYNIEGFQS 197
                  TP                 P+  EDE    F+  ++L E DE E Y +  + +
Sbjct: 181 QMGGDSSTPVLSLVELESTDSLNSPNPNPDEDEIGCNFENLEYLLE-DEDENY-MALYAN 240

[Close]

BLAST of PI0013016 vs. NCBI nr
Match: XP_004145650.1 (agamous-like MADS-box protein AGL82 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103
Identity = 193/214 (90.19%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRGILSLKLIPNPKSRRTTFLKRKKSL+KKAYELSTLCDVQTCLFIAS+CDPSTHFETW
Sbjct: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETW 60

Query: 61  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVED-QSEHQLM 120
           PPNHHQIH MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILT+TSKLLHNV D QSEHQLM
Sbjct: 61  PPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTNTSKLLHNVVDHQSEHQLM 120

Query: 121 ELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTPPSQTEDEEPTQFDIFDFLTEPDE 180
           ELL ALDSKIRVAN+MI+FMEADYDHLIDQAIGMDTPPSQTEDEE TQF++ D   EPDE
Sbjct: 121 ELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNVSDLFNEPDE 180

Query: 181 FEEYNIEGFQSLFEDEFLGTLVQNNPIPDFDFDY 214
           FEEYN+EGFQSL ED+FL TLVQNNPIPDFDFD+
Sbjct: 181 FEEYNVEGFQSLLEDKFLETLVQNNPIPDFDFDF 214

[Close]

BLAST of PI0013016 vs. NCBI nr
Match: KAE8650565.1 (hypothetical protein Csa_011366 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103
Identity = 193/214 (90.19%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRGILSLKLIPNPKSRRTTFLKRKKSL+KKAYELSTLCDVQTCLFIAS+CDPSTHFETW
Sbjct: 35  MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETW 94

Query: 61  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVED-QSEHQLM 120
           PPNHHQIH MIRSYKSHSFTKPNSSYDLNRFFSDRKNKILT+TSKLLHNV D QSEHQLM
Sbjct: 95  PPNHHQIHQMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTNTSKLLHNVVDHQSEHQLM 154

Query: 121 ELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTPPSQTEDEEPTQFDIFDFLTEPDE 180
           ELL ALDSKIRVAN+MI+FMEADYDHLIDQAIGMDTPPSQTEDEE TQF++ D   EPDE
Sbjct: 155 ELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQTEDEETTQFNVSDLFNEPDE 214

Query: 181 FEEYNIEGFQSLFEDEFLGTLVQNNPIPDFDFDY 214
           FEEYN+EGFQSL ED+FL TLVQNNPIPDFDFD+
Sbjct: 215 FEEYNVEGFQSLLEDKFLETLVQNNPIPDFDFDF 248

[Close]

BLAST of PI0013016 vs. NCBI nr
Match: XP_038877825.1 (agamous-like MADS-box protein MADS1 [Benincasa hispida])

HSP 1 Score: 305.1 bits (780), Expect = 4.9e-79
Identity = 171/234 (73.08%), Postives = 184/234 (78.63%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG LSLKLIPN KSRRTTF+KRKKSLMKKAYELSTLCDVQTC+FIAS+CDPSTHFETW
Sbjct: 1   MGRGTLSLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60

Query: 61  PPNHHQIHHMIRSYKSHSFTK---PNSSYDLNRFFSDRKNKILTDTSKLLHNVEDQ---- 120
           PPNH QI+ MIRSYKS SF K    NSSY+L +FFSDRKNKILTDTSKL HNVED     
Sbjct: 61  PPNHDQINAMIRSYKSRSFPKHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVEDHHLDS 120

Query: 121 -SEHQLMELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTPPSQTEDEEPTQFDIFD 180
            SEHQL ELLA LDSKI VA+ MIQFM+ADYDHLI+QA GMDT PS+TE E  T+ DI +
Sbjct: 121 LSEHQLKELLATLDSKIGVADGMIQFMDADYDHLIEQAFGMDTLPSETE-EPTTECDISE 180

Query: 181 FLTEPDEFE--------------EYNIEGFQSLFEDEFLGTLVQNNPIPDFDFD 213
           FL EPDEFE              EYN+EGFQSL EDEFLGTLV NNP   F FD
Sbjct: 181 FLIEPDEFEYNVEGFQSPLEDEFEYNVEGFQSLLEDEFLGTLVLNNP---FKFD 230

[Close]

BLAST of PI0013016 vs. NCBI nr
Match: XP_038887166.1 (MADS-box protein SVP-like [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 6.2e-58
Identity = 134/203 (66.01%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG L+LKLIPN KSRRTTF+KRKKSLMKKAYELSTLCDVQTC+FIAS+CDPSTHFETW
Sbjct: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60

Query: 61  PPNHHQIHHMIRSYKSHSFTK-PNSSYDLNRFFSDRKNKILTDTSKLLHNV--------E 120
           PPNH QIH MIRSYKSHSF K   +SY+L++FFS R NKI T+TSKL HNV        +
Sbjct: 61  PPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRHLD 120

Query: 121 DQSEHQLMELLAALDSKIRVANNMIQFMEADYDHLIDQAIG---MDTP---PSQTEDEEP 180
             SEHQL ELLA+LDSKI V + MIQFMEADYDHLI++  G   +DTP   PS+T  +E 
Sbjct: 121 SLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDTPSFLPSET--KET 180

Query: 181 TQFDIFDFLTEPDEFEEYNIEGF 189
            + DI ++L   +   EYN+E F
Sbjct: 181 PELDITEWLIGTNGL-EYNVEEF 200

[Close]

BLAST of PI0013016 vs. NCBI nr
Match: XP_023526169.1 (agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-44
Identity = 109/174 (62.64%), Postives = 128/174 (73.56%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG LSLKLI NPKSRRTTF KRKKSLMKKAYELSTLCDVQTC+ IAS+      F+TW
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASD-----EFQTW 60

Query: 61  PPNHHQIHHMIRSYKSHSFTK--PNSSYDLNRFFSDRKNKILTDTSKLL----------- 120
           P + +Q+  MIRSYKS SF K    SSYDLN+FFSDRKNKI+T+TSKL            
Sbjct: 61  PSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNS 120

Query: 121 -HNVEDQSEHQLMELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTPPSQT 161
            H ++  SEHQL  LLA LDSKI VA++MI+FMEADYD+LI+ A+ + +   QT
Sbjct: 121 DHCLDSLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQT 169

[Close]

BLAST of PI0013016 vs. TAIR 10
Match: AT5G58890.1 (AGAMOUS-like 82 )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 54/175 (30.86%), Postives = 83/175 (47.43%), Query Frame = 0


Query: 5   ILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPS----THFETW 64
           ++ L+ I N K+R TT+ KRK SL KKA E STLC V+TCL +      +    +  E W
Sbjct: 5   VVDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIW 64

Query: 65  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSD--RKNKILTDT--------SKLLHNV 124
           P +  ++  +IR YK    T      ++  F +D  + N+++T          S     +
Sbjct: 65  PKDETKVRAIIRKYKDTVSTSCRKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEKL 124

Query: 125 EDQSEHQLMELLAALDSKIRVANNMIQFMEADYDHLIDQAIGMDTP-PSQTEDEE 165
           +  S  QL  +  A+DSK+   N  +   E     +  QA  MDTP P    D++
Sbjct: 125 DKCSREQLHGIFCAVDSKL---NEAVTRQERSMFRVNHQA--MDTPFPQNLMDQQ 174

[Close]

BLAST of PI0013016 vs. TAIR 10
Match: AT2G03710.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.4e-09
Identity = 47/129 (36.43%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  L I SN      F + 
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVE---DQSEHQ 120
           P     +   +  Y+ HS+    ++ D N+   D ++K   D  KL   VE       H 
Sbjct: 61  PSG---MARTVDKYRKHSY----ATMDPNQSAKDLQDK-YQDYLKLKSRVEILQHSQRHL 120

Query: 121 LMELLAALD 127
           L E L+ +D
Sbjct: 121 LGEELSEMD 121

[Close]

BLAST of PI0013016 vs. TAIR 10
Match: AT2G03710.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.4e-09
Identity = 47/129 (36.43%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  L I SN      F + 
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVE---DQSEHQ 120
           P     +   +  Y+ HS+    ++ D N+   D ++K   D  KL   VE       H 
Sbjct: 61  PSG---MARTVDKYRKHSY----ATMDPNQSAKDLQDK-YQDYLKLKSRVEILQHSQRHL 120

Query: 121 LMELLAALD 127
           L E L+ +D
Sbjct: 121 LGEELSEMD 121

[Close]

BLAST of PI0013016 vs. TAIR 10
Match: AT2G03710.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.4e-09
Identity = 47/129 (36.43%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHFETW 60
           MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  L I SN      F + 
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  PPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVE---DQSEHQ 120
           P     +   +  Y+ HS+    ++ D N+   D ++K   D  KL   VE       H 
Sbjct: 61  PSG---MARTVDKYRKHSY----ATMDPNQSAKDLQDK-YQDYLKLKSRVEILQHSQRHL 120

Query: 121 LMELLAALD 127
           L E L+ +D
Sbjct: 121 LGEELSEMD 121

[Close]

BLAST of PI0013016 vs. TAIR 10
Match: AT5G55690.1 (MADS-box transcription factor family protein )

HSP 1 Score: 55.5 bits (132), Expect = 6.2e-08
Identity = 40/146 (27.40%), Postives = 66/146 (45.21%), Query Frame = 0


Query: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLMKKAYELSTLCDVQTCLFIASNCDPSTHF--- 60
           MGR ++ +  I N K+R TT+ KRK  L KKA E STLC V TC+ +             
Sbjct: 1   MGRKMVKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDEMVME 60

Query: 61  -ETWPPNHHQIHHMIRSYKSHSFTKPNSSYDLNRFFSDRKNKILTDTSKLLHNVEDQ--- 120
            E WP +  ++  ++  Y+  + +    +Y +         K+   T    +   D+   
Sbjct: 61  PELWPKDGSKVREILTKYRDTASSSCTKTYTVQECLEKNNTKVEKPTIATKYPTWDKKLD 120

Query: 121 --SEHQLMELLAALDSKIRVANNMIQ 138
             S + L  +  A+++KI+ A N  Q
Sbjct: 121 QCSLNDLYAVFMAVENKIQEATNRNQ 146

The following BLAST results are available for this feature:

BLAST of PI0013016 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIM0	2.1e-08	30.86	Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=...	[more]
Q38694	6.1e-08	58.00	Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah OX=29714 PE=2 SV=1	[more]
P29383	1.0e-07	36.43	Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana OX=3702 GN=AGL3 PE=1 ...	[more]
Q40872	5.2e-07	29.94	Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1	[more]
F6I457	6.7e-07	31.54	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=...	[more]

BLAST of PI0013016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAL9	6.1e-104	90.19	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE...	[more]
A0A6J1F370	2.7e-43	56.59	agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717...	[more]
A0A5D3DXK1	5.5e-36	87.50	Agamous-like MADS-box protein AGL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7U2J6	2.4e-23	63.64	Agamous-like MADS-box protein AGL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1J5U6	5.3e-23	37.40	agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 ...	[more]

BLAST of PI0013016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145650.1	1.3e-103	90.19	agamous-like MADS-box protein AGL82 [Cucumis sativus]	[more]
KAE8650565.1	1.3e-103	90.19	hypothetical protein Csa_011366 [Cucumis sativus]	[more]
XP_038877825.1	4.9e-79	73.08	agamous-like MADS-box protein MADS1 [Benincasa hispida]	[more]
XP_038887166.1	6.2e-58	66.01	MADS-box protein SVP-like [Benincasa hispida]	[more]
XP_023526169.1	2.3e-44	62.64	agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0013016 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58890.1	1.5e-09	30.86	AGAMOUS-like 82	[more]
AT2G03710.1	7.4e-09	36.43	K-box region and MADS-box transcription factor family protein	[more]
AT2G03710.2	7.4e-09	36.43	K-box region and MADS-box transcription factor family protein	[more]
AT2G03710.3	7.4e-09	36.43	K-box region and MADS-box transcription factor family protein	[more]
AT5G55690.1	6.2e-08	27.40	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..142
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 3..159
None	No IPR available	PANTHER	PTHR11945:SF176	AGAMOUS-LIKE MADS-BOX PROTEIN AGL82	coord: 3..159
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 40.64 coord: 23..38 score: 65.84 coord: 38..59 score: 26.72
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..62 e-value: 3.1E-17 score: 73.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..50 e-value: 4.8E-16 score: 58.0
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 18.361984
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..100 e-value: 1.7E-17 score: 65.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..81
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..69 e-value: 1.01633E-22 score: 85.7747

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013016.1	PI0013016.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding